Os01g0108800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF936, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0108800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF936, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450.78 | 0.998 | 6.6 | -4.6 | 2.51 | 1.88 | -0.917 | 3.09 | 0.318 | 2.63 | 1007 | 5371 | -- | -- |
| 444.26 | 0.982 | 6.61 | -4.84 | 2.53 | 2.12 | -0.819 | -- | 0.374 | 2.63 | 1007 | 11988 | -- | -- |
| 446.1 | 0.984 | 6.6 | -4.57 | 2.54 | 1.66 | -- | 2.75 | 0.309 | 2.69 | 1007 | 11353 | -- | -- |
| 446.67 | 0.984 | 6.61 | -4.8 | 2.53 | 2.17 | -- | -- | 0.392 | 2.67 | 1007 | 11992 | -- | -- |
| 810.13 | 1.33 | 6.58 | -4.33 | -- | 1.58 | -- | 3.17 | 0.366 | -- | 1009 | 11113 | -- | -- |
| 536.22 | 1.09 | 6.68 | -4.49 | 2.5 | -- | -0.785 | -- | 0.0867 | 2.65 | -- | -- | -- | -- |
| 538.36 | 1.09 | 6.68 | -4.48 | 2.5 | -- | -- | -- | 0.0911 | 2.68 | -- | -- | -- | -- |
| 815.35 | 1.33 | 6.6 | -4.68 | -- | 2.11 | -- | -- | 0.453 | -- | 1007 | 11147 | -- | -- |
| 1031.84 | 1.5 | 6.41 | -- | 2.44 | 1.81 | -- | -- | 1.02 | 2.64 | 1006 | 17734 | -- | -- |
| 901.3 | 1.4 | 6.66 | -4.37 | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
| 1066.18 | 1.53 | 6.57 | -- | 2.41 | -- | -- | -- | 0.589 | 2.66 | -- | -- | -- | -- |
| 1368 | 1.72 | 6.5 | -- | -- | 1.11 | -- | -- | 0.885 | -- | 1005 | 17833 | -- | -- |
| 1404.77 | 1.75 | 6.55 | -- | -- | -- | -- | -- | 0.639 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 442.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 442.90 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 3 | 444.30 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 4 | 444.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 5 | 444.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 445.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 7 | 446.59 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 8 | 446.88 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 31 | 448.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 68 | 449.48 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 71 | 449.52 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 74 | 449.63 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 85 | 449.87 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 87 | 449.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 90 | 449.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 91 | 449.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 125 | 450.59 | atmosphere | 995.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 131 | 450.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 137 | 450.70 | atmosphere | 995.0 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 154 | 451.05 | atmosphere | 1005.0 | 4320 | < th | dose dependent | sin | 21 | NA |
| 194 | 451.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 395 | 453.33 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 23 | NA |
| 422 | 453.47 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 23 | NA |
| 453 | 453.63 | humidity | 90.0 | 30 | < th | dose independent | sin | 8 | NA |
| 637 | 454.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 829 | 455.03 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 22 | 5 |