BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0483400 Os09g0483400|AK103890
         (140 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0483400  Ubiquitin                                           251   9e-68
Os09g0483200  Ribosomal protein L40e family protein               211   2e-55
Os09g0452700  Ubiquitin                                           202   5e-53
Os07g0489500  Similar to Ubiquitin                                195   9e-51
Os03g0234200  Ubiquitin                                           188   1e-48
Os03g0259500  Ribosomal protein L40e family protein               178   1e-45
AK064604                                                          177   2e-45
Os06g0681400  Polyubiquitin                                       134   1e-32
Os02g0161900  Polyubiquitin                                       134   1e-32
Os05g0504766  Similar to Polyubiquitin protein (Fragment)         134   1e-32
Os06g0650100  Similar to Polyubiquitin gene (Fragment)            134   2e-32
Os04g0628100  Similar to Polyubiquitin                            134   2e-32
Os09g0420800  Similar to Ubiquitin                                134   2e-32
AK067024                                                          134   2e-32
Os01g0328400  Ubiquitin                                           134   3e-32
AK059242                                                          134   3e-32
Os05g0160200  Ubiquitin                                           134   3e-32
Os06g0673500  Similar to Ubiquitin                                133   4e-32
Os08g0187000                                                      132   8e-32
AK108207                                                          132   1e-31
Os01g0641200  Ubiquitin domain containing protein                 131   2e-31
Os01g0641400                                                      113   4e-26
AF216530                                                          112   6e-26
Os05g0457400  Similar to Ubiquitin                                106   7e-24
Os05g0242133  Ubiquitin domain containing protein                 103   3e-23
Os10g0491801                                                       93   6e-20
Os07g0492200                                                       89   1e-18
Os08g0185900  Ubiquitin domain containing protein                  88   2e-18
Os10g0491500                                                       81   3e-16
D21312                                                             74   4e-14

>Os09g0483400 Ubiquitin
          Length = 140

 Score =  251 bits (642), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 126/140 (90%), Positives = 126/140 (90%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST              YTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK
Sbjct: 61  IQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120

Query: 121 CGHSKELRLKKKFINSLSIA 140
           CGHSKELRLKKKFINSLSIA
Sbjct: 121 CGHSKELRLKKKFINSLSIA 140



>Os09g0483200 Ribosomal protein L40e family protein
          Length = 139

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 113/135 (83%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGK+ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST              YTIQEP+L  LALKY EKK VCRKCYARLP RS +CRKKK
Sbjct: 61  IQKESTLHLVLRLRGGSRGGYTIQEPSLLLLALKYNEKKMVCRKCYARLPARSTNCRKKK 120

Query: 121 CGHSKELRLKKKFIN 135
           CGH+ ++R KK+FI+
Sbjct: 121 CGHTNQIRPKKRFIS 135



>Os09g0452700 Ubiquitin
          Length = 140

 Score =  202 bits (515), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 103/139 (74%), Positives = 111/139 (79%), Gaps = 1/139 (0%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQ-EPTLRALALKYREKKKVCRKCYARLPIRSHHCRKK 119
           IQKEST              Y    EP LR LA KY E K VCR+CYARLP+RS +CRKK
Sbjct: 61  IQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARLPLRSTNCRKK 120

Query: 120 KCGHSKELRLKKKFINSLS 138
           KCGHS E+R KK+F++ LS
Sbjct: 121 KCGHSNEIRAKKRFMSKLS 139



>Os07g0489500 Similar to Ubiquitin
          Length = 135

 Score =  195 bits (495), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 107/135 (79%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST              Y + EP L ALA    EKK +CRKCYARLP ++ +CRKKK
Sbjct: 61  IQKESTLHLVLRLRGGGRPGYPMIEPNLLALARSKMEKKMICRKCYARLPYKATNCRKKK 120

Query: 121 CGHSKELRLKKKFIN 135
           CGH+ ELR KKK ++
Sbjct: 121 CGHTNELRPKKKLVS 135



>Os03g0234200 Ubiquitin
          Length = 129

 Score =  188 bits (478), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 107/135 (79%), Gaps = 6/135 (4%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST                I EP+L+ALA KY + K +CRKCYARL  R+ +CRKKK
Sbjct: 61  IQKESTLHLVLRLRG------GIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKK 114

Query: 121 CGHSKELRLKKKFIN 135
           CGHS +LR KKK  N
Sbjct: 115 CGHSNQLRPKKKIKN 129



>Os03g0259500 Ribosomal protein L40e family protein
          Length = 136

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 101/131 (77%), Gaps = 4/131 (3%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVE+SD + NVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST              +   EP+LR LA K+   K VCRKCYA LP R+ +CRKKK
Sbjct: 61  IQKEST----LHLVLRLRGGHIWIEPSLRVLAYKHNINKMVCRKCYATLPPRATNCRKKK 116

Query: 121 CGHSKELRLKK 131
           CGHS +LR KK
Sbjct: 117 CGHSNQLRPKK 127



>AK064604 
          Length = 128

 Score =  177 bits (449), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 102/133 (76%), Gaps = 6/133 (4%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  IQKESTXXXXXXXXXXXXXXYTIQEPTLRALALKYREKKKVCRKCYARLPIRSHHCRKKK 120
           IQKEST                I EP+LR LA KY   K +CRKCYARL  R+ +CRKKK
Sbjct: 61  IQKESTLHLVLRLRG------GIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKK 114

Query: 121 CGHSKELRLKKKF 133
           CGH+  LR KKK 
Sbjct: 115 CGHTNNLRPKKKV 127



>Os06g0681400 Polyubiquitin
          Length = 457

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKEST 66
           IQKEST
Sbjct: 137 IQKEST 142




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKEST 66
           IQKEST
Sbjct: 213 IQKEST 218




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQKEST 66
           IQKEST
Sbjct: 289 IQKEST 294




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKEST 66
           IQKEST
Sbjct: 365 IQKEST 370




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440

Query: 61  IQKEST 66
           IQKEST
Sbjct: 441 IQKEST 446



>Os02g0161900 Polyubiquitin
          Length = 457

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKEST 66
           IQKEST
Sbjct: 137 IQKEST 142




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKEST 66
           IQKEST
Sbjct: 213 IQKEST 218




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQKEST 66
           IQKEST
Sbjct: 289 IQKEST 294




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKEST 66
           IQKEST
Sbjct: 365 IQKEST 370




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440

Query: 61  IQKEST 66
           IQKEST
Sbjct: 441 IQKEST 446



>Os05g0504766 Similar to Polyubiquitin protein (Fragment)
          Length = 381

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKEST 66
           IQKEST
Sbjct: 137 IQKEST 142




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKEST 66
           IQKEST
Sbjct: 213 IQKEST 218




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQKEST 66
           IQKEST
Sbjct: 289 IQKEST 294




 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKEST 66
           IQKEST
Sbjct: 365 IQKEST 370



>Os06g0650100 Similar to Polyubiquitin gene (Fragment)
          Length = 177

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 25 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 84

Query: 61 IQKEST 66
          IQKEST
Sbjct: 85 IQKEST 90




 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQ 62
           I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct: 103 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 162

Query: 63  KEST 66
             S 
Sbjct: 163 GGSV 166



>Os04g0628100 Similar to Polyubiquitin
          Length = 392

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 88  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 147

Query: 61  IQKEST 66
           IQKEST
Sbjct: 148 IQKEST 153




 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 164 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 223

Query: 61  IQKEST 66
           IQKEST
Sbjct: 224 IQKEST 229




 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 240 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 299

Query: 61  IQKEST 66
           IQKEST
Sbjct: 300 IQKEST 305




 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 316 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 375

Query: 61  IQKEST 66
           IQKEST
Sbjct: 376 IQKEST 381




 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/66 (96%), Positives = 65/66 (98%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVE SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 12 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 71

Query: 61 IQKEST 66
          IQKEST
Sbjct: 72 IQKEST 77



>Os09g0420800 Similar to Ubiquitin
          Length = 153

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQ 62
           I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138

Query: 63  KEST 66
             S 
Sbjct: 139 GGSV 142



>AK067024 
          Length = 305

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKEST 66
           IQKEST
Sbjct: 137 IQKEST 142




 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKEST 66
           IQKEST
Sbjct: 213 IQKEST 218




 Score =  132 bits (332), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 64/65 (98%), Positives = 65/65 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQKES 65
           IQKES
Sbjct: 289 IQKES 293



>Os01g0328400 Ubiquitin
          Length = 155

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66



>AK059242 
          Length = 155

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66



>Os05g0160200 Ubiquitin
          Length = 155

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66



>Os06g0673500 Similar to Ubiquitin
          Length = 187

 Score =  133 bits (334), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 65/66 (98%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/66 (93%), Positives = 63/66 (95%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGKTITL VESSD IDNVKAKIQDKEGIPPDQQRLIFA KQL+DGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRTLADYN 136

Query: 61  IQKEST 66
           IQKEST
Sbjct: 137 IQKEST 142



>Os08g0187000 
          Length = 203

 Score =  132 bits (332), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/66 (95%), Positives = 66/66 (100%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQIFVKTLTGK+ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL++GRTLADYN
Sbjct: 114 MQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 173

Query: 61  IQKEST 66
           IQKEST
Sbjct: 174 IQKEST 179



>AK108207 
          Length = 159

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/66 (96%), Positives = 66/66 (100%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66



>Os01g0641200 Ubiquitin domain containing protein
          Length = 154

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/66 (95%), Positives = 65/66 (98%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66




 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 49/66 (74%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T  DY 
Sbjct: 77  LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYK 136

Query: 61  IQKEST 66
           I+  S 
Sbjct: 137 IEAGSV 142



>Os01g0641400 
          Length = 152

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 61/66 (92%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFVKTL G+TITL V+S D+++NVKA+I D+EG+PP QQRLIFAGKQL+DGRTLADYN
Sbjct: 1  MQIFVKTLNGRTITLVVDSCDSVENVKARIHDREGVPPHQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKEST 66
          IQKEST
Sbjct: 61 IQKEST 66



>AF216530 
          Length = 72

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/57 (94%), Positives = 55/57 (96%)

Query: 10 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST 66
          GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF GKQL+DGR LADYNIQKEST
Sbjct: 5  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFGGKQLEDGRNLADYNIQKEST 61



>Os05g0457400 Similar to Ubiquitin
          Length = 99

 Score =  106 bits (264), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 54/56 (96%)

Query: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST 66
          + ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DG TLADYNIQKEST
Sbjct: 27 RVITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQKEST 82



>Os05g0242133 Ubiquitin domain containing protein
          Length = 77

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/50 (98%), Positives = 50/50 (100%)

Query: 17 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST 66
          VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYNIQKEST
Sbjct: 1  VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 50



>Os10g0491801 
          Length = 147

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 51/65 (78%)

Query: 2  QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNI 61
          QIFVK LTGKT  L +E SDT+++VK K+ DKEG+PPDQQ LIF G QLDDG TL  Y I
Sbjct: 7  QIFVKGLTGKTTALRMEPSDTVESVKVKLVDKEGLPPDQQPLIFQGHQLDDGHTLIYYGI 66

Query: 62 QKEST 66
          Q+EST
Sbjct: 67 QEEST 71



>Os07g0492200 
          Length = 86

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 51/66 (77%), Gaps = 1/66 (1%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFV+TL  + ITLEVE SDTI +VK KI DK GIP D QRL+ AG+QLDD RTLADY 
Sbjct: 1  MQIFVRTLD-ECITLEVEGSDTIGDVKVKIHDKNGIPADDQRLMHAGRQLDDRRTLADYG 59

Query: 61 IQKEST 66
          IQ E T
Sbjct: 60 IQTEHT 65



>Os08g0185900 Ubiquitin domain containing protein
          Length = 212

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 50/65 (76%)

Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
          MQIFV+T+T   + +EV   DT+  VKAKIQ K GIP  QQRL+FAG+ L+DGRTLA+Y 
Sbjct: 1  MQIFVRTVTAGPLAVEVNPWDTVGKVKAKIQAKGGIPAAQQRLMFAGRHLEDGRTLAEYG 60

Query: 61 IQKES 65
          I+KE+
Sbjct: 61 IKKEA 65



>Os10g0491500 
          Length = 307

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 49/65 (75%)

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
           MQI V  L G T TL VE SDT+++VK ++Q+K+G+PP QQRLIF G+QLDDG T+A   
Sbjct: 70  MQILVSGLRGNTWTLWVEPSDTVESVKLQLQEKDGLPPCQQRLIFEGRQLDDGDTVASCG 129

Query: 61  IQKES 65
           I+K S
Sbjct: 130 IRKHS 134



>D21312 
          Length = 87

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/35 (94%), Positives = 34/35 (97%)

Query: 32 DKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST 66
          DKEGIPPDQQRLIFAGKQL+DGRTLADYNIQK ST
Sbjct: 1  DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKXST 35



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,777,215
Number of extensions: 116132
Number of successful extensions: 416
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 414
Number of HSP's successfully gapped: 56
Length of query: 140
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 49
Effective length of database: 12,284,327
Effective search space: 601932023
Effective search space used: 601932023
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 150 (62.4 bits)