BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0470700 Os08g0470700|J075067N02
(194 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0470700 Carbonic anhydrase, eukaryotic family protein 356 7e-99
Os08g0470200 Similar to Nectarin III 203 8e-53
Os08g0423500 Carbonic anhydrase, eukaryotic family protein 166 9e-42
Os08g0423600 165 2e-41
Os08g0424100 Carbonic anhydrase, eukaryotic family protein 157 4e-39
Os12g0153500 Carbonic anhydrase, eukaryotic family protein 137 4e-33
Os02g0533300 Carbonic anhydrase, eukaryotic family protein 123 8e-29
Os09g0454500 Carbonic anhydrase, eukaryotic family protein 110 9e-25
Os06g0610100 Similar to Storage protein precursor 96 2e-20
Os11g0153200 Carbonic anhydrase, eukaryotic family protein 75 4e-14
AK108854 65 4e-11
>Os08g0470700 Carbonic anhydrase, eukaryotic family protein
Length = 194
Score = 356 bits (913), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 173/194 (89%), Positives = 173/194 (89%)
Query: 1 MHSSTXXXXXXXXXXXXXXXXXXXXXQETDDERKFGYVPGTENGPGNWSRLDPRWAKCNT 60
MHSST QETDDERKFGYVPGTENGPGNWSRLDPRWAKCNT
Sbjct: 1 MHSSTRARLLLAAAVLLLSAAPAARAQETDDERKFGYVPGTENGPGNWSRLDPRWAKCNT 60
Query: 61 GNMQSPIDLSHERLMRNLGYLDYSYLPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLK 120
GNMQSPIDLSHERLMRNLGYLDYSYLPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLK
Sbjct: 61 GNMQSPIDLSHERLMRNLGYLDYSYLPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLK 120
Query: 121 QLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAVIGNLYQIGNPDPFLLMVCLISTRNCY 180
QLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAVIGNLYQIGNPDPFLLMVCLISTRNCY
Sbjct: 121 QLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAVIGNLYQIGNPDPFLLMVCLISTRNCY 180
Query: 181 GNFAGLTATLSILL 194
GNFAGLTATLSILL
Sbjct: 181 GNFAGLTATLSILL 194
>Os08g0470200 Similar to Nectarin III
Length = 218
Score = 203 bits (516), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
Query: 27 QETDDERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHER--LMRNLGYLDYS 84
+ETD E +F Y+ G E GP +W +L P WA+C G MQSPIDLSHER L+R+LGYLD S
Sbjct: 28 EETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDS 87
Query: 85 YLPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLV 144
Y AEAS+VNRGHDI V+F G+AG VVING AY L+QLHWH+P+EH+V+GRRYDMELH+V
Sbjct: 88 YRAAEASIVNRGHDIMVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMV 147
Query: 145 HDDGNSNTAVIGNLYQIGNPDPFL 168
H+ AVIG LY++G PD FL
Sbjct: 148 HESAEKKAAVIGLLYEVGRPDRFL 171
>Os08g0423500 Carbonic anhydrase, eukaryotic family protein
Length = 276
Score = 166 bits (420), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
Query: 31 DERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLS--HERLMRNLGYLDYSYLPA 88
++ + Y+PG+ GP NW L P WA C++G MQSPI+L L LG L+Y+Y A
Sbjct: 32 EDDGYSYIPGSPRGPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYQNA 91
Query: 89 EASMVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDDG 148
AS+VNRGHDI V+F G+AG + ING AY+L+Q+HWHTPSEHT++GRRYDMELH+VH +
Sbjct: 92 NASVVNRGHDIMVRFDGDAGSLKINGTAYQLRQMHWHTPSEHTIDGRRYDMELHMVHLNA 151
Query: 149 NSNTAVIGNLYQIGNPDPFL 168
+ AVIG LY IG D FL
Sbjct: 152 QNQAAVIGILYTIGTRDEFL 171
>Os08g0423600
Length = 276
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Query: 31 DERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLS--HERLMRNLGYLDYSYLPA 88
++ + Y+PG+ GP NW L P WA C++G MQSPI+L L LG L+Y+Y A
Sbjct: 31 EDDGYSYIPGSPRGPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYKNA 90
Query: 89 EASMVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDDG 148
AS+VNRGHDI V+F G+AG + ING AY+L+Q+HWHTPSEHT++GRRYDMELH+VH +
Sbjct: 91 NASVVNRGHDIMVRFDGDAGSLKINGTAYQLRQMHWHTPSEHTIDGRRYDMELHMVHLNA 150
Query: 149 NSNTAVIGNLYQIG-NPDPFL 168
+ AVIG LY IG PD FL
Sbjct: 151 QNQAAVIGILYTIGTTPDEFL 171
>Os08g0424100 Carbonic anhydrase, eukaryotic family protein
Length = 277
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 100/148 (67%), Gaps = 9/148 (6%)
Query: 28 ETDDERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLS--HERLMRNLGYLDYSY 85
E DD+ FGY+PGT GP NW L P WA C++G MQSPI+L L LG L+Y+Y
Sbjct: 27 EEDDQ--FGYIPGTPRGPENWGSLKPEWATCSSGEMQSPINLGLLDLTLAPGLGDLNYTY 84
