Os09g0448100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os09g0448100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.16 | 0.221 | 6.98 | -0.775 | 0.146 | 0.422 | -0.525 | 1.09 | -0.0775 | 8.52 | 20.55 | 1636 | -- | -- |
| 23.45 | 0.226 | 7.01 | -1.03 | 0.206 | 0.493 | -0.434 | -- | -0.131 | 8.72 | 22.43 | 2006 | -- | -- |
| 22.89 | 0.223 | 6.97 | -0.767 | 0.198 | 0.441 | -- | 1.25 | -0.0707 | 8.58 | 20.3 | 2045 | -- | -- |
| 24.06 | 0.228 | 7.01 | -1.11 | 0.192 | 0.481 | -- | -- | -0.154 | 8.24 | 21.99 | 1865 | -- | -- |
| 24.29 | 0.23 | 6.97 | -0.674 | -- | 0.384 | -- | 1.41 | -0.039 | -- | 20.67 | 1578 | -- | -- |
| 30.51 | 0.259 | 6.99 | -0.921 | 0.134 | -- | -0.537 | -- | -0.0548 | 8.51 | -- | -- | -- | -- |
| 31.43 | 0.263 | 6.99 | -0.938 | 0.136 | -- | -- | -- | -0.0549 | 8.36 | -- | -- | -- | -- |
| 25.26 | 0.234 | 7.02 | -1.1 | -- | 0.45 | -- | -- | -0.161 | -- | 21.4 | 1525 | -- | -- |
| 53.13 | 0.341 | 6.98 | -- | 0.169 | 0.295 | -- | -- | 0.0101 | 6.05 | 22.54 | 1750 | -- | -- |
| 32.45 | 0.266 | 7 | -0.937 | -- | -- | -- | -- | -0.0535 | -- | -- | -- | -- | -- |
| 54.62 | 0.346 | 6.97 | -- | 0.132 | -- | -- | -- | 0.0496 | 8.88 | -- | -- | -- | -- |
| 53.81 | 0.342 | 6.96 | -- | -- | 0.219 | -- | -- | 0.0917 | -- | 29.96 | 1568 | -- | -- |
| 55.62 | 0.348 | 6.97 | -- | -- | -- | -- | -- | 0.0505 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 3 | 21.76 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 44 | 21.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 49 | 21.91 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 64 | 21.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 170 | 22.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 184 | 22.03 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 251 | 22.09 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 530 | 22.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 558 | 22.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 771 | 22.39 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 795 | 22.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 826 | 22.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 890 | 22.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |