BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0482900 Os10g0482900|AK071332
(704 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0482900 Glutaredoxin domain containing protein 1176 0.0
Os06g0224200 Glutaredoxin domain containing protein 379 e-105
Os06g0692800 Protein of unknown function DUF547 domain cont... 77 3e-14
Os02g0153000 Protein of unknown function DUF547 domain cont... 74 3e-13
Os09g0463300 Protein of unknown function DUF547 domain cont... 73 7e-13
Os03g0859900 Protein of unknown function DUF547 domain cont... 70 4e-12
Os06g0704100 Protein of unknown function DUF547 domain cont... 70 4e-12
Os10g0559800 Protein of unknown function DUF547 domain cont... 67 4e-11
>Os10g0482900 Glutaredoxin domain containing protein
Length = 704
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/635 (91%), Positives = 584/635 (91%)
Query: 70 GLVVDGGEDVYYARRMLQGVVLRXXXXXXXXXXXXGLTRALSAPAPDGYVXXXXXQRPVE 129
GLVVDGGEDVYYARRMLQGVVLR GLTRALSAPAPDGYV QRPVE
Sbjct: 70 GLVVDGGEDVYYARRMLQGVVLRPPPHLPQPEAPPGLTRALSAPAPDGYVEEEEEQRPVE 129
Query: 130 RXXXXXXXXXXXXXXXXXIGRFFRDRRDVLSSAITRRISSLKEASSSPPPPVGMDTYGVQ 189
R IGRFFRDRRDVLSSAITRRISSLKEASSSPPPPVGMDTYGVQ
Sbjct: 130 RSASVNSAASAVVVDVASIGRFFRDRRDVLSSAITRRISSLKEASSSPPPPVGMDTYGVQ 189
Query: 190 EIHLPNVKVTVRLKDAIXXXXXXXXXXXXXXXXXYSFSGSHIKGRVSFFSRSGCRDCAAV 249
EIHLPNVKVTVRLKDAI YSFSGSHIKGRVSFFSRSGCRDCAAV
Sbjct: 190 EIHLPNVKVTVRLKDAIEADAEEDDAVGGGGDDGYSFSGSHIKGRVSFFSRSGCRDCAAV 249
Query: 250 RAFFRQSALPYVEINLDVFPEREAEFASRAGASARVPQIFLNEKLLGGLVVLNSLRNSGE 309
RAFFRQSALPYVEINLDVFPEREAEFASRAGASARVPQIFLNEKLLGGLVVLNSLRNSGE
Sbjct: 250 RAFFRQSALPYVEINLDVFPEREAEFASRAGASARVPQIFLNEKLLGGLVVLNSLRNSGE 309
Query: 310 FERRVRDLAGRRCPDTAPRVPVYGFDNDPGKEGGDREDAMVGIVRVLRHRLPIQDRIVRL 369
FERRVRDLAGRRCPDTAPRVPVYGFDNDPGKEGGDREDAMVGIVRVLRHRLPIQDRIVRL
Sbjct: 310 FERRVRDLAGRRCPDTAPRVPVYGFDNDPGKEGGDREDAMVGIVRVLRHRLPIQDRIVRL 369
Query: 370 KLVKNCFSGADMVDGIVNHLECSRKKAVEIGRELARKHFIHHVFRENDFEDGSQNLYRFL 429
KLVKNCFSGADMVDGIVNHLECSRKKAVEIGRELARKHFIHHVFRENDFEDGSQNLYRFL
Sbjct: 370 KLVKNCFSGADMVDGIVNHLECSRKKAVEIGRELARKHFIHHVFRENDFEDGSQNLYRFL 429
Query: 430 EHDPAIPKYYNFIRGATNDGEPKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASE 489
EHDPAIPKYYNFIRGATNDGEPKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASE
Sbjct: 430 EHDPAIPKYYNFIRGATNDGEPKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASE 489
Query: 490 EFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSSNFQY 549
EFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSSNFQY
Sbjct: 490 EFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSSNFQY 549
Query: 550 VVGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLELVQGKVNPLVHFGLCDATRSS 609
VVGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLELVQGKVNPLVHFGLCDATRSS
