Os02g0533300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Carbonic anhydrase, eukaryotic family protein.
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Os02g0533300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Carbonic anhydrase, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.87 | 0.711 | 10.6 | -5.24 | 1.88 | 2.36 | -0.0353 | -8.82 | -0.668 | 13.7 | 25.7 | 1141 | -- | -- |
| 249.99 | 0.736 | 10.3 | -3.29 | 1.77 | 1.4 | 0.126 | -- | -0.149 | 13.7 | 26.06 | 1182 | -- | -- |
| 228.87 | 0.705 | 10.6 | -5.23 | 1.88 | 2.36 | -- | -8.78 | -0.666 | 13.7 | 25.69 | 1140 | -- | -- |
| 249.35 | 0.735 | 10.3 | -3.18 | 1.82 | 1.39 | -- | -- | -0.144 | 13.9 | 26.3 | 1172 | -- | -- |
| 341.38 | 0.861 | 10.5 | -3.98 | -- | 2.51 | -- | -3.95 | -0.676 | -- | 20.49 | 11 | -- | -- |
| 321.47 | 0.841 | 10.3 | -2.79 | 1.58 | -- | 0.0759 | -- | -0.0938 | 14.1 | -- | -- | -- | -- |
| 321.49 | 0.84 | 10.3 | -2.79 | 1.58 | -- | -- | -- | -0.0934 | 14.1 | -- | -- | -- | -- |
| 346.27 | 0.867 | 10.4 | -3.38 | -- | 2.6 | -- | -- | -0.527 | -- | 17.1 | 13 | -- | -- |
| 503.93 | 1.05 | 10.2 | -- | 1.77 | 1.01 | -- | -- | 0.233 | 13.6 | 27.34 | 1049 | -- | -- |
| 471.19 | 1.01 | 10.3 | -2.85 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 526.29 | 1.07 | 10.3 | -- | 1.63 | -- | -- | -- | 0.217 | 14.2 | -- | -- | -- | -- |
| 625.62 | 1.17 | 10.3 | -- | -- | 1.59 | -- | -- | -0.0364 | -- | 19.82 | 24 | -- | -- |
| 686 | 1.22 | 10.3 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.63 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 2 | 224.73 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 4 | 225.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 10 | 225.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 12 | 226.10 | wind | 3 | 43200 | > th | dose dependent | sin | 0 | NA |
| 15 | 226.27 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 20 | 226.47 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 21 | 226.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 49 | 227.26 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 63 | 227.46 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 80 | 227.91 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 90 | 228.03 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 91 | 228.08 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 22 |
| 93 | 228.11 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 162 | 228.86 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 177 | 229.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 178 | 229.03 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 180 | 229.04 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 193 | 229.11 | wind | 9 | 43200 | < th | dose dependent | sin | 1 | NA |
| 206 | 229.25 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 243 | 229.51 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 263 | 229.61 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 15 |
| 264 | 229.63 | wind | 3 | 43200 | > th | dose dependent | no | NA | NA |
| 267 | 229.64 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 276 | 229.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 340 | 230.15 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 348 | 230.23 | wind | 5 | 43200 | > th | dose independent | sin | 22 | NA |
| 388 | 230.55 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 393 | 230.57 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 435 | 230.77 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 441 | 230.80 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 445 | 230.81 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 481 | 231.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 19 |
| 513 | 231.19 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 523 | 231.23 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 563 | 231.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 13 |
| 580 | 231.52 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 20 |
| 581 | 231.52 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 590 | 231.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 599 | 231.59 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 832 | 232.38 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 871 | 232.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 902 | 232.65 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 964 | 232.84 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 988 | 232.91 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 23 |