Os06g0673500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0673500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ubiquitin.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.16 | 0.358 | 8.92 | 1.49 | 0.352 | -0.163 | -0.7 | -4.26 | 0.417 | 7.02 | 26.41 | 4295 | -- | -- |
| 62.04 | 0.367 | 8.83 | 2.36 | 0.336 | -0.614 | -0.455 | -- | 0.464 | 7.27 | 28.48 | 4327 | -- | -- |
| 59.4 | 0.359 | 8.92 | 1.48 | 0.348 | -0.153 | -- | -4.29 | 0.423 | 7.17 | 26.69 | 4305 | -- | -- |
| 62.79 | 0.369 | 8.81 | 2.41 | 0.336 | -0.617 | -- | -- | 0.55 | 7.21 | 27.94 | 4325 | -- | -- |
| 65.82 | 0.378 | 8.92 | 1.53 | -- | -0.177 | -- | -4.11 | 0.434 | -- | 26.7 | 4335 | -- | -- |
| 74.63 | 0.405 | 8.8 | 2.25 | 0.337 | -- | -0.707 | -- | 0.594 | 7.3 | -- | -- | -- | -- |
| 75.89 | 0.408 | 8.8 | 2.24 | 0.335 | -- | -- | -- | 0.597 | 7.73 | -- | -- | -- | -- |
| 68.59 | 0.386 | 8.82 | 2.42 | -- | -0.652 | -- | -- | 0.57 | -- | 27.41 | 3833 | -- | -- |
| 206.33 | 0.669 | 8.87 | -- | 0.357 | -0.182 | -- | -- | 0.309 | 7.26 | 29.98 | 4313 | -- | -- |
| 81.95 | 0.423 | 8.81 | 2.24 | -- | -- | -- | -- | 0.601 | -- | -- | -- | -- | -- |
| 207.55 | 0.674 | 8.86 | -- | 0.355 | -- | -- | -- | 0.348 | 7.29 | -- | -- | -- | -- |
| 213.04 | 0.68 | 8.87 | -- | -- | -0.178 | -- | -- | 0.317 | -- | 30.11 | 4324 | -- | -- |
| 214.22 | 0.683 | 8.87 | -- | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.83 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 2 | 55.95 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 5 | 56.61 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 6 | 56.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 8 | 56.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 12 | 57.03 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 13 | 57.06 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 14 | 57.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 16 | 57.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 17 | 57.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 6 |
| 22 | 57.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 23 | 57.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 24 | 57.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 25 | 57.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 38 | 57.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 43 | 57.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 47 | 57.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 64 | 57.67 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 65 | 57.67 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 70 | 57.68 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 72 | 57.69 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 73 | 57.69 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 85 | 57.75 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 120 | 57.93 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 125 | 57.95 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 146 | 58.03 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 170 | 58.11 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 208 | 58.23 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 209 | 58.23 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 258 | 58.31 | temperature | 30.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 261 | 58.31 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 276 | 58.38 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 293 | 58.44 | temperature | 30.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 300 | 58.46 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 333 | 58.48 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 349 | 58.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 364 | 58.54 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 430 | 58.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 450 | 58.63 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 465 | 58.66 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 560 | 58.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 19 |
| 561 | 58.73 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 654 | 58.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 655 | 58.80 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 669 | 58.81 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 720 | 58.85 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 778 | 58.89 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 846 | 58.90 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 21 |
| 875 | 58.91 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 972 | 58.95 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 980 | 58.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 996 | 58.96 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 23 |