Query: 86 LPAEASMVNRGHDIEVKFMGNAGR-----VVINGKAYKLKQLHWHTPSEHTVNGRRYDME 140
A A++VNRGHDI V+F G +VING AY+L+Q+HWH PSEH V+GRRYDME
Sbjct: 85 RNANATVVNRGHDIMVRFDGGDDAAAAGGLVINGTAYRLRQVHWHAPSEHAVDGRRYDME 144
Query: 141 LHLVHDDGNSNTAVIGNLYQIGNPDPFL 168
LH+VH + + TAV+G LY IG D FL
Sbjct: 145 LHMVHLNTQNQTAVVGILYAIGAQDEFL 172
>Os12g0153500 Carbonic anhydrase, eukaryotic family protein
Length = 281
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 28 ETDDERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHERLM--RNLGYLDYSY 85
E ++ F Y+ G +GP NW +L P + C G QSPID++ + ++ +L LD +Y
Sbjct: 25 EGNEGPDFTYIEGAMDGPSNWGKLSPEYRMCGEGRSQSPIDINTKTVVPRSDLDTLDRNY 84
Query: 86 LPAEASMVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVH 145
A++VN G DI +KF G G+V+I GK Y+ + +HWH PSEHT+NGRR+ +ELHLVH
Sbjct: 85 NAVNATIVNNGKDITMKFHGEVGQVIIAGKPYRFQAIHWHAPSEHTINGRRFPLELHLVH 144
Query: 146 -DDGNSNTAVIGNLYQIGNPDPFLL 169
D + AVI LY++G PD F L
Sbjct: 145 KSDADGGLAVISVLYKLGAPDSFYL 169
>Os02g0533300 Carbonic anhydrase, eukaryotic family protein
Length = 266
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 30 DDERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHERLMRN--LGYLDYSYLP 87
D + FGY T GP +W L P + C+ G QSPI++ + + N L L+ Y
Sbjct: 25 DSDVVFGYSGST--GPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTA 82
Query: 88 AEASMVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDD 147
A ++V+ +I +++ AG V ++GK YKL+QLHWH+PSEHT+NG+R+ +ELH+VH
Sbjct: 83 ANTTIVDNVFNIALRYNDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHS 142
Query: 148 GNSNTAVIGNLYQIGNPDPFLLMV 171
+ N VI LY+ G PDPFL +
Sbjct: 143 DDGNITVIAVLYRHGKPDPFLFQI 166
>Os09g0454500 Carbonic anhydrase, eukaryotic family protein
Length = 223
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 35 FGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHERLMRNLGYLDYSYLPAEASMVN 94
FGY GP W L WA C G QSPID++ + L +Y ++ N
Sbjct: 56 FGY-ENDATGPAKWGSLHKEWAVCGDGKKQSPIDITTVEPQKVKEPLMQAYKAGATTIQN 114
Query: 95 RGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAV 154
RGHD +K+ ++ + GK Y LKQ+HWH PSEHT+NG R+D E+H+VH+D + AV
Sbjct: 115 RGHDYMLKWKDGNSKLTVQGKEYTLKQVHWHEPSEHTINGTRFDAEMHMVHEDPSMARAV 174
Query: 155 IGNLYQIGNPDPFLLMVCLIST 176
+ L P ++ +++T
Sbjct: 175 VSVLLSTKAGQPNAVLTEVVTT 196
>Os06g0610100 Similar to Storage protein precursor
Length = 192
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 92 MVNRGHDIEVKFMGNAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVH--DDGN 149
+VNRGHDI V+F G+AG VV++G+ Y L+Q+HWH+PSEH V+GRRYD+ELH++H + +
Sbjct: 98 LVNRGHDIMVRFDGDAGGVVVDGETYALRQMHWHSPSEHAVDGRRYDLELHMLHQSETRD 157
Query: 150 SNTAVIGNLYQIGN-PDPFLLMVCLIST 176
AV+ L+ IG+ D L MV + +
Sbjct: 158 GRYAVVAQLFDIGHRRDATLDMVITLCS 185
>Os11g0153200 Carbonic anhydrase, eukaryotic family protein
Length = 182
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 106 NAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAVIGNLYQIGNPD 165
G V +NGK Y +++HWH PSEHT+NG ++ +EL +VH + + AVI LY+ G PD
Sbjct: 10 KVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILYKYGAPD 69
Query: 166 PFLLMV 171
F +
Sbjct: 70 SFYFQL 75
>AK108854
Length = 287
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 38/166 (22%)
Query: 39 PGTENGPGNWSRLDPRWAK--------CNTGNMQSPIDL--SHERLMR------NLGYLD 82
P NGP N + +AK C+TG QSPI++ S +R LD
Sbjct: 19 PAPTNGPTNEQPVAWNYAKGGADWPGLCSTGKAQSPININTSATTCVRAGEPDAKPFRLD 78
Query: 83 YSYLPAEA-SMVNRGHDIEVKFMGNAGRVVI------NGKAYKLKQLHWHTPSEHTVNGR 135
+ Y PAE ++ N GH ++VK G+ G + I +G+ Y +KQ+++H PSEHT+N
Sbjct: 79 FHYKPAEGLTLSNNGHSLQVK--GDLGFITIGGCNPCDGQKYHVKQVNFHAPSEHTINTE 136
Query: 136 RYD-----MELHLVHDDGNSN------TAVIGNLYQI--GNPDPFL 168
Y ME H++H S+ T VI Q G P+PFL
Sbjct: 137 PYKDGHYVMETHIIHQKEGSSGLNDLATVVILWYKQQPGGFPNPFL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,716,701
Number of extensions: 285796
Number of successful extensions: 513
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 504
Number of HSP's successfully gapped: 11
Length of query: 194
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 99
Effective length of database: 12,075,471
Effective search space: 1195471629
Effective search space used: 1195471629
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)