BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0372900 Os09g0372900|AK059785
(379 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0372900 Cyclin-like F-box domain containing protein 795 0.0
Os09g0517800 Cyclin-like F-box domain containing protein 139 2e-33
Os09g0479100 Cyclin-like F-box domain containing protein 121 8e-28
Os02g0199500 Cyclin-like F-box domain containing protein 97 2e-20
Os01g0637100 Cyclin-like F-box domain containing protein 80 2e-15
Os09g0447600 80 2e-15
Os10g0391200 Cyclin-like F-box domain containing protein 76 5e-14
Os08g0493200 74 1e-13
Os09g0448100 Cyclin-like F-box domain containing protein 74 2e-13
Os08g0492900 71 1e-12
Os08g0493450 67 2e-11
Os02g0563800 Cyclin-like F-box domain containing protein 65 8e-11
>Os09g0372900 Cyclin-like F-box domain containing protein
Length = 379
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MIGQGGSTMGGKKAKTVERNDHRLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPH 60
MIGQGGSTMGGKKAKTVERNDHRLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPH
Sbjct: 1 MIGQGGSTMGGKKAKTVERNDHRLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPH 60
Query: 61 FVHEHLKRSQQKLLLFANDKANDRSLAMVLADDTGATYQLTRPMASRSLFVHNSCNGLLC 120
FVHEHLKRSQQKLLLFANDKANDRSLAMVLADDTGATYQLTRPMASRSLFVHNSCNGLLC
Sbjct: 61 FVHEHLKRSQQKLLLFANDKANDRSLAMVLADDTGATYQLTRPMASRSLFVHNSCNGLLC 120
Query: 121 LGDSTGAVQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAH 180
LGDSTGAVQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAH
Sbjct: 121 LGDSTGAVQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAH 180
Query: 181 FDSFNVCCEIFTIGDKSWRQIGSFHGAPTDRGVHVNGAVYYLTKFRYIASSRINCLNLES 240
FDSFNVCCEIFTIGDKSWRQIGSFHGAPTDRGVHVNGAVYYLTKFRYIASSRINCLNLES
Sbjct: 181 FDSFNVCCEIFTIGDKSWRQIGSFHGAPTDRGVHVNGAVYYLTKFRYIASSRINCLNLES 240
Query: 241 ENFDVMMLPPRKSYGGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRY 300
ENFDVMMLPPRKSYGGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRY
Sbjct: 241 ENFDVMMLPPRKSYGGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRY 300
Query: 301 HISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTH 360
HISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTH
Sbjct: 301 HISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTH 360
Query: 361 TFIESIVPLRKDYFIKQIQ 379
TFIESIVPLRKDYFIKQIQ
Sbjct: 361 TFIESIVPLRKDYFIKQIQ 379
>Os09g0517800 Cyclin-like F-box domain containing protein
Length = 408
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 184/404 (45%), Gaps = 57/404 (14%)
Query: 9 MGGKKAKTVERNDHRLLCS----DVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHE 64
M +KAK+ +R + S D++ +VF LP +TL +C VCK W S + DP FV
Sbjct: 1 MVSEKAKSNKRKKLECIISRLPRDLIEQVFLSLPVKTLLNCIGVCKQWRSIIQDPKFVTS 60
