Os11g0186800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
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Os11g0186800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.98 | 0.379 | 8.28 | -1.2 | 0.951 | 1.47 | -0.672 | -0.0973 | -0.0507 | 6.8 | 10.45 | 3809 | -- | -- |
| 64.99 | 0.375 | 8.27 | -1.17 | 0.95 | 1.47 | -0.676 | -- | -0.0437 | 6.8 | 10.41 | 3805 | -- | -- |
| 66.11 | 0.379 | 8.28 | -1.21 | 0.95 | 1.48 | -- | -0.0913 | -0.0534 | 6.87 | 10.85 | 3796 | -- | -- |
| 66.11 | 0.379 | 8.27 | -1.19 | 0.948 | 1.49 | -- | -- | -0.0446 | 6.88 | 10.76 | 3803 | -- | -- |
| 109.62 | 0.488 | 8.29 | -1.21 | -- | 1.5 | -- | 0.0212 | -0.0284 | -- | 8.772 | 4223 | -- | -- |
| 102.93 | 0.476 | 8.21 | -0.536 | 0.947 | -- | -0.793 | -- | 0.239 | 6.32 | -- | -- | -- | -- |
| 104.48 | 0.479 | 8.21 | -0.546 | 0.943 | -- | -- | -- | 0.242 | 6.39 | -- | -- | -- | -- |
| 108.03 | 0.484 | 8.29 | -1.13 | -- | 1.46 | -- | -- | -0.0422 | -- | 8.592 | 2820 | -- | -- |
| 92.13 | 0.447 | 8.23 | -- | 1.01 | 0.914 | -- | -- | 0.144 | 6.66 | 17.09 | 2000 | -- | -- |
| 150.7 | 0.574 | 8.23 | -0.521 | -- | -- | -- | -- | 0.262 | -- | -- | -- | -- | -- |
| 112.32 | 0.496 | 8.2 | -- | 0.936 | -- | -- | -- | 0.303 | 6.42 | -- | -- | -- | -- |
| 134.56 | 0.54 | 8.25 | -- | -- | 0.899 | -- | -- | 0.163 | -- | 16.9 | 2767 | -- | -- |
| 157.86 | 0.586 | 8.21 | -- | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 2 | 60.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 5 | 61.05 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 9 | 61.26 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 10 | 61.30 | radiation | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 16 | 61.37 | radiation | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 18 | 61.39 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 20 | 61.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 33 | 61.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 34 | 61.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 43 | 61.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 87 | 61.58 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 106 | 61.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 21 |
| 137 | 61.73 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 142 | 61.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 12 |
| 147 | 61.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 153 | 61.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 183 | 61.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 199 | 61.80 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 200 | 61.80 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 230 | 61.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 252 | 61.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 396 | 61.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 410 | 61.98 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 416 | 61.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 20 |
| 425 | 61.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 431 | 61.99 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 516 | 62.10 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 569 | 62.31 | radiation | 40 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 582 | 62.38 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 584 | 62.40 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 603 | 62.46 | radiation | 1 | 4320 | > th | dose dependent | rect. | 17 | 13 |
| 635 | 62.51 | radiation | 30 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 649 | 62.56 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 670 | 62.59 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 680 | 62.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 681 | 62.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 736 | 62.76 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 749 | 62.76 | radiation | 20 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 785 | 62.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 852 | 62.93 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 888 | 63.01 | radiation | 1 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 893 | 63.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 909 | 63.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 913 | 63.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 919 | 63.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 934 | 63.14 | radiation | 1 | 14400 | < th | dose dependent | rect. | 15 | 16 |
| 942 | 63.15 | radiation | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 945 | 63.16 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 953 | 63.17 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |