Os08g0470700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Carbonic anhydrase, eukaryotic family protein.
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Os08g0470700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Carbonic anhydrase, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 271.84 | 0.775 | 7.83 | -6.13 | 1.42 | 7 | -0.0556 | -0.216 | -0.195 | 8.14 | 8.892 | 5517 | -- | -- |
| 271.89 | 0.768 | 7.83 | -6.08 | 1.42 | 7.01 | -0.0682 | -- | -0.188 | 8.15 | 8.524 | 5518 | -- | -- |
| 271.85 | 0.768 | 7.83 | -6.13 | 1.42 | 7 | -- | -0.212 | -0.195 | 8.14 | 8.944 | 5517 | -- | -- |
| 271.89 | 0.768 | 7.82 | -6.08 | 1.43 | 7.01 | -- | -- | -0.181 | 8.15 | 8.976 | 5513 | -- | -- |
| 372.12 | 0.898 | 7.88 | -6.13 | -- | 6.98 | -- | -0.15 | -0.229 | -- | 9.326 | 5732 | -- | -- |
| 1084.92 | 1.54 | 7.5 | -2.76 | 1.44 | -- | -0.372 | -- | 1.27 | 7.18 | -- | -- | -- | -- |
| 1085.29 | 1.54 | 7.5 | -2.76 | 1.44 | -- | -- | -- | 1.27 | 7.18 | -- | -- | -- | -- |
| 372.15 | 0.898 | 7.87 | -6.11 | -- | 7 | -- | -- | -0.223 | -- | 9.507 | 5733 | -- | -- |
| 905.25 | 1.4 | 7.58 | -- | 1.35 | 4.38 | -- | -- | 0.924 | 7.81 | -14.47 | 1488 | -- | -- |
| 1195.28 | 1.62 | 7.53 | -2.74 | -- | -- | -- | -- | 1.3 | -- | -- | -- | -- | -- |
| 1286.67 | 1.68 | 7.43 | -- | 1.41 | -- | -- | -- | 1.58 | 7.3 | -- | -- | -- | -- |
| 1003.11 | 1.48 | 7.61 | -- | -- | 4.42 | -- | -- | 0.936 | -- | 0.8847 | 1437 | -- | -- |
| 1392.96 | 1.74 | 7.46 | -- | -- | -- | -- | -- | 1.6 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.36 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 3 | 267.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 5 | 267.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 19 | 268.39 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 24 | 269.69 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 36 | 270.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 55 | 272.58 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 67 | 273.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 68 | 273.06 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 73 | 273.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 75 | 273.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 107 | 274.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 159 | 278.18 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 160 | 278.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 214 | 278.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 219 | 278.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 230 | 278.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 243 | 278.67 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 253 | 278.69 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 255 | 278.70 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 302 | 280.23 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 327 | 280.82 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 388 | 283.40 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 392 | 283.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 413 | 283.87 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 427 | 284.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 431 | 284.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 447 | 284.90 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 466 | 285.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 553 | 289.04 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 561 | 289.91 | radiation | 30 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 595 | 290.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 597 | 290.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 606 | 290.97 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 626 | 292.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 631 | 292.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 634 | 292.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 14 | 18 |
| 645 | 292.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 663 | 292.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 692 | 293.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 711 | 294.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 725 | 294.23 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 731 | 294.29 | temperature | 30 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 839 | 295.65 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 859 | 295.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 913 | 296.71 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 938 | 297.08 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 939 | 297.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 943 | 297.12 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 957 | 297.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 23 |