Os05g0451100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0451100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Major facilitator superfamily protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 232.33 | 0.716 | 7.9 | -0.443 | 1.45 | 0.201 | 0.432 | 5.86 | 0.189 | 2.35 | 991.1 | 10992 | -- | -- |
| 271.57 | 0.768 | 7.78 | 0.626 | 1.41 | 0.737 | 0.53 | -- | 0.388 | 2.38 | 993.1 | 11719 | -- | -- |
| 232.99 | 0.711 | 7.9 | -0.455 | 1.45 | 0.195 | -- | 5.86 | 0.189 | 2.39 | 991.8 | 10994 | -- | -- |
| 272.37 | 0.769 | 7.78 | 0.637 | 1.42 | 0.753 | -- | -- | 0.396 | 2.39 | 994.6 | 11760 | -- | -- |
| 356.93 | 0.88 | 7.88 | -0.303 | -- | 0.242 | -- | 5.53 | 0.237 | -- | 991.6 | 11803 | -- | -- |
| 282.4 | 0.788 | 7.78 | 0.485 | 1.42 | -- | 0.457 | -- | 0.387 | 2.34 | -- | -- | -- | -- |
| 283.13 | 0.788 | 7.78 | 0.472 | 1.42 | -- | -- | -- | 0.384 | 2.4 | -- | -- | -- | -- |
| 390.68 | 0.921 | 7.76 | 0.718 | -- | 0.814 | -- | -- | 0.446 | -- | 992.3 | 13097 | -- | -- |
| 282.49 | 0.783 | 7.79 | -- | 1.44 | 0.582 | -- | -- | 0.33 | 2.44 | 994.9 | 12435 | -- | -- |
| 403.08 | 0.938 | 7.77 | 0.533 | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
| 289.01 | 0.795 | 7.79 | -- | 1.43 | -- | -- | -- | 0.331 | 2.41 | -- | -- | -- | -- |
| 403.35 | 0.935 | 7.78 | -- | -- | 0.6 | -- | -- | 0.364 | -- | 994.5 | 13040 | -- | -- |
| 410.56 | 0.946 | 7.78 | -- | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.34 | radiation | 10 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 4 | 225.59 | radiation | 10 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 5 | 225.96 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 9 | 226.74 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 11 | 227.12 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 17 |
| 19 | 227.87 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 20 | 227.95 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 9 |
| 24 | 228.20 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 26 | 228.28 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 29 | 228.33 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 79 | 228.98 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 121 | 229.34 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 134 | 229.41 | humidity | 70 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 135 | 229.41 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 136 | 229.42 | humidity | 70 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 149 | 229.50 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 162 | 229.55 | humidity | 70 | 43200 | > th | dose independent | sin | 18 | NA |
| 200 | 229.80 | humidity | 70 | 43200 | > th | dose independent | sin | 1 | NA |
| 204 | 229.82 | humidity | 70 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 210 | 229.83 | radiation | 10 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 241 | 229.97 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 243 | 229.98 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 271 | 230.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 284 | 230.17 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 313 | 230.41 | humidity | 50 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 317 | 230.43 | humidity | 80 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 358 | 230.58 | humidity | 90 | 43200 | < th | dose dependent | rect. | 10 | 5 |
| 376 | 230.67 | radiation | 10 | 43200 | > th | dose independent | sin | 23 | NA |
| 389 | 230.72 | humidity | 90 | 43200 | < th | dose dependent | rect. | 24 | 17 |
| 430 | 230.91 | humidity | 90 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 449 | 230.99 | humidity | 50 | 43200 | > th | dose dependent | sin | 4 | NA |
| 492 | 231.11 | humidity | 70 | 43200 | < th | dose independent | sin | 17 | NA |
| 494 | 231.11 | temperature | 20 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 518 | 231.19 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 543 | 231.26 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 577 | 231.30 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 578 | 231.30 | humidity | 90 | 43200 | < th | dose dependent | sin | 2 | NA |
| 592 | 231.35 | temperature | 25 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 615 | 231.38 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 653 | 231.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 656 | 231.50 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 690 | 231.58 | humidity | 90 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 748 | 231.70 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 795 | 231.79 | temperature | 25 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 798 | 231.79 | humidity | 90 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 825 | 231.82 | humidity | 90 | 43200 | < th | dose dependent | no | NA | NA |
| 854 | 231.86 | humidity | 50 | 43200 | > th | dose dependent | rect. | 7 | 21 |
| 872 | 231.89 | temperature | 20 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 922 | 231.96 | humidity | 90 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 923 | 231.97 | radiation | 10 | 43200 | > th | dose independent | no | NA | NA |