BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0279700 Os01g0279700|AK100107
(529 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29650.1 | chr2:12673685-12676003 REVERSE LENGTH=513 729 0.0
AT4G00370.1 | chr4:163153-166111 REVERSE LENGTH=542 716 0.0
AT2G38060.1 | chr2:15922727-15925623 REVERSE LENGTH=513 345 4e-95
AT5G20380.1 | chr5:6887936-6892358 REVERSE LENGTH=518 325 3e-89
AT3G46980.3 | chr3:17307294-17309899 REVERSE LENGTH=535 318 3e-87
AT5G44370.1 | chr5:17875147-17876445 REVERSE LENGTH=433 247 1e-65
>AT2G29650.1 | chr2:12673685-12676003 REVERSE LENGTH=513
Length = 512
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/414 (85%), Positives = 371/414 (89%)
Query: 116 FPKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIA 175
FPKRW IV LCFSAFLLCNMDRVNMSIAILPMSAE+GWNP TVGLIQSSFFWGYLLTQIA
Sbjct: 99 FPKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIA 158
Query: 176 GGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNI 235
GGIWADTVGGK VLGFGVIWWSIAT LTP AAKLGLP+LLV RAFMGVGEGVAMPAMNNI
Sbjct: 159 GGIWADTVGGKRVLGFGVIWWSIATILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNI 218
Query: 236 LSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWA 295
LSKWVPV ERSRSLALVYSGMYLGSVTGLAFSP LIH FGWPSVFYSFGSLG W + W
Sbjct: 219 LSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWL 278
Query: 296 SKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTF 355
+KA SSPLEDP + EE+KLI EPVK IPW LILSKPPVWALI HFCHNWGTF
Sbjct: 279 TKAESSPLEDPTLLPEERKLIADNCASKEPVKSIPWRLILSKPPVWALISCHFCHNWGTF 338
Query: 356 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIM 415
ILLTWMPTYY+QVLKFNL ESGL V PW+TMA+SAN GGWIADTLVSRG SVT VRKIM
Sbjct: 339 ILLTWMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIM 398
Query: 416 QSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGL 475
Q+IGFLGPAFFLTQL HIDSP MAVLCMACSQGTDAFSQSGLYSNHQDI PRY+GVLLGL
Sbjct: 399 QTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGL 458
Query: 476 SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529
SNTAGVLAGV GTAATG+ILQHGSWDDVF +SV LYLVGT++WNLFSTGEKIID
Sbjct: 459 SNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNLFSTGEKIID 512
>AT4G00370.1 | chr4:163153-166111 REVERSE LENGTH=542
Length = 541
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/414 (83%), Positives = 372/414 (89%)
Query: 116 FPKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIA 175
FP+RW IV LCFS+FLLCNMDRVNMSIAILPMS E+ W+ TVGLIQSSFFWGYLLTQI
Sbjct: 128 FPRRWVIVLLCFSSFLLCNMDRVNMSIAILPMSQEYNWSSATVGLIQSSFFWGYLLTQIL 187
Query: 176 GGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNI 235
GGIWAD GGK VLGFGV+WWS AT +TP AA+LGLPFLLV RAFMG+GEGVAMPAMNN+
Sbjct: 188 GGIWADKFGGKVVLGFGVVWWSFATIMTPIAARLGLPFLLVVRAFMGIGEGVAMPAMNNM 247
Query: 236 LSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWA 295
LSKW+PVSERSRSLALVYSGMYLGSVTGLAFSP+LI FGWPSVFYSFGSLG WF W
Sbjct: 248 LSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVFYSFGSLGSIWFLLWL 307
Query: 296 SKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTF 355
AYSSP +DP +S EEKK+I + EPV IPW LILSKPPVWALI+SHFCHNWGTF
Sbjct: 308 KFAYSSPKDDPDLSEEEKKVILGGSKPREPVTVIPWKLILSKPPVWALIISHFCHNWGTF 367
Query: 356 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIM 415
ILLTWMPTYYNQVLKFNLTESGL CVLPWLTMAV AN GGWIADTLVSRGLS+T VRKIM
Sbjct: 368 ILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIM 427
Query: 416 QSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGL 475
QSIGFLGPAFFL+QLSH+ +PAMAVLCMACSQG+DAFSQSGLYSNHQDIGPRYAGVLLGL
Sbjct: 428 QSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGL 487
