Os09g0556400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily MFS_1 protein.
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Os09g0556400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily MFS_1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.59 | 0.381 | 12.1 | -0.0893 | 2.12 | -1.27 | 0.33 | 0.048 | -0.118 | 7.48 | 20.6 | 1724 | -- | -- |
| 65.59 | 0.377 | 12.1 | -0.0993 | 2.12 | -1.27 | 0.332 | -- | -0.121 | 7.48 | 20.6 | 1723 | -- | -- |
| 65.89 | 0.378 | 12.1 | -0.0894 | 2.12 | -1.27 | -- | 0.028 | -0.119 | 7.47 | 20.6 | 1723 | -- | -- |
| 65.89 | 0.378 | 12.1 | -0.0869 | 2.12 | -1.27 | -- | -- | -0.119 | 7.47 | 20.6 | 1723 | -- | -- |
| 278.89 | 0.778 | 12.1 | -0.0848 | -- | -1.18 | -- | 0.263 | 0.0102 | -- | 21.91 | 613 | -- | -- |
| 101.76 | 0.473 | 12.2 | -0.652 | 2.13 | -- | 0.498 | -- | -0.423 | 7.48 | -- | -- | -- | -- |
| 102.45 | 0.474 | 12.2 | -0.641 | 2.13 | -- | -- | -- | -0.424 | 7.47 | -- | -- | -- | -- |
| 193.33 | 0.648 | 12.2 | -0.074 | -- | -1.6 | -- | -- | 0.0374 | -- | 26.3 | 524 | -- | -- |
| 66.06 | 0.379 | 12.1 | -- | 2.12 | -1.31 | -- | -- | -0.103 | 7.47 | 20.6 | 1723 | -- | -- |
| 344.89 | 0.868 | 12.2 | -0.608 | -- | -- | -- | -- | -0.39 | -- | -- | -- | -- | -- |
| 113.28 | 0.498 | 12.2 | -- | 2.12 | -- | -- | -- | -0.352 | 7.49 | -- | -- | -- | -- |
| 186.61 | 0.636 | 12.1 | -- | -- | -1.73 | -- | -- | 0.137 | -- | 25.83 | 536 | -- | -- |
| 354.64 | 0.879 | 12.2 | -- | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 60.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 3 | 61.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 4 | 61.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 31 | 62.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 41 | 62.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 69 | 62.76 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 82 | 62.93 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 101 | 63.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 112 | 63.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 125 | 63.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 145 | 63.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 182 | 64.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 186 | 64.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 199 | 64.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 221 | 64.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 275 | 64.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 401 | 65.09 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 442 | 65.23 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |