Os08g0423500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Carbonic anhydrase, eukaryotic family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0423500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Carbonic anhydrase, eukaryotic family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.81 | 0.561 | 6.02 | -0.456 | 0.742 | 1.97 | 0.355 | 0.915 | -0.358 | 10 | 23.64 | 465 | -- | -- |
| 143.57 | 0.558 | 6 | -0.332 | 0.746 | 1.81 | 0.46 | -- | -0.326 | 9.98 | 23.99 | 461 | -- | -- |
| 143.22 | 0.557 | 6.01 | -0.466 | 0.754 | 2.01 | -- | 1.06 | -0.36 | 10.1 | 23.6 | 440 | -- | -- |
| 144.35 | 0.56 | 6 | -0.315 | 0.764 | 1.84 | -- | -- | -0.328 | 10.1 | 23.9 | 440 | -- | -- |
| 165.57 | 0.599 | 6.01 | -0.361 | -- | 2.12 | -- | 0.85 | -0.229 | -- | 25.8 | 693 | -- | -- |
| 188.62 | 0.644 | 6.07 | -0.792 | 0.876 | -- | 0.428 | -- | -0.649 | 9.54 | -- | -- | -- | -- |
| 189.3 | 0.644 | 6.07 | -0.776 | 0.874 | -- | -- | -- | -0.648 | 9.54 | -- | -- | -- | -- |
| 166.06 | 0.6 | 5.99 | -0.21 | -- | 2.03 | -- | -- | -0.198 | -- | 26.1 | 687 | -- | -- |
| 146.73 | 0.564 | 5.99 | -- | 0.736 | 1.95 | -- | -- | -0.269 | 10.1 | 23.96 | 461 | -- | -- |
| 234.33 | 0.715 | 6.09 | -0.782 | -- | -- | -- | -- | -0.646 | -- | -- | -- | -- | -- |
| 205.16 | 0.67 | 6.05 | -- | 0.875 | -- | -- | -- | -0.562 | 9.61 | -- | -- | -- | -- |
| 167.1 | 0.602 | 5.98 | -- | -- | 2.11 | -- | -- | -0.16 | -- | 26.1 | 693 | -- | -- |
| 250.47 | 0.739 | 6.07 | -- | -- | -- | -- | -- | -0.559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.57 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 5 | 142.82 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 11 | 143.05 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 43 | 144.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 110 | 145.63 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 145.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 127 | 146.25 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 128 | 146.30 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 133 | 146.38 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 135 | 146.40 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 141 | 146.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 160 | 146.72 | temperature | 15.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 208 | 147.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 213 | 147.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 239 | 148.06 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 261 | 148.30 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 335 | 149.20 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 338 | 149.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 405 | 149.72 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 439 | 150.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 466 | 150.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 469 | 150.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 492 | 150.37 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 502 | 150.50 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 568 | 150.88 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 20 |
| 713 | 151.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 756 | 151.79 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 766 | 151.82 | temperature | 25.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 772 | 151.85 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 803 | 151.94 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 879 | 152.16 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 883 | 152.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 889 | 152.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |