BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0570400 Os09g0570400|AK065287
(591 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0570400 Major facilitator superfamily protein 1151 0.0
Os01g0279700 Major facilitator superfamily protein 673 0.0
Os05g0451100 Major facilitator superfamily protein 300 2e-81
Os12g0180100 Major facilitator superfamily protein 281 1e-75
Os11g0186800 Major facilitator superfamily protein 271 1e-72
Os01g0852200 Major facilitator superfamily protein 249 4e-66
AK108528 183 4e-46
Os09g0556400 Major facilitator superfamily MFS_1 protein 155 8e-38
>Os09g0570400 Major facilitator superfamily protein
Length = 591
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/591 (96%), Positives = 569/591 (96%)
Query: 1 MAMGAVLSSRTFASPLSSSGKQHPPQNNKCTCSSPPTRDKFSRLTTRTTIFQVSNYSRST 60
MAMGAVLSSRTFASPLSSSGKQHPPQNNKCTCSSPPTRDKFSRLTTRTTIFQVSNYSRST
Sbjct: 1 MAMGAVLSSRTFASPLSSSGKQHPPQNNKCTCSSPPTRDKFSRLTTRTTIFQVSNYSRST 60
Query: 61 SMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDPINTGWLKPRRWDNFT 120
SMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDPINTGWLKPRRWDNFT
Sbjct: 61 SMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDPINTGWLKPRRWDNFT 120
Query: 121 SLDTACVQPDYKIPVRTRADCKAEQYEITGSPLSPSDVPAEAVLIGDTNEISPWWQQFPK 180
SLDTACVQPDYKIPVRTRADCKAEQYEITGSPLSPSDVPAEAVLIGDTNEISPWWQQFPK
Sbjct: 121 SLDTACVQPDYKIPVRTRADCKAEQYEITGSPLSPSDVPAEAVLIGDTNEISPWWQQFPK 180
Query: 181 RWTVVXXXXXXXXXXNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGI 240
RWTVV NMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGI
Sbjct: 181 RWTVVLLCFFSFLLCNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGI 240
Query: 241 WADRXXXXXXXXXXXXWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSK 300
WADR WWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSK
Sbjct: 241 WADRFGGKVVLGFGVVWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSK 300
Query: 301 WVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQRKA 360
WVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQRKA
Sbjct: 301 WVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQRKA 360
Query: 361 HSSPSEDPELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGTFILL 420
HSSPSEDPELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGTFILL
Sbjct: 361 HSSPSEDPELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGTFILL 420
Query: 421 TWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSI 480
TWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSI
Sbjct: 421 TWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSI 480
Query: 481 GFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT 540
GFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT
Sbjct: 481 GFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNT 540
Query: 541 AGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591
AGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE
Sbjct: 541 AGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591
>Os01g0279700 Major facilitator superfamily protein
Length = 529
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/415 (79%), Positives = 355/415 (85%)
Query: 177 QFPKRWTVVXXXXXXXXXXNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQI 236
QFPKRW +V NMDRVNMSIAILPMS+EFGW+P TVGLIQSSFFWGYLLTQI
Sbjct: 115 QFPKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQI 174
Query: 237 LGGIWADRXXXXXXXXXXXXWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNN 296
GGIWAD WWSIAT LTP AAK+GLPFLLV RAFMG+GEGVAMPAMNN
Sbjct: 175 AGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNN 234
Query: 297 ILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALW 356
ILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLI FGWPSVFY+FGSLG WF+ W
Sbjct: 235 ILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTW 294
Query: 357 QRKAHSSPSEDPELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGT 416
KA+SSP EDP +S EK+ I +T EPV IPW LILSKPPVWALIVSHFCHNWGT
Sbjct: 295 ASKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGT 354
Query: 417 FILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKI 476
FILLTWMPTYYNQVLKFNLTESGL CVLPWLTMA+ AN GGWIADTLV RG+S+T VRKI
Sbjct: 355 FILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKI 414
Query: 477 MQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLG 536
MQSIGFLGPA FLT LS + +PAMAVLCMACSQG+DAFSQSGLYSNHQDIGPRYAGVLLG
Sbjct: 415 MQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLG 474
Query: 537 LSNTAGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591
LSNTAGVLAGVFGTAATGYILQ GSWD VF+V+VVLY+VGT+VWN+FSTGEK+++
Sbjct: 475 LSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529
>Os05g0451100 Major facilitator superfamily protein
Length = 535
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 239/417 (57%), Gaps = 3/417 (0%)
Query: 178 FPKRWTVVXXXXXXXXXXNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQIL 237
P+R VV N DRV MS+A++P ++++GWS + +G++QSSF WGY+ + ++
Sbjct: 119 LPERAKVVALVAAVMLLCNADRVVMSVAVVPFAAQYGWSSSFLGIVQSSFLWGYVFSSMV 178
Query: 238 GGIWADRXXXXXXXXXXXXWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNI 297
GG ADR WS+AT LTP AA LL +RA G+ EGVA P M+
Sbjct: 179 GGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTIMLLAIRALFGLAEGVAFPTMSTF 238
Query: 298 LSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQ 357
L KW P ER+ ++ + G +LG+V +P+++S G F F SLG +W ++W
Sbjct: 239 LPKWFPTHERATAVGISMGGFHLGNVISFLATPIIMSHIGLAGTFAFFASLGYLWLSVWL 298
Query: 358 RKAHSSPSEDPELSKAEKRYILGG-STLKEPVTSIP-WKLILSKPPVWALIVSHFCHNWG 415
S P + +SK+E + IL G S K + P + ILSK +WA+IV++ +NWG
Sbjct: 299 FNVESDPLDSRTISKSELQLILAGRSASKIQGSKFPSLREILSKIEMWAIIVANVVNNWG 358
Query: 416 TFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRK 475
F+LL+WMP Y+ V NL ++ +PW MA+ + G AD L+ G S+ VRK
Sbjct: 359 YFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFLIKSGFSVALVRK 418
Query: 476 IMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLL 535
IMQSIGF+GP + L L +TP++A + M + +FSQ+G + N QDI P+YAG L
Sbjct: 419 IMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLH 478
Query: 536 GLSNTAGVLAGVFGTAATGYILQ-KGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591
GL+N G +A + T TGY +Q GS+ + + VLY TV +N ++TG+ + +
Sbjct: 479 GLTNGIGTVAAIVSTIGTGYFVQWLGSFQAFLTLTAVLYFSATVFYNTYATGDLIFD 535
>Os12g0180100 Major facilitator superfamily protein
Length = 439
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 242/434 (55%), Gaps = 19/434 (4%)
Query: 176 QQFPKRWTVVXXXXXXXXXXNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQ 235
+FPKR+ +V ++RV SIA + G + A G+I S F++GY+L+Q
Sbjct: 7 MKFPKRYVIVLLTFICTNVCYIERVGFSIAYTVAADAIGVNQANKGMILSMFYYGYVLSQ 66
Query: 236 ILGGIWADRXXXXXXXXXXXXWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMN 295
I GG A R WS+ L PL K + L++ R F+G+ +G PA++
Sbjct: 67 IPGGWAAQRIGGRRVLLLSFVLWSLICGLIPLDPKREV-ILVLSRLFVGVAQGFIFPAIH 125
Query: 296 NILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFAL 355
+L++WVP ERSRS++L SGMYLG+ G+ F P L+ G SVF+ LG W +
Sbjct: 126 TVLAQWVPPQERSRSVSLTTSGMYLGAAGGMLFFPSLVKHMGAQSVFFVEAVLGVAWSVI 185
Query: 356 WQRKAHSSPSED------PELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSH 409
W + + P D P+++ EK G + IPW+ I+ PVWA++V++
Sbjct: 186 WLKFSSEPPRTDLPKVSMPKVASREKIKAQAGGVVAPRTVKIPWRRIIFSLPVWAIVVNN 245
Query: 410 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGV- 468
F ++ ++L+ W+PTY+ L+ +L + G +LP+ M IF+NIGG +AD L+ R +
Sbjct: 246 FTFHYALYVLMNWLPTYFELGLQLSLQDMGSSKMLPYFNMFIFSNIGGVVADHLITRRIL 305
Query: 469 SITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGP 528
SIT RK++ +IGF+ A+ L L RTP+ VLC + S G A ++G NH D+ P
Sbjct: 306 SITKTRKLLNTIGFVVSAVALMALPLFRTPSGTVLCSSISLGFLALGRAGFAVNHMDVAP 365
Query: 529 RYAGVLLGLSNTAGVLAGVFGTAATGYILQKG-----------SWDSVFQVAVVLYIVGT 577
++AG+++G+SNTAG LAG+ G TG IL+ +W +VF V L I +
Sbjct: 366 KFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFFVPGYLCIFSS 425
Query: 578 VVWNVFSTGEKVLE 591
+++ +FSTGEK+ E
Sbjct: 426 IIFLIFSTGEKIFE 439
>Os11g0186800 Major facilitator superfamily protein
Length = 428
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 238/429 (55%), Gaps = 14/429 (3%)
Query: 176 QQFPKRWTVVXXXXXXXXXXNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQ 235
+FPKR+ +V ++RV SIA + G + A G+I S F++GY+L+Q
Sbjct: 1 MKFPKRYAIVLLTFMCTNVCYIERVGFSIAYTVAADAVGTNQANKGMILSMFYYGYVLSQ 60
Query: 236 ILGGIWADRXXXXXXXXXXXXWWSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMN 295
I GG A R WS + PL + L++ R +G+ +G+ P+++
Sbjct: 61 IPGGWAAQRLGGRLVLLLSFVLWSSICAVVPLDPN-RVILLVLSRLLVGVAQGLIFPSIH 119
Query: 296 NILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFAL 355
+L++WVP ERSRS++L SGMYLG+ G+ P L+ G SVF LG W +
Sbjct: 120 TVLAQWVPPQERSRSVSLTTSGMYLGAACGMLLLPSLVKNMGPQSVFSVEAMLGVAWLLI 179
Query: 356 WQRKAHSSPSED-PELSKAEKRYILGGSTLKEPVTSIPWKLILSKPPVWALIVSHFCHNW 414
W + A P D P+++ +K + G + IPW IL P+WA++V++F ++
Sbjct: 180 WFKFASDPPRTDLPKVASKDKMKVQTGGIMAPRTVKIPWARILFSLPIWAIVVNNFTFHY 239
Query: 415 GTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGV-SITNV 473
++L+ W+PTY+ L+ +L + G +LP+L M +F+NIGG +AD L+ R + S+T
Sbjct: 240 ALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHLITRKILSVTKT 299
Query: 474 RKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGV 533
RK++ ++GF+ A+ L L RTP+ A+ C + S G A ++G NH D+ P++AG+
Sbjct: 300 RKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGI 359
Query: 534 LLGLSNTAGVLAGVFGTAATGYILQKG-----------SWDSVFQVAVVLYIVGTVVWNV 582
++G+SNTAG LAG+ G TG IL+ SW +VF V L I + ++ +
Sbjct: 360 VMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVPGYLCIFSSFIFLI 419
Query: 583 FSTGEKVLE 591
FSTGEK+ E
Sbjct: 420 FSTGEKIFE 428
>Os01g0852200 Major facilitator superfamily protein
Length = 353
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 199/340 (58%), Gaps = 8/340 (2%)
Query: 258 WSIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSG 317
WS+AT L+P AA L L R +G+ EGVA+P+MNN++ +W P +ERS ++ + +G
Sbjct: 8 WSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAG 67
Query: 318 MYLGSVTGLAFSPLLISRFGWPSVFYAFGSLGSVWFALWQRKAHSSPSEDPELSKAEKRY 377
LG+ GL SP+++SR G F FG G +W +W +P E+ ++S E Y
Sbjct: 68 FQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQISAHELDY 127
