Os01g0279700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0279700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Major facilitator superfamily protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.41 | 0.368 | 12.7 | -0.724 | 2.84 | 1.27 | -0.0254 | 0.913 | -0.292 | 14.3 | 24.58 | 340 | -- | -- |
| 62.52 | 0.368 | 12.7 | -0.591 | 2.82 | 1.2 | -0.197 | -- | -0.255 | 14.3 | 24.91 | 364 | -- | -- |
| 61.41 | 0.365 | 12.7 | -0.726 | 2.84 | 1.27 | -- | 0.922 | -0.292 | 14.3 | 24.58 | 340 | -- | -- |
| 62.45 | 0.368 | 12.7 | -0.58 | 2.83 | 1.19 | -- | -- | -0.25 | 14.3 | 25 | 360 | -- | -- |
| 438.16 | 0.98 | 12.9 | -1.45 | -- | -2.48 | -- | 0.0021 | -0.885 | -- | 64 | 1057 | -- | -- |
| 82.17 | 0.425 | 12.8 | -0.88 | 2.73 | -- | -0.159 | -- | -0.487 | 14.2 | -- | -- | -- | -- |
| 82.26 | 0.425 | 12.8 | -0.885 | 2.73 | -- | -- | -- | -0.488 | 14.2 | -- | -- | -- | -- |
| 437.12 | 0.978 | 12.9 | -1.46 | -- | -2.18 | -- | -- | -0.915 | -- | 31.2 | 2522 | -- | -- |
| 70.73 | 0.392 | 12.7 | -- | 2.83 | 1.35 | -- | -- | -0.16 | 14.4 | 25.08 | 376 | -- | -- |
| 527.33 | 1.07 | 12.8 | -0.999 | -- | -- | -- | -- | -0.554 | -- | -- | -- | -- | -- |
| 102.91 | 0.475 | 12.7 | -- | 2.75 | -- | -- | -- | -0.39 | 14.2 | -- | -- | -- | -- |
| 448.44 | 0.986 | 12.6 | -- | -- | 2.17 | -- | -- | -0.101 | -- | 29.04 | 1038 | -- | -- |
| 553.68 | 1.1 | 12.8 | -- | -- | -- | -- | -- | -0.443 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 2 | 47.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 5 | 48.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 8 | 49.18 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 13 |
| 18 | 50.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 20 | 50.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 22 | 50.47 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 20 |
| 28 | 50.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 3 |
| 35 | 51.15 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 16 |
| 37 | 51.19 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 18 |
| 40 | 51.41 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 16 |
| 50 | 51.58 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 14 |
| 62 | 52.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 8 |
| 114 | 52.85 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 130 | 52.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 14 |
| 136 | 53.06 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 145 | 53.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 188 | 53.59 | temperature | 10 | 10 | > th | dose dependent | sin | 12 | NA |
| 227 | 53.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 238 | 54.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 20 |
| 303 | 54.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 380 | 55.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 11 |
| 469 | 55.71 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 4 |
| 518 | 55.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 556 | 56.19 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 7 |
| 586 | 56.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 642 | 56.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 651 | 56.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 12 |
| 672 | 56.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 696 | 56.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 733 | 57.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 18 |
| 837 | 57.55 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 2 |
| 881 | 57.71 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 15 | 14 |
| 883 | 57.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 945 | 57.88 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 989 | 58.02 | temperature | 20 | 30 | > th | dose independent | sin | 13 | NA |