BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0533300 Os02g0533300|J065066G23
(266 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52720.1 | chr3:19538804-19541116 REVERSE LENGTH=285 253 6e-68
AT1G08080.1 | chr1:2517022-2518546 REVERSE LENGTH=276 213 1e-55
AT1G08065.1 | chr1:2511788-2513341 REVERSE LENGTH=278 182 1e-46
AT5G04180.1 | chr5:1147907-1149237 REVERSE LENGTH=278 181 4e-46
AT4G20990.1 | chr4:11219772-11221126 FORWARD LENGTH=268 179 9e-46
AT2G28210.1 | chr2:12029997-12032338 FORWARD LENGTH=218 177 5e-45
AT4G21000.1 | chr4:11222529-11223756 FORWARD LENGTH=261 154 4e-38
AT5G56330.1 | chr5:22813768-22816162 FORWARD LENGTH=351 130 6e-31
>AT3G52720.1 | chr3:19538804-19541116 REVERSE LENGTH=285
Length = 284
Score = 253 bits (647), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 116/253 (45%), Positives = 167/253 (66%), Gaps = 2/253 (0%)
Query: 11 VALLCTHILVNHACDSDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYN 70
++L+C I A VVFGY G GP WG L+P+FTTC+ G QSPI+I + YN
Sbjct: 14 MSLIC--IAPADAQTEGVVFGYKGKNGPNQWGHLNPHFTTCAVGKLQSPIDIQRRQIFYN 71
Query: 71 PKLEPLEMDYTAANTTIVDNVFNIALRYNDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQ 130
KL + +Y N T+V++V N+A+ + + AG V ++ K Y L Q+HWH+PSEH ++G
Sbjct: 72 HKLNSIHREYYFTNATLVNHVCNVAMFFGEGAGDVIIENKNYTLLQMHWHTPSEHHLHGV 131
Query: 131 RFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGL 190
++A ELHMVH + DG+ V+A L++ G +PFL Q+K+KL L E K + VG
Sbjct: 132 QYAAELHMVHQAKDGSFAVVASLFKIGTEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGR 191
Query: 191 VDMRELKKGADRYFRYVGSLTTPPCTENVIWNIFGEIREMTKEQAAALRAPLHGSYRHNR 250
+D R +++ +Y+RY+GSLTTPPC+ENV W I G++R M+KEQ LR+PL S+++N
Sbjct: 192 IDTRHIERKTRKYYRYIGSLTTPPCSENVSWTILGKVRSMSKEQVELLRSPLDTSFKNNS 251
Query: 251 RPTQPLNGRTVQL 263
RP QPLNGR V++
Sbjct: 252 RPCQPLNGRRVEM 264
>AT1G08080.1 | chr1:2517022-2518546 REVERSE LENGTH=276
Length = 275
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 146/227 (64%), Gaps = 5/227 (2%)
Query: 37 GPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAANTTIVDNVFNIAL 96
GPE WG L P + C KG QSPI+++ + L L DY +N T+ + +I L
Sbjct: 49 GPERWGELKPEWEMCGKGEMQSPIDLMNERVNIVSHLGRLNRDYNPSNATLKNRGHDIML 108
Query: 97 RYNDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRH 156
++ D AGT+K++G +Y+L+QLHWHSPSEHTING+RFA+ELHMVH + + V+ VLY+
Sbjct: 109 KFEDGAGTIKINGFEYELQQLHWHSPSEHTINGRRFALELHMVHEGRNRRMAVVTVLYKI 168
Query: 157 GKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCT 216
G+ D F+ ++ +L + E +AEK VG++D ++K G+ +Y+RY GSLTTPPCT
Sbjct: 169 GRADTFIRSLEKELEGI-AEMEEAEKN----VGMIDPTKIKIGSRKYYRYTGSLTTPPCT 223
Query: 217 ENVIWNIFGEIREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTVQL 263
+NV W++ ++R +T++Q LR +H N RP QP N R V L
Sbjct: 224 QNVTWSVVRKVRTVTRKQVKLLRVAVHDDANSNARPVQPTNKRIVHL 270
>AT1G08065.1 | chr1:2511788-2513341 REVERSE LENGTH=278
Length = 277
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 142/260 (54%), Gaps = 10/260 (3%)
Query: 9 IFVALLCTHILVNHA-CDSDVVFGYS--GSTGPEHWGSLSPNFTTCSKGTYQSPINILKD 65
IF+++ +H + + F Y G GPE+WG L P + C KG QSPI++
