Os02g0153000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF547 domain containing protein.
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Os02g0153000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF547 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.97 | 0.443 | 7.9 | -3.02 | 1.07 | 2.32 | 0.0101 | -1.29 | -0.652 | 23.5 | 19.65 | 1389 | -- | -- |
| 90.3 | 0.443 | 7.86 | -2.68 | 1.07 | 2.36 | -0.0608 | -- | -0.556 | 23.4 | 18.82 | 1388 | -- | -- |
| 88.96 | 0.439 | 7.9 | -3.03 | 1.06 | 2.32 | -- | -1.3 | -0.652 | 23.5 | 19.67 | 1378 | -- | -- |
| 90.29 | 0.443 | 7.86 | -2.69 | 1.07 | 2.37 | -- | -- | -0.56 | 23.5 | 18.63 | 1389 | -- | -- |
| 141.22 | 0.553 | 7.88 | -3.09 | -- | 2.62 | -- | -1.24 | -0.679 | -- | 20.62 | 2385 | -- | -- |
| 241.13 | 0.728 | 7.74 | -1.81 | 1.22 | -- | 0.119 | -- | -0.0226 | 23.9 | -- | -- | -- | -- |
| 241.19 | 0.727 | 7.74 | -1.82 | 1.22 | -- | -- | -- | -0.0231 | 23.9 | -- | -- | -- | -- |
| 141.81 | 0.555 | 7.86 | -2.97 | -- | 3.08 | -- | -- | -0.642 | -- | 13.54 | 2372 | -- | -- |
| 249.95 | 0.736 | 7.75 | -- | 0.998 | 1.49 | -- | -- | -0.0861 | 23.5 | 21.81 | 1263 | -- | -- |
| 335.24 | 0.856 | 7.71 | -1.78 | -- | -- | -- | -- | -0.00664 | -- | -- | -- | -- | -- |
| 328.23 | 0.847 | 7.69 | -- | 1.2 | -- | -- | -- | 0.179 | 23.8 | -- | -- | -- | -- |
| 290.97 | 0.794 | 7.74 | -- | -- | 1.98 | -- | -- | -0.126 | -- | 21.8 | 982 | -- | -- |
| 418.82 | 0.955 | 7.67 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 16 | 89.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 36 | 89.21 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 37 | 89.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 41 | 89.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 43 | 89.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 165 | 89.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 318 | 90.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 343 | 90.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 381 | 90.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 393 | 91.00 | temperature | 15 | 1440 | > th | dose dependent | sin | 2 | NA |
| 916 | 94.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 19 |
| 958 | 94.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |