Os09g0372900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os09g0372900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.13 | 0.24 | 9.71 | 0.335 | 0.997 | 0.77 | 0.245 | 2.45 | 0.229 | 3.48 | 13.38 | 4942 | -- | -- |
| 28.62 | 0.249 | 9.76 | 0.0303 | 0.994 | 0.58 | -0.0244 | -- | 0.244 | 3.57 | 27.2 | 5390 | -- | -- |
| 26.23 | 0.239 | 9.72 | 0.318 | 0.966 | 0.816 | -- | 2.49 | 0.216 | 3.45 | 13.11 | 5478 | -- | -- |
| 27.86 | 0.246 | 9.78 | -0.0843 | 0.961 | 0.52 | -- | -- | 0.217 | 3.44 | 27.42 | 5492 | -- | -- |
| 77.66 | 0.41 | 9.72 | 0.34 | -- | 0.934 | -- | 2.57 | 0.227 | -- | 13.13 | 4013 | -- | -- |
| 39 | 0.293 | 9.78 | 0.0936 | 1.01 | -- | 0.285 | -- | 0.208 | 3.34 | -- | -- | -- | -- |
| 39.26 | 0.293 | 9.78 | 0.0882 | 1.01 | -- | -- | -- | 0.206 | 3.35 | -- | -- | -- | -- |
| 75.86 | 0.406 | 9.8 | -0.128 | -- | 0.753 | -- | -- | 0.124 | -- | 23.84 | 2628 | -- | -- |
| 28.02 | 0.247 | 9.78 | -- | 0.963 | 0.508 | -- | -- | 0.225 | 3.43 | 27.4 | 5491 | -- | -- |
| 97.13 | 0.461 | 9.78 | 0.131 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 39.47 | 0.294 | 9.78 | -- | 1.02 | -- | -- | -- | 0.196 | 3.35 | -- | -- | -- | -- |
| 76.32 | 0.407 | 9.8 | -- | -- | 0.72 | -- | -- | 0.141 | -- | 23.9 | 2628 | -- | -- |
| 97.58 | 0.461 | 9.78 | -- | -- | -- | -- | -- | 0.218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 2 | 25.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 3 | 25.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 10 | 25.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 11 | 25.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 12 | 25.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 13 | 25.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 20 | 25.51 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 22 | 25.52 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 23 | 25.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 65 | 25.76 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 67 | 25.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 77 | 25.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 80 | 25.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 81 | 25.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 82 | 25.83 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 92 | 25.86 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 106 | 25.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 112 | 25.89 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 118 | 25.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 130 | 25.90 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 157 | 25.92 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 18 | 13 |
| 214 | 25.95 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 216 | 25.95 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 255 | 25.96 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 264 | 25.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 295 | 25.98 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 328 | 25.99 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 409 | 26.01 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 438 | 26.01 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 447 | 26.02 | temperature | 25.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 460 | 26.02 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 508 | 26.03 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 554 | 26.04 | temperature | 25.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 574 | 26.04 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 609 | 26.05 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 610 | 26.05 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 627 | 26.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 667 | 26.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 19 |
| 671 | 26.06 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 690 | 26.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 748 | 26.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 749 | 26.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 751 | 26.07 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 794 | 26.07 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 802 | 26.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 803 | 26.08 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 810 | 26.08 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 821 | 26.08 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 889 | 26.09 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 921 | 26.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 923 | 26.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 980 | 26.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 23 |