Query: 65 HLKRSQQ-KLLLFANDKANDRSL---AMVLADDTGATYQLTRPMASRSLFVHNSCNGLLC 120
HL+ + LL F + + L +L D+ + P+ F+ S NGL+C
Sbjct: 61 HLQLAPHCALLFFPRELVSSCGLYPSEAILIDEAWSQSIWDVPVIGPDDFLCGSSNGLVC 120
Query: 121 LGDSTGAVQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAH 180
L T +++ N TGE L P FS ++ GF P TKE+KV HF +H
Sbjct: 121 LYTHTTTIKIANLATGECLHLAKPAKNLTDDHFS---FYSFGFHPLTKEYKVTHFLASSH 177
Query: 181 -------FDSFNVCCEIFTIGDKSWRQIG-----SFHGAPTDRGVHVNGAVYYLTKFRYI 228
DSF+ +++T+GD+ W+ IG S + V+V+G +Y+LT+ +
Sbjct: 178 ETRIRAKVDSFD-GVQVYTLGDEKWKYIGAPEALSLNCVKNSGVVNVDGTMYWLTEDQGT 236
Query: 229 A-SSRINCLNLESENFDVMMLP-----------PRKSYGGHCSLAELEGKLCLLVVEGGH 276
+ + +L E+F + LP PR+ + + E++GK+C+ +
Sbjct: 237 SWHHAVMSFDLNKESFGRIQLPTAALEDSAFYGPRRYW-----IKEIDGKVCIATCQTSD 291
Query: 277 DNP---PRTMDILMLDSGDKTTWTHRYHISLPWLMPSCYFTPKHTLFHEGKIWVQLLARN 333
+ P + I LD + W +Y I PS P + H KI +Q ARN
Sbjct: 292 NQPILLRGEIQIWALDINLEQKWIQKYIIQ-----PSAQHIPGPNIVHRDKIVLQHDARN 346
Query: 334 LYCYDPSSSSTELKMACPESEFPFS--------THTFIESIVPL 369
L Y+ + E+K++ E FS +TF++S+V L
Sbjct: 347 LCSYELLGKNVEVKLSNMEKLLDFSPRKPGSMQVYTFVKSLVRL 390
>Os09g0479100 Cyclin-like F-box domain containing protein
Length = 503
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 44/395 (11%)
Query: 9 MGGKKAKTVERNDH---RLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEH 65
M KKA ++ + LL D++ + RLP TL CR VCK W + DP F H
Sbjct: 1 MASKKALAMQPSKKICMTLLPQDIVELILLRLPVSTLLRCRGVCKQWDGIIRDPQFAMVH 60
Query: 66 LKRSQQKLLLFANDKANDRSL---AMVLADDTGATYQLTRPMASRSLFVHNSCNGLLCLG 122
++R+ ++ L F + L +L D+ + + P+ F+ SCNGL+CL
Sbjct: 61 IQRAPRRPLFFFQRENLVHLLYPSEAILFDEAWSPSKWVVPVIEPDDFLCASCNGLICLH 120
Query: 123 DSTGAVQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAHF- 181
+++ N TGE L P+ + + FS ++ GF P TK++KV+HF H
Sbjct: 121 SDKSTIKIANLATGECMHLVKPVRNSKTDHFS---YYSFGFHPVTKQYKVMHFLRDEHLH 177
Query: 182 --DSFNVCCEIFTIGDKSWRQIG-----SFHGAPTDRGVHVNGAVYYLTK-FRYIASSRI 233
SF++ +++T+GD+ WR + S V+V GA+Y+LT+ + +
Sbjct: 178 VGTSFSI-IQVYTLGDEKWRDVRTPQALSLRCVERSGVVNVGGAMYWLTEDEESVWKHAV 236
Query: 234 NCLNLESENFDVMMLP---PRKSYGG---HCSLAELEGKLCLLVVEGGHDNPPRTMDILM 287
+L E F + LP P G + E++ + + E G + I
Sbjct: 237 VTFDLSEELFQWLQLPAVDPANYVLGDPDQWLITEVDSNVSVSYYETG------KLHIWT 290
Query: 288 LDSGDKTTWTHRYHISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELK 347
+DS + +W+ +Y+I L S P KI + +NLY Y+ ++E++
Sbjct: 291 IDSKIEQSWSQKYNIRL-----SMLEVPGPHWICGDKIILHDFNKNLYFYELMGKNSEIE 345
Query: 348 MACPESEFPFSTHT------FIESIVPLRKDYFIK 376
+ + FS F++S+V R D F K
Sbjct: 346 SSKLVKQLRFSPRNNMQCFMFVKSLV--RLDAFRK 378
>Os02g0199500 Cyclin-like F-box domain containing protein
Length = 436
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 34/355 (9%)
Query: 25 LCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLK---RSQQKLLLFANDKA 81
L D+ + LP RT+ VCK W + +P FV HL R +Q + F +
Sbjct: 22 LPQDIQRIIIGFLPGRTVLKFCSVCKFWRDCIVEPAFVDHHLNCALRFRQAIACFTS--V 79
Query: 82 NDRSLAMVLADDTGATYQLTRPMASRSLFVHNSCNGLLCLGDSTGAVQLLNPTTGESATL 141
++ + M + D ++ T P+ S + CNG++C D GA ++LNPTT + TL
Sbjct: 80 DNGLVQMYMFDPITVNFKRTEPVFSSRFHMSQPCNGMVCAYDLKGAAEVLNPTTRKHLTL 139
Query: 142 PM--PMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAHFDSFNVCCEIFTIGDKSWR 199
P +Y A S++ LG+ STKE+KVV +F VC TIG SWR
Sbjct: 140 PASESVYQAQYSEY------FLGYVHSTKEYKVVALRHWIKHLTFEVC----TIGTLSWR 189
Query: 200 QI-GSFHGA--PTDRGVHVNGAVYYLTKFRYIA--SSRINCLNLESENFDVMMLPPRKSY 254
+ GS T + V VN +++L + + +I NL E F + +P
Sbjct: 190 TVRGSEEEELLKTTKPVVVNDEMHWLLLDDESSHFTRKILSFNLTDEKFSYLDVPD-SVR 248
Query: 255 GGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRYHISLPWLMPSC-YF 313
L E EGKL L + T + L + W H ++I+ P ++ + +F
Sbjct: 249 DRDLELVEGEGKLHLWSMPC--KGAAYTESEIWLADSTRQFWVHLHNIAHPSVLGTKPFF 306
Query: 314 TPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTHTFIESIVP 368
K LF L ++ + Y T + P E S+ F+ES VP
Sbjct: 307 MYKSKLF--------LGSQKRFIYIDILDGTVCYVDIPSGENIISSGMFVESFVP 353
>Os01g0637100 Cyclin-like F-box domain containing protein
Length = 487
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 64/349 (18%)
Query: 32 EVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQK--------LLLFANDKAND 83
E+F RLPA+TLA + VCK+W + +++P F+ HL+ S K ++L A D +
Sbjct: 2 EIFIRLPAKTLARFKSVCKAWHTIISEPFFIRSHLRHSAFKHKQEPSFFVILHALDNVVE 61
Query: 84 RSLA----------------MVLADDTGATYQLTRPMASRSLFVHNSCNGLLCLGDSTGA 127
+ + +V A D YQ+ M+ C+GL+ T
Sbjct: 62 ITFSNNVPVFRWKDGQGNACLVHAMDFHGEYQIINKMS--------HCDGLVLFPTDT-K 112
Query: 128 VQLLNPTTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFY---LGAHFDSF 184
+ ++N TT + LP + Q + LG P T +KV ++ + ++
Sbjct: 113 LYVINLTTSDVLRLPDNQESDTLRQATG-----LGLDPRTNMYKVARYFYRSVDHTIGTY 167
Query: 185 NVCCEIFTIG-DKSWRQIGSFHGAPT---DRGVHVNGAVYYLTKFRYIA--SSRINCLNL 238
+ E+F+IG D WR+ P + +H G +++ R++ S C +L
Sbjct: 168 DAAMEVFSIGQDAFWRETSEVPPYPVRSMESPIHSKGYLFWNIDERFLKGQSRGFLCFSL 227
Query: 239 ESENFDVMMLP-PRKSYGGHCSL-AELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTW 296
E E F ++ P P SL +EL+G+LC+ + G L + +G++ W
Sbjct: 228 EDETFSLIPHPCPYLPLNHGTSLVSELDGELCVGLFISGQQQ-------LWMYNGNQ--W 278
Query: 297 THRYHISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTE 345
R+ I++P P+ + P L H+ LL R + Y + S+E
Sbjct: 279 DQRFSINVP--GPNDLYIPLDILPHDQ----LLLQRGPHLYHHNHQSSE 321
>Os09g0447600
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 23 RLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQK--LLLFAND- 79
R + DVL ++ LP+++L R VCK+W + ++ FV+ HL+ S+Q+ LL+
Sbjct: 34 RYIPEDVLFKILSWLPSKSLIRFRSVCKAWHATISSSRFVNAHLECSKQRPSLLVIPGSF 93
