BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0483500 Os09g0483500|AK121473
(137 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0483500 Calcium-binding EF-hand domain containing protein 271 1e-73
Os09g0483100 EF-Hand type domain containing protein 245 6e-66
Os09g0482840 Calcium-binding EF-hand domain containing protein 243 4e-65
Os09g0483300 Calcium-binding EF-hand domain containing protein 235 9e-63
Os09g0482800 Calcium-binding EF-hand domain containing protein 216 4e-57
AK121706 216 4e-57
Os08g0502600 Calcium-binding EF-hand domain containing protein 193 4e-50
Os10g0116300 EF-Hand type domain containing protein 133 4e-32
Os03g0411300 EF-Hand type domain containing protein 115 1e-26
Os11g0495700 78 2e-15
>Os09g0483500 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG
Sbjct: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
Query: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE
Sbjct: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
Query: 121 EGSFLKVAVDRELAKAA 137
EGSFLKVAVDRELAKAA
Sbjct: 121 EGSFLKVAVDRELAKAA 137
>Os09g0483100 EF-Hand type domain containing protein
Length = 138
Score = 245 bits (626), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/138 (90%), Positives = 132/138 (95%), Gaps = 1/138 (0%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDGKT+RSFVEDEGAFNSSVDGRFAALD NRDGLLSY+EMA ELMSLRVLEKHFG
Sbjct: 1 MSVEILDGKTVRSFVEDEGAFNSSVDGRFAALDANRDGLLSYTEMAGELMSLRVLEKHFG 60
Query: 61 VD-EAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVV 119
VD EAAM +DELVE+YRGL+ARFD DGNG VDLEEFRAEMKE++LAVANGLGFLPVQMVV
Sbjct: 61 VDDEAAMGADELVELYRGLFARFDRDGNGAVDLEEFRAEMKEMLLAVANGLGFLPVQMVV 120
Query: 120 EEGSFLKVAVDRELAKAA 137
EEGSFLKVAVDRELAKAA
Sbjct: 121 EEGSFLKVAVDRELAKAA 138
>Os09g0482840 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 243 bits (619), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/137 (89%), Positives = 130/137 (94%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDGKT+ SFVEDEGAFNSSVDGRFAALDTNRDGLLSY+EMA ELMSLRVL+KHFG
Sbjct: 1 MSVEILDGKTVLSFVEDEGAFNSSVDGRFAALDTNRDGLLSYAEMANELMSLRVLDKHFG 60
Query: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
VDEAAM +DELVE+Y GL+ RFD DG+G VDLEEFRAEMKEV+LAVANGLGFLPVQMVVE
Sbjct: 61 VDEAAMGADELVELYHGLFLRFDRDGSGAVDLEEFRAEMKEVLLAVANGLGFLPVQMVVE 120
Query: 121 EGSFLKVAVDRELAKAA 137
EGSFLKVAVDRELAKAA
Sbjct: 121 EGSFLKVAVDRELAKAA 137
>Os09g0483300 Calcium-binding EF-hand domain containing protein
Length = 140
Score = 235 bits (599), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/139 (86%), Positives = 128/139 (92%), Gaps = 2/139 (1%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDGKT+RSFVEDEGAFNSSVDGRFAALD NRDG+LSY+EMA ELMSLRVLEKHFG
Sbjct: 1 MSVEILDGKTVRSFVEDEGAFNSSVDGRFAALDANRDGVLSYAEMAGELMSLRVLEKHFG 60
Query: 61 VDE--AAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMV 118
DE AAM +DEL +YRGL+ARFD DG+G VDLEEFRAEMKEV+LAVANGLGFLPVQMV
Sbjct: 61 ADEDEAAMGADELAALYRGLFARFDRDGSGGVDLEEFRAEMKEVLLAVANGLGFLPVQMV 120
Query: 119 VEEGSFLKVAVDRELAKAA 137
VEEGSFLKVAVDRELA AA
Sbjct: 121 VEEGSFLKVAVDRELAGAA 139
>Os09g0482800 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 216 bits (550), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 123/137 (89%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDG+T+ SFVEDEGAFNS+VD RFAALD +RDG LSY++MA ELMSLRVLE HFG
Sbjct: 1 MSVEILDGRTVESFVEDEGAFNSTVDDRFAALDGDRDGRLSYADMAGELMSLRVLETHFG 60
