Os01g0637100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os01g0637100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.41 | 0.371 | 7.83 | 0.479 | 1.46 | -1.1 | 1.33 | 2.97 | 0.421 | 8.46 | 25.04 | 1739 | -- | -- |
| 65.45 | 0.377 | 7.9 | -0.177 | 1.53 | -0.75 | 1.22 | -- | 0.329 | 8.41 | 22.65 | 6167 | -- | -- |
| 67.94 | 0.384 | 7.84 | 0.479 | 1.46 | -1.09 | -- | 2.86 | 0.391 | 8.38 | 25.37 | 1729 | -- | -- |
| 70.13 | 0.39 | 7.9 | -0.157 | 1.53 | -0.761 | -- | -- | 0.326 | 8.25 | 22.85 | 6242 | -- | -- |
| 121.63 | 0.514 | 7.84 | 0.703 | -- | -2.25 | -- | 4.59 | 0.549 | -- | 24.33 | 653 | -- | -- |
| 86.39 | 0.436 | 7.94 | -0.515 | 1.56 | -- | 1.29 | -- | 0.14 | 8.37 | -- | -- | -- | -- |
| 91.54 | 0.448 | 7.94 | -0.477 | 1.56 | -- | -- | -- | 0.139 | 8.29 | -- | -- | -- | -- |
| 123.88 | 0.518 | 7.94 | -0.072 | -- | -1.9 | -- | -- | 0.343 | -- | 24.31 | 660 | -- | -- |
| 70.56 | 0.391 | 7.89 | -- | 1.52 | -0.796 | -- | -- | 0.352 | 8.25 | 22.6 | 6236 | -- | -- |
| 226.2 | 0.703 | 7.98 | -0.467 | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
| 97.55 | 0.462 | 7.93 | -- | 1.56 | -- | -- | -- | 0.192 | 8.31 | -- | -- | -- | -- |
| 124.01 | 0.519 | 7.94 | -- | -- | -1.91 | -- | -- | 0.353 | -- | 24.3 | 662 | -- | -- |
| 231.96 | 0.711 | 7.97 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.06 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 2 | 60.68 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 3 | 60.68 | humidity | 80 | 43200 | > th | dose dependent | sin | 17 | NA |
| 4 | 60.82 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 15 |
| 5 | 60.83 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 6 | 60.85 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 8 | 60.87 | humidity | 80 | 43200 | > th | dose dependent | rect. | 8 | 20 |
| 9 | 60.87 | humidity | 80 | 43200 | > th | dose dependent | rect. | 7 | 22 |
| 10 | 60.87 | humidity | 80 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 12 | 60.88 | humidity | 80 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 17 | 60.90 | humidity | 80 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 32 | 61.00 | humidity | 80 | 43200 | > th | dose dependent | no | NA | NA |
| 34 | 61.02 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 39 | 61.03 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 50 | 61.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 54 | 61.13 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 66 | 61.16 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 71 | 61.20 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 130 | 61.45 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 15 |
| 184 | 61.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 187 | 61.66 | humidity | 90 | 43200 | > th | dose independent | sin | 15 | NA |
| 208 | 61.74 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 210 | 61.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 244 | 61.83 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 278 | 61.89 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 302 | 61.95 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 313 | 61.96 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 315 | 61.97 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 327 | 62.00 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 381 | 62.15 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 400 | 62.19 | humidity | 80 | 43200 | > th | dose dependent | sin | 4 | NA |
| 421 | 62.24 | humidity | 90 | 43200 | < th | dose independent | sin | 7 | NA |
| 456 | 62.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 484 | 62.37 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 503 | 62.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 528 | 62.47 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 530 | 62.48 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 563 | 62.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 566 | 62.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 626 | 62.68 | humidity | 80 | 43200 | > th | dose independent | sin | 1 | NA |
| 637 | 62.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 660 | 62.75 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 713 | 62.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 747 | 62.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 759 | 63.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 784 | 63.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 796 | 63.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 961 | 63.39 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 967 | 63.40 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 978 | 63.42 | humidity | 70 | 43200 | > th | dose dependent | sin | 1 | NA |