Os03g0859900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF547 domain containing protein.
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Os03g0859900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF547 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 390.57 | 0.929 | 4.86 | -4.41 | 4.32 | -3.82 | -5.68 | 8.59 | -0.35 | 5.02 | 39.08 | 867 | 7.21 | -- |
| 426.33 | 0.962 | 4.91 | -4.24 | 3 | -1.95 | -1.86 | -- | -0.399 | 3.76 | 61.38 | 840 | 8.71 | -- |
| 407.83 | 0.941 | 4.89 | -4.46 | 2.13 | -1.71 | -- | 5.08 | -0.321 | 4.38 | 32.63 | 1252 | 6.89 | -- |
| 431.7 | 0.968 | 4.9 | -4.19 | 3.11 | -2.24 | -- | -- | -0.324 | 3.99 | 60.16 | 892 | 8.97 | -- |
| 446.9 | 0.985 | 4.92 | -4.48 | -- | -4.11 | -- | 5.81 | -0.487 | -- | -41.4 | 1346 | 2.64 | -- |
| 453.86 | 0.999 | 4.93 | -4.29 | 2.26 | -- | -2.26 | -- | -0.3 | 2.77 | -- | -- | -- | -- |
| 470.85 | 1.02 | 4.92 | -4.23 | 2.27 | -- | -- | -- | -0.288 | 2.96 | -- | -- | -- | -- |
| 461.76 | 1 | 4.96 | -4.2 | -- | -3.01 | -- | -- | -0.363 | -- | -430.7 | 1377 | 2.56 | -- |
| 873.61 | 1.38 | 4.84 | -- | 2.52 | -2.24 | -- | -- | -0.0478 | 4.29 | 81.05 | 843 | 8.11 | -- |
| 766.3 | 1.29 | 4.91 | -4.14 | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
| 943 | 1.44 | 4.81 | -- | 2.18 | -- | -- | -- | 0.184 | 2.94 | -- | -- | -- | -- |
| 930.25 | 1.42 | 4.83 | -- | -- | -3.19 | -- | -- | 0.127 | -- | -398.1 | 1395 | 3.02 | -- |
| 1217.5 | 1.63 | 4.81 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 394.37 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 8 |
| 3 | 395.46 | humidity | 80 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 4 | 395.60 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 6 | 395.92 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 12 | 396.54 | humidity | 50 | 720 | > th | dose dependent | sin | 12 | NA |
| 17 | 397.00 | humidity | 80 | 720 | < th | dose independent | rect. | 20 | 1 |
| 35 | 398.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 51 | 399.34 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 62 | 399.99 | humidity | 80 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 63 | 400.03 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 70 | 400.36 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 15 |
| 84 | 400.98 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 162 | 402.96 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 171 | 403.02 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 192 | 403.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 202 | 403.73 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 240 | 404.58 | humidity | 80 | 720 | > th | dose independent | sin | 11 | NA |
| 252 | 404.79 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 259 | 404.89 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 261 | 404.90 | humidity | 80 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 269 | 404.99 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 270 | 405.00 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 271 | 405.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 277 | 405.08 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 285 | 405.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 311 | 405.45 | humidity | 70 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 317 | 405.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 319 | 405.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 331 | 405.81 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 2 |
| 363 | 406.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 372 | 406.34 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 387 | 406.43 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 395 | 406.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 421 | 406.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 456 | 407.16 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 476 | 407.42 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 20 |
| 479 | 407.45 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 8 |
| 523 | 407.77 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 9 |
| 529 | 407.79 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 4 |
| 535 | 407.81 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 556 | 408.01 | humidity | 80 | 720 | > th | dose dependent | no | NA | NA |
| 571 | 408.13 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 6 |
| 575 | 408.15 | wind | 7 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 581 | 408.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 639 | 408.62 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 1 |
| 673 | 408.91 | humidity | 80 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 677 | 408.95 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 681 | 408.98 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 19 | 8 |
| 694 | 409.05 | humidity | 80 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 708 | 409.15 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 3 |
| 711 | 409.16 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 720 | 409.26 | wind | 1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 770 | 409.55 | humidity | 80 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 774 | 409.60 | wind | 3 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 776 | 409.62 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 6 |
| 777 | 409.63 | wind | 3 | 720 | < th | dose dependent | rect. | 23 | 13 |
| 780 | 409.65 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 781 | 409.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 787 | 409.68 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 15 | NA |
| 795 | 409.73 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 827 | 409.91 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 856 | 410.09 | wind | 1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 902 | 410.38 | wind | 5 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 904 | 410.38 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 22 |
| 918 | 410.47 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 938 | 410.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 967 | 410.66 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 20 | 8 |
| 998 | 410.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 17 | 17 |