Os11g0120200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF936, plant family protein.
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Os11g0120200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF936, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.01 | 0.711 | 4.59 | -1.07 | 2.06 | -1.48 | -0.634 | -0.786 | 0.0578 | 5.72 | 24.1 | 436 | -- | -- |
| 229.71 | 0.706 | 4.6 | -1.15 | 2.05 | -1.34 | -0.771 | -- | 0.0465 | 5.72 | 24.3 | 439 | -- | -- |
| 229.91 | 0.706 | 4.58 | -1.03 | 2.06 | -1.49 | -- | -1.01 | 0.0671 | 5.7 | 24.1 | 437 | -- | -- |
| 231.26 | 0.708 | 4.6 | -1.18 | 2.06 | -1.36 | -- | -- | 0.0364 | 5.73 | 24.3 | 443 | -- | -- |
| 425.06 | 0.96 | 4.61 | -0.972 | -- | -1.54 | -- | -1.41 | 0.083 | -- | 27.18 | 1290 | -- | -- |
| 256.46 | 0.751 | 4.55 | -0.832 | 1.94 | -- | -0.744 | -- | 0.287 | 5.66 | -- | -- | -- | -- |
| 257.82 | 0.752 | 4.55 | -0.835 | 1.93 | -- | -- | -- | 0.29 | 5.65 | -- | -- | -- | -- |
| 420.71 | 0.955 | 4.65 | -1.22 | -- | -1.42 | -- | -- | 0.0113 | -- | 28.5 | 1295 | -- | -- |
| 264.25 | 0.757 | 4.56 | -- | 2 | -0.876 | -- | -- | 0.248 | 5.7 | 24.27 | 410 | -- | -- |
| 451.5 | 0.993 | 4.58 | -0.774 | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
| 276.21 | 0.777 | 4.53 | -- | 1.92 | -- | -- | -- | 0.383 | 5.67 | -- | -- | -- | -- |
| 453.56 | 0.992 | 4.59 | -- | -- | -0.839 | -- | -- | 0.3 | -- | 35.29 | 1283 | -- | -- |
| 467.29 | 1.01 | 4.56 | -- | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 4 | 219.15 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 31 | 221.02 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 33 | 221.17 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 36 | 221.28 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 60 | 222.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 133 | 224.84 | temperature | 30.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 134 | 224.84 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 183 | 226.05 | temperature | 20.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 188 | 226.12 | temperature | 10.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 208 | 226.53 | temperature | 25.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 259 | 227.30 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 13 |
| 389 | 229.19 | temperature | 25.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 442 | 229.91 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 454 | 230.09 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 474 | 230.33 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 481 | 230.39 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 486 | 230.42 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 488 | 230.44 | temperature | 20.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 500 | 230.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 558 | 230.89 | temperature | 10.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 561 | 230.91 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 570 | 230.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 578 | 231.02 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 599 | 231.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 608 | 231.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 609 | 231.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 636 | 231.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 13 |
| 641 | 231.42 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 643 | 231.43 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 651 | 231.47 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 655 | 231.49 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 12 |
| 657 | 231.49 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 664 | 231.51 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 684 | 231.59 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 698 | 231.63 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 732 | 231.69 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 763 | 231.76 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 764 | 231.77 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 797 | 231.82 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 830 | 231.87 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 838 | 231.89 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 851 | 231.91 | temperature | 25.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 878 | 231.96 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 894 | 231.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 917 | 232.02 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 16 |
| 932 | 232.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 21 |