Os02g0199500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0199500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.93 | 0.315 | 8.67 | 0.302 | 0.715 | 0.514 | 0.377 | 1.78 | 0.167 | 1.11 | 19.18 | 1670 | -- | -- |
| 47.51 | 0.321 | 8.7 | -0.0557 | 0.662 | 0.629 | 0.379 | -- | 0.102 | 1.49 | 24.31 | 2322 | -- | -- |
| 44.98 | 0.312 | 8.67 | 0.306 | 0.624 | 0.527 | -- | 1.94 | 0.173 | 0.935 | 18.55 | 1157 | -- | -- |
| 47.13 | 0.32 | 8.72 | -0.186 | 0.632 | 0.574 | -- | -- | 0.082 | 1.19 | 24.14 | 2436 | -- | -- |
| 65.8 | 0.378 | 8.68 | 0.153 | -- | 0.923 | -- | 1.84 | 0.102 | -- | 17.51 | 1009 | -- | -- |
| 57.32 | 0.355 | 8.7 | 0.0188 | 0.725 | -- | 0.393 | -- | 0.163 | 1.02 | -- | -- | -- | -- |
| 57.96 | 0.357 | 8.7 | 0.00463 | 0.724 | -- | -- | -- | 0.161 | 1.02 | -- | -- | -- | -- |
| 66.57 | 0.38 | 8.72 | -0.22 | -- | 0.888 | -- | -- | 0.0623 | -- | 24 | 1021 | -- | -- |
| 47.96 | 0.323 | 8.71 | -- | 0.636 | 0.531 | -- | -- | 0.11 | 1.17 | 24.3 | 2438 | -- | -- |
| 90.56 | 0.445 | 8.69 | 0.0319 | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
| 57.96 | 0.356 | 8.7 | -- | 0.724 | -- | -- | -- | 0.16 | 1.02 | -- | -- | -- | -- |
| 67.75 | 0.383 | 8.71 | -- | -- | 0.828 | -- | -- | 0.0875 | -- | 24.1 | 1022 | -- | -- |
| 90.59 | 0.444 | 8.69 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 7 | 42.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 13 | 16 |
| 11 | 42.43 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 12 | 42.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 14 | 42.62 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 18 | 42.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 19 | 42.73 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 14 |
| 26 | 42.78 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 28 | 42.84 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 48 | 43.19 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 53 | 43.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 56 | 43.32 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 83 | 43.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 14 |
| 103 | 43.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 107 | 43.82 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 113 | 43.86 | temperature | 30.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 116 | 43.86 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 19 |
| 130 | 43.94 | temperature | 15.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 154 | 44.03 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 188 | 44.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 11 |
| 195 | 44.17 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 227 | 44.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 237 | 44.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 238 | 44.33 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 245 | 44.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 250 | 44.36 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 252 | 44.36 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 258 | 44.38 | wind | 9.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 259 | 44.38 | wind | 9.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 267 | 44.40 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 284 | 44.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 312 | 44.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 321 | 44.49 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 19 | 17 |
| 344 | 44.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 356 | 44.55 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 360 | 44.56 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 411 | 44.61 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 425 | 44.63 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 19 | 5 |
| 426 | 44.63 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 516 | 44.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 12 |
| 543 | 44.73 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 551 | 44.74 | wind | 7.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 639 | 44.80 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 668 | 44.82 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 14 | 16 |
| 712 | 44.84 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 720 | 44.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 732 | 44.86 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 766 | 44.88 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 768 | 44.88 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 16 | NA |
| 814 | 44.90 | radiation | 1.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 834 | 44.91 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 841 | 44.91 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 879 | 44.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 884 | 44.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 943 | 44.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 968 | 44.97 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 14 |
| 978 | 44.98 | temperature | 25.0 | 720 | < th | dose independent | rect. | 6 | 19 |
| 987 | 44.98 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 995 | 44.99 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 8 | NA |