Query: 476 SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529
SNTAGVLAGVFGTAATGYILQ GSWDDVFKV+V LYL+GTLVWNLF+TGEKI+D
Sbjct: 488 SNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNLFATGEKILD 541
>AT2G38060.1 | chr2:15922727-15925623 REVERSE LENGTH=513
Length = 512
Score = 345 bits (884), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 255/416 (61%), Gaps = 5/416 (1%)
Query: 117 PKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAG 176
P+R +V L LCN DRV MS+A++P++ + GW+ +G++QSSF WGY+ + + G
Sbjct: 96 PERIKVVILTACMMCLCNADRVVMSVAVVPLADKLGWSSSFLGVVQSSFLWGYIFSSVIG 155
Query: 177 GIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNIL 236
G D GGK VL +GV WS+AT LTP+AA LL RAF G+ EGVAMP+M +L
Sbjct: 156 GALVDRYGGKRVLAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLL 215
Query: 237 SKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWAS 296
S+W P+ ER+ ++ + +G ++G+V GL +PL++ + G F F SLG+ W STW+S
Sbjct: 216 SRWFPMDERASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGLLWVSTWSS 275
Query: 297 KAYSSPLEDPGISAEEKKLITS----QTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNW 352
++P + P I+ E +LI + Q + P L+LSK P WA+I ++ +NW
Sbjct: 276 GVTNNPQDSPFITRSELRLIQAGKPVQPSTISPKPNPSLRLLLSKLPTWAIIFANVTNNW 335
Query: 353 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVR 412
G F+LL+WMP Y+ V NL ++ F LPW TMA+S + G +D L+ G SVT+VR
Sbjct: 336 GYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVR 395
Query: 413 KIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVL 472
KIMQSIGF+GP L L+ SP+ A + M + +FSQ+G N QDI P+YAG L
Sbjct: 396 KIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFL 455
Query: 473 LGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVVLYLVGTLVWNLFSTGEKI 527
G+SN AG LA + T TGY +Q GS+ V+ LY T+ W LF+TGE++
Sbjct: 456 HGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511
>AT5G20380.1 | chr5:6887936-6892358 REVERSE LENGTH=518
Length = 517
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 249/415 (60%), Gaps = 8/415 (1%)
Query: 117 PKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAG 176
P+R+ ++ AF++CNMD+VN+SIAI+PMS +FGW+ GL+QSSFFWGY L+Q+ G
Sbjct: 96 PQRYKLIGATSLAFVICNMDKVNLSIAIIPMSHQFGWSSSVAGLVQSSFFWGYALSQLPG 155
Query: 177 GIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNIL 236
G + GG+ VL GV WS ATAL P A +P L+ +R +G+GEGV+ A +++
Sbjct: 156 GWLSKIFGGRKVLEIGVFTWSFATALVPLLAGF-MPGLIFSRILVGIGEGVSPSAATDLI 214
Query: 237 SKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWA- 295
++ +PV ERSR++ V+ G+ LGSV GL +P +I F W SVFY FG LGV WF +
Sbjct: 215 ARTIPVKERSRAVGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLGVGWFVGFQF 274
Query: 296 SKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTF 355
+ IS K ++ G +KEIPW P VWA+I +HFC +WG +
Sbjct: 275 LNEEEVSYKGNEISTSHKSENATKEELGSSLKEIPWKSFFQSPAVWAMIYTHFCGSWGHY 334
Query: 356 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIM 415
L+W+PTY+++ L NLTE+ +LP L V + AD L++ G+ TTVRKI
Sbjct: 335 TCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVDTTTVRKIC 394
Query: 416 QSIGFLGPAFFLTQLSHID---SPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVL 472
Q+I F+ PA +T LS +D P V + +F+ SGLY HQDI P YA +L
Sbjct: 395 QTIAFVAPAICMT-LSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL 453
Query: 473 LGLSNTAGVLAGVFGTAATGYILQH-GSWD-DVFKVSVVLYLVGTLVWNLFSTGE 525
LG++NT G + G+ G A TG++L SW +F S+ YL GT+VW F++ E
Sbjct: 454 LGITNTVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSE 508
>AT3G46980.3 | chr3:17307294-17309899 REVERSE LENGTH=535
Length = 534
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 253/422 (59%), Gaps = 16/422 (3%)