Query: 378 ILGGSTL------KEPVTSIP-WKLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 430
I G L E + +P + +LSK P WALI ++ H+WG F++L+WMP Y+ +
Sbjct: 128 ITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWMPVYFKTI 187
Query: 431 LKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLT 490
NL E+ LPW+ MA+ + G ++D L+ G SIT RKIMQ+IGF+GP + L
Sbjct: 188 YHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALL 247
Query: 491 LLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGT 550
L+ ++P +A + + G +F SG N Q+I P+YAGVL G+SNTAG A + GT
Sbjct: 248 GLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGT 307
Query: 551 AATGYILQK-GSWDSVFQVAVVLYIVGTVVWNVFSTGEKV 589
G+ + + GS+ + +LY T+ W++F+TGE+V
Sbjct: 308 VGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERV 347
>AK108528
Length = 381
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 259 SIATVLTPLAAKIGLPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGM 318
SI T+ P A+ L V R +G GV PA + W P +ERSR + +G
Sbjct: 17 SIFTIALPWFARFSPIALSVCRFIIGAAHGVIWPAFAGFWASWAPSNERSRLIGTGNAGA 76
Query: 319 YLGSVTGLAFSPLL-ISRF--GWPSVFYAFGSLGSVWFALWQRKAHSSPSEDPELSKAEK 375
+G+V L L I+ F GWPS+FY FG+LG VW +W A +SP E+ + +AEK
Sbjct: 77 QIGNVIALPLGGFLCINGFDGGWPSIFYVFGALGLVWTVIWFVFASNSPEENRFIGEAEK 136
Query: 376 RYILGG-----STLKEPVTSIPWKLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 430
YIL S+ +E + PW I+ P WA+ + H C NWGT++ LT +P Y +V
Sbjct: 137 EYILEETKNTRSSFEESESGAPWCAIMKSIPAWAIFIGHSCSNWGTYLFLTSLPLYMKEV 196
Query: 431 LKFNLTESGLLCVLPWLTMAIFANIGGWIADT-LVGRGVSITNVRKIMQSIGFLGPALFL 489
LKF++ +G L LP+L F + G I D L+ S T VRKI S+ F P L +
Sbjct: 197 LKFDIKSNGALSALPYLVFWAFILLAGNIGDYFLMKLKWSKTKVRKIFNSLAFFVPMLAV 256
Query: 490 TLLS----KVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLA 545
L+ +++ +A+L + + A+ +G N+ DI Y+GV+ G+ NT +
Sbjct: 257 LGLAFVTCEIKYVGVALLTVGLAFTGCAYG-AGFLVNYNDISGSYSGVVFGIGNTFATIP 315
Query: 546 GVFGTAATGYILQKG---SWDSVFQVAVVLYIVGTVVWNVFSTGE 587
G+ + G + + W VF + V+Y++G +V +FS+GE
Sbjct: 316 GIIAPSLVGLLTKNNLQEEWRIVFIITAVVYLIGAIVLLIFSSGE 360
>Os09g0556400 Major facilitator superfamily MFS_1 protein
Length = 219
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 6/202 (2%)
Query: 391 IPWKLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMA 450
+PW+ VWA+I +HFC +WG + L+W+PT++++ L NLTE+ + VLP L
Sbjct: 7 VPWREFFKSKAVWAMIYAHFCGSWGHYTCLSWLPTFFSEELDLNLTEAAWVSVLPPLGSM 66
Query: 451 IFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRT---PAMAVLCMAC 507
I +I AD L+ GV T VRKI Q+I FL PA F+ +LS V P V +
Sbjct: 67 IITSIAAPFADNLISNGVDTTKVRKICQTIAFLSPATFM-MLSSVDLGVPPWEIVAFLTS 125
Query: 508 SQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-KGSWD-SV 565
+F+ SGLY HQDI YA +LLG++NT G + G+ G A TGY+L SW S+
Sbjct: 126 GLALSSFALSGLYCTHQDISREYASILLGITNTVGAVPGIVGVALTGYLLDTTHSWSISL 185
Query: 566 FQVAVVLYIVGTVVWNVFSTGE 587
F ++ Y+ GT VW F++ E
Sbjct: 186 FAPSIFFYLTGTAVWLAFASSE 207
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,790,140
Number of extensions: 804203
Number of successful extensions: 1863
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1841
Number of HSP's successfully gapped: 8
Length of query: 591
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 485
Effective length of database: 11,501,117
Effective search space: 5578041745
Effective search space used: 5578041745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)