Os09g0452700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin.
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Os09g0452700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.38 | 0.85 | 3.61 | -0.52 | 0.267 | 8.09 | -0.839 | -19.5 | 1.04 | 1.34 | 48 | 583 | -- | -- |
| 361.3 | 0.892 | 3.52 | -0.342 | 0.32 | -0.36 | -1.33 | -- | 0.993 | 0.872 | 48 | 583 | -- | -- |
| 329.73 | 0.846 | 3.66 | -0.611 | 0.266 | 12.2 | -- | -29.5 | 1.02 | 1.9 | 47.01 | 575 | -- | -- |
| 366.98 | 0.892 | 3.53 | -0.389 | 0.302 | 0.507 | -- | -- | 1.03 | 0.924 | 49.24 | 571 | -- | -- |
| 334 | 0.851 | 3.65 | -0.586 | -- | 12.2 | -- | -29.6 | 1.05 | -- | 47.04 | 570 | -- | -- |
| 361.67 | 0.892 | 3.52 | -0.356 | 0.329 | -- | -1.28 | -- | 0.994 | 0.886 | -- | -- | -- | -- |
| 368.55 | 0.899 | 3.52 | -0.309 | 0.334 | -- | -- | -- | 1 | 1.21 | -- | -- | -- | -- |
| 373.34 | 0.9 | 3.51 | -0.349 | -- | 0.69 | -- | -- | 1.02 | -- | 48.95 | 571 | -- | -- |
| 369.76 | 0.896 | 3.51 | -- | 0.328 | 0.53 | -- | -- | 1.04 | 1.53 | 49 | 571 | -- | -- |
| 375.45 | 0.905 | 3.51 | -0.296 | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
| 371.07 | 0.901 | 3.51 | -- | 0.329 | -- | -- | -- | 1.03 | 1.17 | -- | -- | -- | -- |
| 376.48 | 0.904 | 3.51 | -- | -- | 0.531 | -- | -- | 1.05 | -- | 48.91 | 571 | -- | -- |
| 377.77 | 0.907 | 3.51 | -- | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.14 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 2 | 323.78 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 3 | 323.81 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 4 | 323.89 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 5 | 323.90 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 8 | 324.03 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 10 | 324.08 | humidity | 50 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 11 | 324.10 | humidity | 50 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 14 | 324.19 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 15 | 324.19 | humidity | 50 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 46 | 324.27 | humidity | 60 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 59 | 324.28 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 153 | 324.92 | humidity | 80 | 30 | < th | dose independent | rect. | 23 | 1 |
| 157 | 324.92 | humidity | 80 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 530 | 326.70 | humidity | 50 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 608 | 328.95 | humidity | 50 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 685 | 329.66 | humidity | 50 | 720 | < th | dose independent | rect. | 12 | 1 |
| 813 | 330.22 | humidity | 50 | 720 | < th | dose dependent | sin | 7 | NA |
| 875 | 331.14 | humidity | 50 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 905 | 331.56 | humidity | 50 | 720 | < th | dose independent | sin | 7 | NA |
| 946 | 333.03 | radiation | 30 | 720 | > th | dose independent | rect. | 12 | 4 |
| 980 | 333.59 | radiation | 40 | 720 | < th | dose independent | rect. | 12 | 8 |