Query: 118 KRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGG 177
+R +V + A LCN DRV MS+AI+P+S GW+ G++QSSF WGYL++ IAGG
Sbjct: 110 ERVKVVAMLALALALCNADRVVMSVAIVPLSLSRGWSKSFSGIVQSSFLWGYLISPIAGG 169
Query: 178 IWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNILS 237
D GGK V+ +GV WS+AT LTP+AA L LL RA +GV EGVA+P MNN+++
Sbjct: 170 TLVDRYGGKVVMAWGVALWSLATFLTPWAADSSLWALLAARAMVGVAEGVALPCMNNMVA 229
Query: 238 KWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWASK 297
+W P +ERSR++ + +G LG+V GL SP+L+ G F FG G W W S
Sbjct: 230 RWFPPTERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFVIFGLSGFLWLLVWLSA 289
Query: 298 AYSSPLEDPGISAEE------KKLITSQ-----TTGGEPVKEIPWGLILSKPPVWALIVS 346
S+P P I+ E KK I++ +T G P P+G +LSK P WA+IV+
Sbjct: 290 TSSAPDRHPQITKSELEYIKQKKQISTMENKRISTSGIP----PFGRLLSKMPTWAVIVA 345
Query: 347 HFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGL 406
+ H+WG F++L+WMP Y+N V NL ++ F +PW MA + G+ +D L+ RG
Sbjct: 346 NSMHSWGFFVILSWMPIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRGT 405
Query: 407 SVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGP 466
S+T RKIMQSIGF+GP L L+ P +A ++ + G +FS G N Q+I P
Sbjct: 406 SITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAP 465
Query: 467 RYAGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVVLYLVGTLVWNLFSTGE 525
Y+GVL G+ TAG LA + GT G+ ++ GS+ ++ +LYL+ L +N+++TGE
Sbjct: 466 EYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGE 525
Query: 526 KI 527
++
Sbjct: 526 RV 527
>AT5G44370.1 | chr5:17875147-17876445 REVERSE LENGTH=433
Length = 432
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 17/428 (3%)
Query: 117 PKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAG 176
P+R+ IVFL F + +C ++RV SIA + G N + G I S+FF GY +Q+ G
Sbjct: 7 PQRYVIVFLTFLSTCVCYIERVGFSIAYTVAADAAGINQSSKGTILSTFFVGYACSQVPG 66
Query: 177 GIWADTVGGKTVLGFGVIWWSIATALTPFAA-KLGLPFLLVTRAFMGVGEGVAMPAMNNI 235
G A +GG+ VL + WS L P ++GL L+V R +GV +G P+++ +
Sbjct: 67 GWAAQKIGGRKVLLLSFVLWSSTCFLVPLDPNRVGL--LVVARLLVGVAQGFIFPSIHTV 124
Query: 236 LSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWA 295
L++WVP ERSR +++ SGMYLG+ G+ P L+ G SVF + GV W W
Sbjct: 125 LAQWVPPHERSRLVSITTSGMYLGAALGMWLLPALVELRGPESVFLAEALAGVIWSLLWI 184
Query: 296 SKAYSSPL-EDPGISAEEKKLITSQTT-GGEPVKEIPWGLILSKPPVWALIVSHFCHNWG 353
A P E P +A T V IPW I+ PVWA++V++F ++
Sbjct: 185 RYATDPPRSEHPKAAAAGFGGALLPTNVNHHKVTHIPWKKIMLSLPVWAIVVNNFTFHYA 244
Query: 354 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVS-RGLSVTTVR 412
++L+ W+PTY+ L+ +L ++P+L M V + GG+IAD L++ R LSVT R
Sbjct: 245 LYVLMNWLPTYFELGLQISLQGMDSSKMVPYLNMFVFSIVGGFIADYLITKRILSVTRTR 304
Query: 413 KIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVL 472
K + ++GFL + L L + +LC + + G A ++G NH DI PRYAG++
Sbjct: 305 KFLNTVGFLIASAALMVLPMFRTENGVILCSSVALGFLALGRAGFAVNHMDIAPRYAGIV 364
Query: 473 LGLSNTAGVLAGVFGTAATGYILQHG-----------SWDDVFKVSVVLYLVGTLVWNLF 521
+G+SNTAG LAG+ G TG +L+ SW VF + +L + ++V+ LF
Sbjct: 365 MGVSNTAGTLAGIIGVDLTGKLLEASKLVYSDLSHPESWRVVFFIPGLLCIFSSVVFLLF 424
Query: 522 STGEKIID 529
STGE+I D
Sbjct: 425 STGERIFD 432
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,877,872
Number of extensions: 400877
Number of successful extensions: 1223
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1213
Number of HSP's successfully gapped: 7
Length of query: 529
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 426
Effective length of database: 8,282,721
Effective search space: 3528439146
Effective search space used: 3528439146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)