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Os06g0224200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glutaredoxin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.59 (0.0335) R2 : 0.711
β1 : 2.56 (0.124) R2dD : 0.289 R2D : 0.0927
β2 : 1.83 (0.0837) R2dC : 0.317 R2C : 0.184
β3 : -1.75 (0.13) R2dE : 0.125 R2E : -0.0305
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.21 (0.0714) R2dN8 : 0.245 R2N8 : 0.125
σ : 0.624
deviance : 179.59
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C
peak time of C : 21.3
E
wheather : humidity
threshold : 80.04
memory length : 1219
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.6 0.63 8.58 2.59 1.79 -1.77 -0.114 0.376 1.22 21.3 80.44 1247 -- --
179.59 0.624 8.59 2.56 1.82 -1.75 -0.037 -- 1.22 21.3 80.2 1222 -- --
179.49 0.624 8.58 2.59 1.81 -1.77 -- 0.337 1.22 21.3 79.92 1230 -- --
179.59 0.624 8.59 2.56 1.83 -1.75 -- -- 1.21 21.3 80.04 1219 -- --
338.91 0.857 8.52 2.57 -- -1.64 -- 0.763 1.23 -- 83.38 1457 -- --
247.57 0.738 8.57 2.26 1.66 -- -0.132 -- 1.28 20.7 -- -- -- --
247.63 0.737 8.57 2.27 1.66 -- -- -- 1.28 20.7 -- -- -- --
339.72 0.858 8.53 2.5 -- -1.58 -- -- 1.22 -- 83.51 1453 -- --
336.6 0.854 8.61 -- 1.78 -1.59 -- -- 1.09 21.4 94 1229 -- --
403.35 0.938 8.52 2.27 -- -- -- -- 1.26 -- -- -- -- --
383.29 0.916 8.62 -- 1.65 -- -- -- 1.02 20.8 -- -- -- --
493.53 1.03 8.57 -- -- -1.33 -- -- 1.06 -- 113.5 1464 -- --
538.73 1.08 8.58 -- -- -- -- -- 1.01 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 181.94 humidity 80 1440 < th dose dependent rect. 11 10
2 182.01 humidity 90 1440 < th dose dependent rect. 11 6
6 182.23 humidity 50 1440 > th dose dependent rect. 11 6
30 182.75 humidity 80 1440 < th dose dependent rect. 11 21
41 182.96 humidity 80 1440 < th dose dependent sin 20 NA
79 183.64 humidity 80 1440 < th dose dependent rect. 7 14
108 183.92 humidity 80 1440 < th dose dependent rect. 13 8
149 184.22 humidity 80 1440 < th dose dependent rect. 13 5
197 184.49 humidity 80 1440 < th dose dependent no NA NA
206 184.54 humidity 80 1440 < th dose dependent rect. 20 23
208 184.55 humidity 80 1440 < th dose dependent rect. 13 23
297 185.50 humidity 50 1440 > th dose dependent sin 21 NA
475 187.51 humidity 60 1440 > th dose independent rect. 14 3
476 187.51 humidity 50 720 > th dose dependent sin 17 NA
507 187.87 humidity 70 720 > th dose independent rect. 14 12
581 188.39 humidity 70 720 > th dose independent sin 14 NA
592 188.47 humidity 60 1440 < th dose independent rect. 14 1
601 188.58 humidity 70 720 > th dose independent rect. 14 6
630 188.72 humidity 50 720 > th dose dependent rect. 14 12
646 188.82 humidity 50 720 > th dose dependent rect. 15 10
708 189.12 humidity 60 1440 < th dose independent rect. 14 3
769 189.49 humidity 70 1440 > th dose independent rect. 11 21
782 189.61 humidity 70 1440 > th dose independent rect. 17 22
797 189.71 humidity 80 1440 < th dose independent rect. 7 9
839 189.87 humidity 70 1440 > th dose independent rect. 11 10
840 189.87 humidity 70 1440 > th dose independent rect. 11 18
842 189.88 humidity 70 1440 > th dose independent rect. 11 16
867 190.01 humidity 70 1440 < th dose independent sin 14 NA
888 190.07 humidity 60 1440 > th dose independent rect. 13 16
894 190.09 humidity 60 1440 > th dose independent rect. 13 18