Sbjct: 13 IFISITIVSSSPDHGEVEDETQFNYEKKGEKGPENWGRLKPEWAMCGKGNMQSPIDLTDK 72
Query: 66 DAVYNPKLEPLEMDYTAANTTIVDNVFNIALRYND-TAGT-VKVDGKKYKLRQLHWHSPS 123
+ + L L Y +N TI + +I +++ AG + ++G +YKL+Q+HWHSPS
Sbjct: 73 RVLIDHNLGYLRSQYLPSNATIKNRGHDIMMKFEGGNAGLGITINGTEYKLQQIHWHSPS 132
Query: 124 EHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKG 183
EHT+NG+RF +E HMVH S DG V+A Y+ GKPD FL ++ YL+
Sbjct: 133 EHTLNGKRFVLEEHMVHQSKDGRNAVVAFFYKLGKPDYFLLTLER-----YLKRITDTHE 187
Query: 184 EPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTENVIWNIFGEIREMTKEQAAALRAPLH 243
V +V R + Y+R++GSLTTPPC+ENVIW I E+R +T +Q LR +H
Sbjct: 188 SQEFVEMVHPRTFGFESKHYYRFIGSLTTPPCSENVIWTISKEMRTVTLKQLIMLRVTVH 247
Query: 244 GSYRHNRRPTQPLNGRTVQL 263
N RP Q N R V L
Sbjct: 248 DQSNSNARPLQRKNERPVAL 267
>AT5G04180.1 | chr5:1147907-1149237 REVERSE LENGTH=278
Length = 277
Score = 181 bits (459), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 6/228 (2%)
Query: 38 PEHWGSLSPNFTTCSKGTYQSPINILKDDA-VYNPKLEPLEMDYTAANTTIVDNVFNIAL 96
P W S+ + C G QSPIN+ A + + E L+ Y + + F++ +
Sbjct: 36 PSKWSSIKAEWKICGTGKRQSPINLTPKIARIVHNSTEILQTYYKPVEAILKNRGFDMKV 95
Query: 97 RYNDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRH 156
++ D AG + ++ YKL Q HWH+PSEH ++GQR A+ELHMVH S +G++ VI VL+R
Sbjct: 96 KWEDDAGKIVINDTDYKLVQSHWHAPSEHFLDGQRLAMELHMVHKSVEGHLAVIGVLFRE 155
Query: 157 GKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCT 216
G+P+ F+ +I DK+ + + GE + +G +D RE +++ Y GSLTTPPCT
Sbjct: 156 GEPNAFISRIMDKIHKI----ADVQDGE-VSIGKIDPREFGWDLTKFYEYRGSLTTPPCT 210
Query: 217 ENVIWNIFGEIREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTVQLN 264
E+V+W I ++ +++EQ L G Y N RP QPLNGR V LN
Sbjct: 211 EDVMWTIINKVGTVSREQIDVLTDARRGGYEKNARPAQPLNGRLVYLN 258
>AT4G20990.1 | chr4:11219772-11221126 FORWARD LENGTH=268
Length = 267
Score = 179 bits (455), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 147/269 (54%), Gaps = 17/269 (6%)
Query: 1 MGTAKKSAIFVALLCTHIL---VNHA---CDSDVVFGYSGST--GPEHWGSLSPNFTTCS 52
M T K+ F+A+ ++ ++HA D + F Y T GPE WG ++P++ C+
Sbjct: 1 MDTNAKTIFFMAMCFIYLSFPNISHAHSEVDDETPFTYEQKTEKGPEGWGKINPHWKVCN 60
Query: 53 KGTYQSPINILKDDAVYNPKLEPLEMDYTAANTTIVDNVFNIALRYNDTAGTVKVDGKKY 112
G YQSPI+ L ++ V + Y A I + +I + + AG + + +
Sbjct: 61 TGRYQSPID-LTNERVSLIHDQAWTRQYKPAPAVITNRGHDIMVSWKGDAGKMTIRKTDF 119
Query: 113 KLRQLHWHSPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLFQIKDKLAA 172
L Q HWHSPSEHT+NG R+ +ELHMVH S G VI VLY+ G+P+ FL ++
Sbjct: 120 NLVQCHWHSPSEHTVNGTRYDLELHMVHTSARGRTAVIGVLYKLGEPNEFLTKL------ 173
Query: 173 LYLEGCKAEKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTENVIWNIFGEIREMTK 232
L G KA + + +G++D RE++ +++RY+GSLT PPCTE VIW + + ++
Sbjct: 174 --LNGIKAVGNKEINLGMIDPREIRFQTRKFYRYIGSLTVPPCTEGVIWTVVKRVNTISM 231
Query: 233 EQAAALRAPLHGSYRHNRRPTQPLNGRTV 261
EQ ALR + + N RP Q GR+V
Sbjct: 232 EQITALRQAVDDGFETNSRPVQDSKGRSV 260
>AT2G28210.1 | chr2:12029997-12032338 FORWARD LENGTH=218
Length = 217
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 25 DSDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAAN 84
+ + + ++ GP WG L P + C KG QSPI+++ L+ L Y N
Sbjct: 8 EHEFSYEWNQENGPAKWGKLRPEWKMCGKGEMQSPIDLMNKRVRLVTHLKKLTRHYKPCN 67
Query: 85 TTIVDNVFNIALRYNDT-AGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHSD 143
T+ + ++ L++ + +G++ V+G +YKL QLHWHSPSEHT+NG+RFA+ELHMVH +
Sbjct: 68 ATLKNRGHDMMLKFGEEGSGSITVNGTEYKLLQLHWHSPSEHTMNGRRFALELHMVHENI 127
Query: 144 DGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGADRY 203
+G++ V+ VLY+ G+PD FL +++KL+A+ + +AEK V ++D R++K G+ ++
Sbjct: 128 NGSLAVVTVLYKIGRPDSFLGLLENKLSAI-TDQNEAEK----YVDVIDPRDIKIGSRKF 182
Query: 204 FRYVGSLTTPPCTENVIWNIFGEI 227
+RY+GSLTTPPCT+NVIW + ++
Sbjct: 183 YRYIGSLTTPPCTQNVIWTVVKKV 206
>AT4G21000.1 | chr4:11222529-11223756 FORWARD LENGTH=261
Length = 260
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 120/220 (54%), Gaps = 13/220 (5%)
Query: 8 AIFVALLCTHILVNHACD--SDVVFGYSGST--GPEHWGSLSPNFTTCSKGTYQSPINIL 63
F+ L +IL +A + + +F Y T GP WG L P + CS G QSPI+ L
Sbjct: 13 VFFIDLFSPNILFVYAREIGNKPLFTYKQKTEKGPAEWGKLDPQWKVCSTGKIQSPID-L 71
Query: 64 KDDAVYNPKLEPLEMDYTAANTTIVDNVFNIALRYNDTAGTVKVDGKKYKLRQLHWHSPS 123
D+ V + L Y A+ I ++ + + G + + YKL Q HWHSPS
Sbjct: 72 TDERVSLIHDQALSKHYKPASAVIQSRGHDVMVSWKGDGGKITIHQTDYKLVQCHWHSPS 131
Query: 124 EHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKG 183
EHTING + +ELHMVH S G TV+ VLY+ G+PD FL +I L G K
Sbjct: 132 EHTINGTSYDLELHMVHTSASGKTTVVGVLYKLGEPDEFLTKI--------LNGIKGVGK 183
Query: 184 EPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTENVIWNI 223
+ + +G+VD R+++ + ++RY+GSLT PPCTE VIW +
Sbjct: 184 KEIDLGIVDPRDIRFETNNFYRYIGSLTIPPCTEGVIWTV 223
>AT5G56330.1 | chr5:22813768-22816162 FORWARD LENGTH=351
Length = 350
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 116/242 (47%), Gaps = 48/242 (19%)
Query: 25 DSDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAAN 84
+++ + G+ GP WG+L + C G QSPI++ + V + K L Y +N
Sbjct: 137 ETEFSYETKGNKGPAKWGTLDAEWKMCGIGKMQSPIDLRDKNVVVSNKFGLLRSQYLPSN 196
Query: 85 TTIVDNVFNIALRY---NDTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHH 141
TTI + +I L++ N G V + G +Y+L+QLHWHSPSEHTING+RFA+E H+VH
Sbjct: 197 TTIKNRGHDIMLKFKGGNKGIG-VTIRGTRYQLQQLHWHSPSEHTINGKRFALEEHLVHE 255
Query: 142 SDDGNITVIAVLYRHGKPDPFLFQIKDKLAALYLEGCKAEKGEPLPVGLVDMRELKKGAD 201
S D V+A LY G DPFLF ++ ++LKK D
Sbjct: 256 SKDKRYAVVAFLYNLGASDPFLFSLE--------------------------KQLKKITD 289
Query: 202 RYFRYVGSLTTPPCTENVIWNIFGEIREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTV 261
T E+ IR ++ +Q LR +H + N RP Q +N R V
Sbjct: 290 ----------THASEEH--------IRTVSSKQVKLLRVAVHDASDSNARPLQAVNKRKV 331
Query: 262 QL 263
L
Sbjct: 332 YL 333
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,303,994
Number of extensions: 280609
Number of successful extensions: 546
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 534
Number of HSP's successfully gapped: 8
Length of query: 266
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 169
Effective length of database: 8,447,217
Effective search space: 1427579673
Effective search space used: 1427579673
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)