Query: 80 --KANDRSLAMVLA----DDTGATYQLTRPMASRSLFVHNSCNGLLCLGDSTGAVQLLNP 133
K N ++A +++ D + P R C+GLL + + + NP
Sbjct: 94 EMKKNGENIAFLMSLYKYQDPNIMHLQDFPRGIRKWIRPVHCDGLLLISTRKHKMMICNP 153
Query: 134 TTGESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVH-FYLGAHFDSFNVC-CEIF 191
+T E +LP GS GF P + ++KV FY + + VC E+
Sbjct: 154 STREIVSLP-----EGSHSLCGGMGLGFGFDPHSNKYKVARAFYQRDYPTTRQVCKFEVL 208
Query: 192 TIGDKSWRQIGSFHGAPTDR--GVHVNGAVYYLTK 224
T+G +WRQ P DR VHV GA+Y+ K
Sbjct: 209 TLGTDAWRQTED-PPYPIDRLTPVHVKGAIYWKKK 242
>Os10g0391200 Cyclin-like F-box domain containing protein
Length = 492
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 138/337 (40%), Gaps = 59/337 (17%)
Query: 29 VLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQKLLLFANDKANDRSLAM 88
VL E+ RLPAR++ CR VC +W +DP F+ H R + L++ +DR A+
Sbjct: 150 VLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIYFRRGGSDRVGAI 209
Query: 89 VL-ADDTGATYQLTRPMASRSLFVHNSCNGLLCLGDSTGAVQLLNPTTGESATLPMPMYT 147
L A T P ++ SC+GLL L S+G + NP T A +P
Sbjct: 210 DLHAAQLRPVVDHTWPPLGYTVIA--SCDGLLLL--SSGRFYICNPATNHWAEIP----- 260
Query: 148 AGSSQFSSCNWHCLGFCP--STKEHKVVHFYLGAHFDSFNVCC-EIFTIGDKSWRQIGSF 204
Q ++ LG P + E++V++ F C I T+G R I
Sbjct: 261 ----QLVDADF--LGLYPHNPSGEYRVLY----GEFHGEEECVYHILTLGSDEPRCITMT 310
Query: 205 HGAPT---------------DRGVHVNGAVYYLTKFRYIASSRINCLNLESENFDVMMLP 249
G+ T DR V V G +++ + R +I + SE+F M P
Sbjct: 311 MGSETVEQPLAREFLMHARGDRSVLVRGNLHWYLRHRD-GGCKIMVFDTASESFQWMRHP 369
Query: 250 PRKSYGGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRYHISLPWLMP 309
+ G SL E++ L VE +D+ +L +++TW ++ I LP M
Sbjct: 370 ---AIPGWVSLLEMDSTLVFSAVECTT-----RIDLWVLQDYERSTWACKHRIELP--MA 419
Query: 310 SCYFTPKHTLFH----------EGKIWVQLLARNLYC 336
P+ L H EG + V+ R L+C
Sbjct: 420 QIRQFPECNLEHLGWSAMVVSVEGDVLVRCSNRILHC 456
>Os08g0493200
Length = 384
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 36/265 (13%)
Query: 27 SDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQKLLLFANDKANDRSL 86
SD + E+ RLP + CRLVC+ W + D RS+ K L+ + ++
Sbjct: 11 SDAVVEILVRLPPSSRRRCRLVCRHWRDLVDD----RTPEMRSRAKALVLVH------AV 60
Query: 87 AMVLAD-DTGATYQLTRPMASRSLFVHNSCNGLLCLGDSTGAVQLLNPTTGE---SATLP 142
A V D G QL R + + +CNGL+ L + + L+NP TGE A +P
Sbjct: 61 AHVFDDLPEGRRRQLL--PNCRGVDIVGTCNGLVFLCEWSRGFALVNPFTGERVDGAGVP 118
Query: 143 MPMYTAGSSQ---FSSCNWHCLGFCPSTKEHKVVHFYLGAHFDSFNVCCEIFTIGDK--- 196
P G + + G+ P+T +K+VHF + + T+G +
Sbjct: 119 PPPCPRGEEPPFYQPTHAAYAFGYHPTTGRYKIVHFPIQDRRTETFDAVRVLTLGAEEDA 178
Query: 197 --SWRQIGSFHGAPTDRG----VHVNGAVYYLTKFRYIASSRINCLNL-ESENFDVM--M 247
SWR + G + RG V V+G+ Y++T+ + R+ L+L + E + +
Sbjct: 179 STSWRDVPMPAGGSSRRGSCGVVSVDGSTYWITR----DTERVMSLDLGDDERVAAVTPL 234
Query: 248 LPPRKSYGG-HCSLAELEGKLCLLV 271
LP R + G C L ++ G+L + V
Sbjct: 235 LPARTAGPGCTCKLTDVRGRLGVAV 259
>Os09g0448100 Cyclin-like F-box domain containing protein
Length = 432
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 155/377 (41%), Gaps = 49/377 (12%)
Query: 28 DVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQK----LLLFANDKAND 83
DV+ + LP+++L + VCK+W + ++ P F HL+ S++ ++ A +K D
Sbjct: 71 DVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMVPGAYEKQED 130
Query: 84 R---SLAMVLAD-DTGATYQLTR----PMASRSLFVHNSCNGLLCLGDSTGAVQLLNPTT 135
+ MVL G T +L P+ CNGLL + + + NP+T
Sbjct: 131 GENIAFMMVLYKYHGGKTMELVHMQNFPLGIGVWTRPVHCNGLLLIPTMNLEMMICNPST 190
Query: 136 GESATLPMPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYLGAHFDSFNVCC--EIFTI 193
+ LP S + GF P + ++KV + ++ + C E+ T+
Sbjct: 191 RQIVFLP-----KVSGNICTGTRAGFGFDPHSNKYKVARSFYQRDSETQELVCKFEVLTL 245
Query: 194 GDKSWRQIGSFHGAPTD--RGVHVNGAVYYLTKFRYIASSRINCLN--LESENFDVMMLP 249
G +WRQ P D VHV GA+Y++ L L E F + P
Sbjct: 246 GTNAWRQTED-PPYPIDALTPVHVKGAIYWIVCSSLCPDPPNAFLRFCLTDEKFSLFPCP 304
Query: 250 PRKSYGGHCSLAELEGKLCLLVVEGGHDNPPRTMDILMLDSGDKTTWTHRYHISLP--WL 307
P S E+EG+LC + ++I G WT RY I +P +
Sbjct: 305 P--SNVKSVRFTEVEGELCC----ACFFSETLALEIWNCSGGQNLEWTRRYVIQIPPDVV 358
Query: 308 MPSCYFTPKHTLFHEGKIWVQLLA-RNLYCYDPSSSSTELKMACPESEF----PF----- 357
M P +F E + LLA + +Y YD + +++A S+F P+
Sbjct: 359 MKYPVERPPLIVFREKML---LLAFKKVYRYDIETCRI-VELASKVSDFTCYEPYLEKEA 414
Query: 358 -STHTF--IESIVPLRK 371
H F ES+VP+R+
Sbjct: 415 RDLHLFNYAESLVPIRE 431
>Os08g0492900
Length = 388
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 138/322 (42%), Gaps = 44/322 (13%)
Query: 9 MGGKKAKTVERNDHRLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKR 68
M +KA +E +DVL ++ +LP + CRLVC+ W + +
Sbjct: 1 MPPRKAPAMENVGVVDFPTDVLVDILSQLPTSSRRLCRLVCRRWRDTIDK----RTPERD 56
Query: 69 SQQKLLLFANDKANDRSLAMVLADDTGATYQLTRPMASRSLFVHNSCNGLLCLGDS-TGA 127
+ K+L F N+ S A V+ + G ++ +S S+ V + NGL+C+ D TGA
Sbjct: 57 VRTKMLTFVKGLDNEAS-AYVVDEARGRHRRVW--TSSCSVDVIGTRNGLICVLDGGTGA 113
Query: 128 VQLLNPTTGESATLPMPMYTAGS--SQFSSCNWH---CLGFCPSTKEHKVVH----FYLG 178
V + NP T ES ++P P F H F P+T + VVH F
Sbjct: 114 VTVANPATRESLSVPPPPPRQAGLLPCFPDARTHEAYGFAFHPATLRYAVVHVPCYFNKS 173
Query: 179 AHFDSFNVCCEIFTIG------DKSWRQI------GSFHGAPTDRGVH-VNGAVYYLTKF 225
FD+ +++T+G SWR + G F GV V+G Y++T
Sbjct: 174 GTFDAV----QVYTLGRGGRGAPPSWRSVPTPGASGRFQPG----GVACVDGVAYWITAG 225
Query: 226 RYIASSRINCLNLESENF-DVMMLPPRKSYGGHCS--LAELEGKLCLLVVEGGHDNPPRT 282
A I L+L+ V P G CS L E+ G+LC+ V + P +
Sbjct: 226 TPAA---IMSLDLKDNRVAPVKWSPETPGRGCRCSYRLTEMRGRLCVAVTVEETEKPTKR 282
Query: 283 MDILMLDSGDKTTWTHRYHISL 304
+++ ++S WT RY+I L
Sbjct: 283 VEVWWMESTRDQRWTRRYNIML 304
>Os08g0493450
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 31/262 (11%)
Query: 25 LCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQQKLLLFANDKANDR 84
+ SD L E+ LP RLVC+ W + + K L+ A+
Sbjct: 14 MPSDTLGEILRHLPPLDRRRSRLVCRQWRDAVDS----RAPARPGPAKTLVVAHG----- 64
Query: 85 SLAMVLADDT--GATYQLTRPMASRSLFVHNSCNGLLCL-----GDSTGAVQLLNPTTGE 137
A + DD G++ ++ P ++ +CNGLLC+ G +TG L NP TGE
Sbjct: 65 --AGYVFDDVPGGSSREIPSPCPLANIV--GTCNGLLCVVGTGAGFTTGGFVLSNPVTGE 120
Query: 138 SATLPMPMYTAGS-SQFSSCNWHCLGFCPSTKEHKVVHFYLGAHFDSFNVCCEIFTIGD- 195
+ +P+P ++ ++ P+T +K+V F + + +++T+G+
Sbjct: 121 ALHVPLPTRIGAPWRRWEHNEYYSFAHHPTTGLYKIVPFPVDDRWTGSFDAVQVYTLGEA 180
Query: 196 KSWRQIGSFHGAPTDRG---VHVNGAVYYLTKFRYIASSRINCLNLESENFDVMM-LP-P 250
SWR + + G+ + V V+G Y++ + + ++ L+L+ E V++ LP P
Sbjct: 181 ASWRDVPAPAGSSRRKSCGLVSVDGFTYWVA----MDTEKVMSLDLKDERITVVITLPAP 236
Query: 251 RKSYGGHCSLAELEGKLCLLVV 272
G C L E G+L + +
Sbjct: 237 ASEPGRQCRLTEAHGRLAVAAI 258
>Os02g0563800 Cyclin-like F-box domain containing protein
Length = 883
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 155/385 (40%), Gaps = 56/385 (14%)
Query: 12 KKAKTV-ERNDHRLLCSDVLTEVFHRLPARTLASCRLVCKSWMSELTDPHFVHEHLKRSQ 70
++ K+V R+ +L ++LTEV RLP +++ R C+SW + L+ F + R++
Sbjct: 26 RRRKSVPSRHAAAMLPDELLTEVCLRLPVKSILRFRAACRSWDAMLSSEEFGQLYAARAE 85
Query: 71 Q----KLLLFANDKANDRSLAMVLADDTGATYQLTRPMAS-RSLFVHNS---CNGLLCLG 122
+ LLF + AN S A+ + T L + R +V + C+GL L
Sbjct: 86 EMSSAPKLLFVSPTANFNSTAVYKCSPSKPTDDLLLTLDDVRGNYVEVTPAPCHGLSLLY 145
Query: 123 DSTG-AVQLLNPTTGESATLP----MPMYTAGSSQFSSCNWHCLGFCPSTKEHKVVHFYL 177
D A ++N TT LP + TAG LG TK++KVV +
Sbjct: 146 DGIAPAYYVMNATTRAVTRLPPFRDVAFATAG-----------LGCDARTKKYKVVRLFE 194
Query: 178 GAHFDSFNVCCEIFTIGDKS---WRQIG--------SFHGAPTDRGV-------HVNGAV 219
G + + CEI+T+G WR SF + V NG +
Sbjct: 195 GNLLEKEFLKCEIYTLGGDEGDIWRPAAGGVPFRFYSFARSAISNAVMNKLQPLFFNGYL 254
Query: 220 YYLTK-FRYIASSRINCL--NLESENFDVMMLPPRKSYGGHCSLAELEGKLCLLVVEGGH 276
++L ++ R + L +L E F + PP + G H L EL+G LC++
Sbjct: 255 HWLINPLHHVKLPRASILSFSLTDETFRWIRSPPFVASGVH--LVELDGNLCMVRDLRDR 312
Query: 277 DNPPRTMDILMLDSGDKTTWTHRYHISLPWLMPSCYFTPK--HTLFHEG------KIWVQ 328
++I L + W+ + I L +P P+ + G KI +
Sbjct: 313 STAVCKLEIWKLKDYNSGDWSLDHRIDLTGQLPRDLLEPQIVKVIGSAGSCRSGTKIIIA 372
Query: 329 LLARNLYCYDPSSSSTELKMACPES 353
+ YDP S + E + E+
Sbjct: 373 TSKHKVCSYDPVSRTLETITSISET 397
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,703,157
Number of extensions: 636920
Number of successful extensions: 1565
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1561
Number of HSP's successfully gapped: 14
Length of query: 379
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 276
Effective length of database: 11,657,759
Effective search space: 3217541484
Effective search space used: 3217541484
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)