Query: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
VD AA + ELV++YRGL+ARFD DG+G VD EEFRAEMKEVMLAVA+GLGFLPVQMVVE
Sbjct: 61 VDGAAATDAELVDLYRGLFARFDRDGDGAVDREEFRAEMKEVMLAVASGLGFLPVQMVVE 120
Query: 121 EGSFLKVAVDRELAKAA 137
EGSFLK AV+RELAKAA
Sbjct: 121 EGSFLKRAVERELAKAA 137
>AK121706
Length = 137
Score = 216 bits (550), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 123/137 (89%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEILDG+T+ SFVEDEGAFNS+VD RFAALD +RDG LSY++MA ELMSLRVLE HFG
Sbjct: 1 MSVEILDGRTVESFVEDEGAFNSTVDDRFAALDGDRDGRLSYADMAGELMSLRVLETHFG 60
Query: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
VD AA + ELV++YRGL+ARFD DG+G VD EEFRAEMKEVMLAVA+GLGFLPVQMVVE
Sbjct: 61 VDGAAATDAELVDLYRGLFARFDRDGDGAVDREEFRAEMKEVMLAVASGLGFLPVQMVVE 120
Query: 121 EGSFLKVAVDRELAKAA 137
EGSFLK AV+RELAKAA
Sbjct: 121 EGSFLKRAVERELAKAA 137
>Os08g0502600 Calcium-binding EF-hand domain containing protein
Length = 135
Score = 193 bits (490), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG 60
MSVEI+DG T+RSFV+DE AFN+SVDGRFAALD +RDG+LSY++M+ ELM+LRVL+ HFG
Sbjct: 1 MSVEIVDGSTVRSFVDDEAAFNASVDGRFAALDADRDGVLSYADMSGELMALRVLDTHFG 60
Query: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE 120
+YRGL+ARFD DG+G V L EFRAEMKEVML VANGLGFLPVQMVVE
Sbjct: 61 --VDDGHGGADDGLYRGLFARFDRDGDGKVGLHEFRAEMKEVMLVVANGLGFLPVQMVVE 118
Query: 121 EGSFLKVAVDRELAKAA 137
+GSFLKVAVDRELAKAA
Sbjct: 119 DGSFLKVAVDRELAKAA 135
>Os10g0116300 EF-Hand type domain containing protein
Length = 101
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 78/87 (89%)
Query: 36 RDGLLSYSEMAKELMSLRVLEKHFGVDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEF 95
RD LLSY EMA ELMSLR+L+KHFG DEA MS+DELV++YRGL+A FD DG+G V+LEEF
Sbjct: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
Query: 96 RAEMKEVMLAVANGLGFLPVQMVVEEG 122
RAEMKEV+LAVA+GLGFL VQMVVE+G
Sbjct: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG 90
>Os03g0411300 EF-Hand type domain containing protein
Length = 158
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLE-KHF 59
MSV ILDG T+R FV D+ AF SVD RF ALD N DG+LS +E+ + L S R+L+ F
Sbjct: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALDANGDGVLSRAELRRALESFRLLDGAGF 60
Query: 60 GVDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVV 119
G E A E+ +Y ++ +FD D +G VD EFR +M+ +MLAVA+GLG P+Q+ V
Sbjct: 61 GSAEPAPLPAEVSALYDSVFEQFDADHSGAVDRAEFRDQMRRIMLAVADGLGSQPLQVAV 120
Query: 120 EE--GSFLKVAVDRELAKAA 137
++ GSFL A + E A A
Sbjct: 121 DDEGGSFLLEAAEHEAASIA 140
>Os11g0495700
Length = 327
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 1 MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVL-EKHF 59
MSV ILDG T+R FV D+ AF SVD RF AL+TN DG+LS +++ + L S +L F
Sbjct: 1 MSVVILDGSTVRGFVADDDAFARSVDARFEALNTNGDGVLSCAKLRRALESFLLLYGAGF 60
Query: 60 GVDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVA 107
G + A E+ +Y ++ +FD D + VD EFR M+ ++ + A
Sbjct: 61 GSAQLAPVPAEVSALYDSIFEQFDADHSSAVDRAEFRDRMRCILGSCA 108
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,053,120
Number of extensions: 151852
Number of successful extensions: 653
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 648
Number of HSP's successfully gapped: 10
Length of query: 137
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 47
Effective length of database: 12,336,541
Effective search space: 579817427
Effective search space used: 579817427
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 150 (62.4 bits)