Os09g0463300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF547 domain containing protein.
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Os09g0463300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF547 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.31 | 0.678 | 10.6 | -0.911 | 0.471 | 1.11 | -2.4 | 6.54 | -0.451 | 13.5 | 14.1 | 3463 | -- | -- |
| 227.17 | 0.702 | 10.8 | -2.05 | 0.442 | 1.09 | -2.64 | -- | -0.629 | 12.2 | 27.4 | 3428 | -- | -- |
| 228.99 | 0.705 | 10.5 | -0.84 | 0.456 | 1.29 | -- | 7.07 | -0.42 | 14.2 | 11.65 | 3748 | -- | -- |
| 246.37 | 0.731 | 10.7 | -2.34 | 0.55 | 0.989 | -- | -- | -0.54 | 14.3 | 28.96 | 2670 | -- | -- |
| 243.88 | 0.727 | 10.6 | -0.877 | -- | 1.04 | -- | 6.96 | -0.419 | -- | 12.35 | 3703 | -- | -- |
| 261.25 | 0.758 | 10.8 | -2 | 0.397 | -- | -2.59 | -- | -0.668 | 13.3 | -- | -- | -- | -- |
| 287.11 | 0.793 | 10.8 | -2.09 | 0.441 | -- | -- | -- | -0.679 | 14.8 | -- | -- | -- | -- |
| 259.74 | 0.751 | 10.8 | -2.42 | -- | 1.07 | -- | -- | -0.768 | -- | 25.8 | 1825 | -- | -- |
| 386.17 | 0.915 | 10.7 | -- | 0.538 | 0.682 | -- | -- | -0.314 | 14.7 | 30.58 | 3524 | -- | -- |
| 298.39 | 0.807 | 10.8 | -2.1 | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
| 401.75 | 0.938 | 10.7 | -- | 0.482 | -- | -- | -- | -0.447 | 14.9 | -- | -- | -- | -- |
| 400.91 | 0.933 | 10.7 | -- | -- | 0.5 | -- | -- | -0.505 | -- | 31.8 | 7055 | -- | -- |
| 415.2 | 0.951 | 10.7 | -- | -- | -- | -- | -- | -0.457 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.45 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 2 | 203.12 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 7 | 204.16 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 8 | 204.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 10 | 204.43 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 13 | 204.74 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 74 | 206.13 | temperature | 20 | 43200 | > th | dose independent | sin | 17 | NA |
| 164 | 206.87 | wind | 1 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 172 | 206.92 | temperature | 20 | 43200 | < th | dose independent | sin | 16 | NA |
| 202 | 207.05 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 277 | 207.46 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 326 | 207.67 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 330 | 207.68 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 334 | 207.69 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 340 | 207.70 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 386 | 207.78 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 432 | 207.86 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 437 | 207.86 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 10 |
| 444 | 207.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 462 | 207.94 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 528 | 208.07 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 585 | 208.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 631 | 208.22 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 658 | 208.27 | temperature | 20 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 783 | 208.65 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 873 | 209.03 | temperature | 25 | 43200 | < th | dose dependent | sin | 20 | NA |
| 930 | 209.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 982 | 209.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 15 |