Sbjct: 550 VVGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLELVQGKVNPLVHFGLCDATRSS 609
Query: 610 PIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQDRETLKWI 669
PIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQDRETLKWI
Sbjct: 610 PIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQDRETLKWI 669
Query: 670 LNYLDPTKAGLLTHLLNDGGAINISYLNYDWSLNV 704
LNYLDPTKAGLLTHLLNDGGAINISYLNYDWSLNV
Sbjct: 670 LNYLDPTKAGLLTHLLNDGGAINISYLNYDWSLNV 704
>Os06g0224200 Glutaredoxin domain containing protein
Length = 711
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/477 (41%), Positives = 287/477 (60%), Gaps = 11/477 (2%)
Query: 232 KGRVSFFSRSGCRDCAAVRAFFRQSALPYVEINLDVFPEREAEFASRAGASARVPQIFLN 291
KGR+ +++ GC DC VR+F RQ L YVEIN+D+FP R+ E + G+S VP+++ N
Sbjct: 242 KGRIIIYTKLGCEDCKMVRSFMRQKMLKYVEINIDIFPSRKMELENNTGSST-VPKVYFN 300
Query: 292 EKLLGGLVVLNSLRNSGEFERRVRDLAGRRCPDTAPRVPVYGFDNDPGKEGGDREDAMVG 351
+ L+GGL L + SG + R L AP P+ G D++ G + D +
Sbjct: 301 DLLIGGLTELKKMEESGILDDRTDALFKDEPSSAAPLPPLPGEDDESG---SGKIDELAT 357
Query: 352 IVRVLRHRLPIQDRIVRLKLVKNCFSGADMVDGIVNHLECSRKKAVEIGRELARKHFIHH 411
IVR +R + ++DR +++ +CF G++ VD + R +AVE GR+LA K+F H
Sbjct: 358 IVRKMRESITLKDRFYKMRRFSSCFLGSEAVDFLSEDQYLERDEAVEFGRKLASKYFYRH 417
Query: 412 VFRENDFEDGSQNLYRFLEHDPAI-PKYYNFIRGATNDGEPKLAAAIGQRMTKIMVAILE 470
V E+ FEDG+ LYRFL++DP I + YN +G D EPK + R+ K+ + E
Sbjct: 418 VLDEDVFEDGNH-LYRFLDNDPIIMSQCYNIPKGII-DVEPKPIVEVASRLRKLSETMFE 475
Query: 471 AYASDDRRHLDYSRIAASEEFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAV 530
AY S+D +H+DY I EEF+RY +ELQRV+ L EE+L FF+NL+N MAIHA+
Sbjct: 476 AYVSEDGKHVDYRSIQGCEEFKRYVRTTEELQRVETHELSREEKLAFFINLYNMMAIHAL 535
Query: 531 VRVGQP-GAIDRRSS-SNFQYVVGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLE 588
V G P G +DRR +F+YV+GG YS++ I+NGILR N+R PY +AKPFG D+R +
Sbjct: 536 VTCGHPAGPLDRRKFFGDFKYVIGGCAYSMSAIQNGILRGNQRPPYNLAKPFGQKDQRSK 595
Query: 589 LVQGKVNPLVHFGLCDATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHL 648
+ PLVHF L T+S P +R +S ++ EL AAR F N G+ +D E++ +
Sbjct: 596 VALPYAEPLVHFALVCGTKSGPALRCYSPGNIDKELVEAARDFLRNVGIVVDPEAKVASV 655
Query: 649 TSIIKWYSVDFGQDR-ETLKWILNYLDPTKAGLLTHLLNDGGAINISYLNYDWSLNV 704
+ I++WYS DFG++ E LK NYL+P ++ LL + + + Y YDWSLN+
Sbjct: 656 SKILRWYSTDFGKNETEVLKHAANYLEPAESEQFLELLAN-TQLKVLYQPYDWSLNI 711
>Os06g0692800 Protein of unknown function DUF547 domain containing protein
Length = 654
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 487 ASEEFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSSN 546
ASE + + N+V++L +VD + + ERL F++NL+N + +HA + G P D + S
Sbjct: 415 ASEALKNFRNLVEQLSKVDPTCMTCAERLAFWINLYNTLIMHAYLAYGVPEN-DIKLFSL 473
Query: 547 FQ---YVVGGHPYSLATIRNGILRSNRRQPYTIAKP----------FGSSDKRLELVQGK 593
Q Y+VGG +S A I IL+ + P + +P F +++ +
Sbjct: 474 MQKACYIVGGQSFSAAEIEFVILK--MKTP--VHRPQLSLMLALHKFRVTEEHKKYSIDD 529
Query: 594 VNPLVHFGLCDATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIK 653
PLV FGL SSP VR FS V EL+ + R ++ V I+ +S + + +++
Sbjct: 530 AEPLVLFGLSCGMFSSPAVRIFSAGNVRQELQESMRD-YIRASVGIN-DSGKLIVPKLLQ 587
Query: 654 WYSVDFGQDRETLKWILNYLDPTKAG 679
Y+ +D WI +L P +
Sbjct: 588 SYAKGTVEDSLLADWICRHLTPNQVA 613
>Os02g0153000 Protein of unknown function DUF547 domain containing protein
Length = 454
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 471 AYASDDRRHLDYSRIAASEEFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAV 530
++ S + L+Y ASE +++ +V++L +V+ +++ +ERL F++NL+NA+ +HA
Sbjct: 196 SWMSVGKEQLEY----ASEALKKFRFLVEQLSKVNPNSMNCDERLAFWINLYNALIMHAY 251
Query: 531 VRVGQPGAIDRRSSSNFQ---YVVGGHPYSLATIRNGILRSN---RRQPYTIA---KPFG 581
+ G P D + S Q Y VGG +S A I IL+ R ++ F
Sbjct: 252 LAYGVPRN-DIKLFSLMQKACYTVGGQSFSAAEIEFVILKMKTPVHRPQLSLMLALNKFK 310
Query: 582 SSDKRLELVQGKVNPLVHFGLCDATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDL 641
+++ + PLV FGL SSP VR FS V EL+ + R ++ V I
Sbjct: 311 ITEEHKKYSIDGTEPLVLFGLSCGMFSSPAVRIFSAANVRQELQESLRD-YVQASVGISD 369
Query: 642 ESRTVHLTSIIKWYSVDFGQDRETLKWILNYLDPTKAGLL 681
+ + + +++ Y+ +D WI ++L P + ++
Sbjct: 370 RGKLL-IPKLLQSYAKGNVEDSLLADWICHHLTPDQVAVI 408
>Os09g0463300 Protein of unknown function DUF547 domain containing protein
Length = 580
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 26/194 (13%)
Query: 492 RRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPG------AIDRRSSS 545
R+ +++ L VD++ L +++L F++N++N+ ++A + G P A+ +++
Sbjct: 352 RKLKALIRRLSSVDLTGLSHQQKLAFWINIYNSCMMNAFLEQGIPTTPHMLVAMMPKATI 411
Query: 546 NFQYVVGGHPYSLATIRNGILRSNRRQPYTI--AKPFGSSDKRLELVQGK-------VNP 596
N VGG +S +I + ILR PY++ P G + + V + P
Sbjct: 412 N----VGGRTHSAMSIEHFILR----LPYSVKHVNPGGVTKGAADDVTMRGVFGLEWPEP 463
Query: 597 LVHFGLCDATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYS 656
LV F L + SSP VR ++ +GVE EL AA++ +L V + ++ V + ++ WY
Sbjct: 464 LVTFALSCGSWSSPAVRVYTARGVEEEL-EAAKRDYLQSAVVVSAPAK-VAIPKLLHWYL 521
Query: 657 VDFGQDRETL-KWI 669
+DF +D ++L W+
Sbjct: 522 LDFAKDVDSLMDWV 535
>Os03g0859900 Protein of unknown function DUF547 domain containing protein
Length = 546
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 497 MVQELQRVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPG------AIDRRSSSNFQYV 550
M++ LQ VD+ L ++L F+LN++N +H ++ G P A+ +++ N
Sbjct: 323 MLEALQHVDLRFLTHHQKLAFWLNIYNTCIMHGILHNGLPSNPEKLLALKNKATLN---- 378
Query: 551 VGGHPYSLATIRNGILRSNRRQPYTIAKPFGSSDKRLELVQ-------GKVNPLVHFGLC 603
V G + I N IL RQP ++ + F + +E Q P + F LC
Sbjct: 379 VSGQKLNALVIENFIL----RQPSSVKEEFWKCEVDVEEQQVRSRYGLNSSEPNILFALC 434
Query: 604 DATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQDR 663
RSSP +R + V +L A + +L + + R + + S+I DF +D
Sbjct: 435 CGNRSSPALRIYKADRVMMDLEKAKLE-YLQASLVVTSTRRRLMIPSLIHSNMHDFAKDL 493
Query: 664 ETL-KWILNYLDPTKAGLLTHLLN----DGGAINISYL 696
++L +WI + L PT L +++ G +NI +L
Sbjct: 494 DSLVRWICDQL-PTSWSLRKSMVDCLRWSGHRLNIHHL 530
>Os06g0704100 Protein of unknown function DUF547 domain containing protein
Length = 538
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 471 AYASDDRRHLDYSRIAASEEFRRYANMVQELQRVDMSALPAEERLPFFLNLHNAMAIHAV 530
++ S ++ L+Y A+E R++ ++++L V+ L + +L F++NL+NA+ +HA
Sbjct: 288 SWMSVGKKQLEY----AAESLRKFRLLIEQLAEVNPIHLGDDAKLAFWINLYNALMMHAY 343
Query: 531 VRVGQPGAIDRRSSSNFQ---YVVGGHPYSLATIRNGILR---SNRRQPYTI---AKPFG 581
+ G P + D + S Q Y +GGH +S A I IL+ N R + +
Sbjct: 344 LAYGVPRS-DIKLFSLMQKAAYTIGGHSFSAAFIEYVILKMKPPNHRPQMALLLALQKIK 402
Query: 582 SSDKRLELVQGKVNPLVHFGLCDATRSSPIVRFFSTQGVEPELRHAARKFFLNGGVEIDL 641
+++ + G PL+ F L SSP V+ ++ V EL+ A R F+ V +
Sbjct: 403 VPEEQKKFCIGSPEPLLTFALSCGLYSSPAVKIYTAGNVREELQDAQRD-FIRASVGVSR 461
Query: 642 ESRTVHLTSIIKWYSVDFGQDRETLKWILNYLDPTKAGLLTHLLN 686
+ + + + ++ ++ F D WI ++L +A + H ++
Sbjct: 462 KGKLL-VPKMLHCFARGFVDDNSFPIWISHFLPQQQATFVEHCVS 505
>Os10g0559800 Protein of unknown function DUF547 domain containing protein
Length = 645
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 25/276 (9%)
Query: 443 RGATNDGEPKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASEEFRRYANMVQELQ 502
R +TN P+ ++ + + S D+ H+ S Y +V++L+
Sbjct: 356 RSSTNVILPRRGNGEDTNLSNTKCTVEVSSISADKNHMP----DVSYAITHYRLLVEQLE 411
Query: 503 RVDMSALPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSS--SNFQYVVGGHPYSLAT 560
RVD+S +L F++N++N++ +HA + G P + +R + Y +GGH + +
Sbjct: 412 RVDLSMSETNIKLAFWINVYNSLVMHAYLAYGIPNSSLKRMALFHKAAYNIGGHAVTANS 471
Query: 561 IRNGIL--RSNR-----RQPYTIAKPFGSSDKRLELVQGK-----VNPLVHFGLCDATRS 608
I + +L RS R + A +D++ +LVQ K PL F LC S
Sbjct: 472 IEHALLCCRSPRIGRWFESILSTAMRKKCADEK-QLVQLKFGLPDCQPLALFALCTGASS 530
Query: 609 SPIVRFFSTQGVEPELRHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQ--DRETL 666
P+++ ++ + + EL A R+ FL V + +S+ V L +++ Y+ + G E L
Sbjct: 531 DPMLKVYTAKNISEELERAKRE-FLQASVVVR-KSKKVFLPRLVERYAREAGLAGADELL 588
Query: 667 KWILNYLD--PTKAGLLTHLLNDGGAINISYLNYDW 700
W + D T+ + ++ GG + +W
Sbjct: 589 AWARDNADARATQDAIQRLCVDAGGGRRKAAQAVEW 624
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,824,251
Number of extensions: 859763
Number of successful extensions: 2246
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2240
Number of HSP's successfully gapped: 8
Length of query: 704
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 596
Effective length of database: 11,396,689
Effective search space: 6792426644
Effective search space used: 6792426644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 160 (66.2 bits)