Os08g0470200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nectarin III.
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Os08g0470200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nectarin III.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 338.47 | 0.864 | 8.14 | -4.15 | 1.86 | 0.48 | 3.48 | -9.73 | -0.917 | 5.46 | 8.991 | 4459 | -- | -- |
| 421.71 | 0.956 | 7.81 | -2.15 | 1.9 | 1.12 | 2.97 | -- | -0.486 | 5.38 | -26.95 | 8754 | -- | -- |
| 364.19 | 0.896 | 7.93 | -3.1 | 1.94 | 0.755 | -- | -10.7 | -0.635 | 5.49 | 8.991 | 4459 | -- | -- |
| 444.4 | 0.982 | 7.81 | -2.13 | 1.9 | 1.13 | -- | -- | -0.496 | 5.82 | -41.47 | 9258 | -- | -- |
| 532.3 | 1.08 | 7.93 | -2.87 | -- | -0.61 | -- | -11.4 | -0.429 | -- | 8.991 | 4459 | -- | -- |
| 441.22 | 0.985 | 7.73 | -1.53 | 1.87 | -- | 3.18 | -- | -0.139 | 5.47 | -- | -- | -- | -- |
| 465.25 | 1.01 | 7.73 | -1.51 | 1.9 | -- | -- | -- | -0.152 | 5.73 | -- | -- | -- | -- |
| 624.98 | 1.16 | 7.82 | -1.92 | -- | 1.15 | -- | -- | -0.343 | -- | -18.45 | 2758 | -- | -- |
| 524.49 | 1.07 | 7.7 | -- | 1.86 | 0.242 | -- | -- | -0.0179 | 5.82 | -17.09 | 1255 | -- | -- |
| 652.37 | 1.19 | 7.76 | -1.45 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 525.59 | 1.07 | 7.7 | -- | 1.88 | -- | -- | -- | 0.017 | 5.77 | -- | -- | -- | -- |
| 684.64 | 1.22 | 7.7 | -- | -- | -1.24 | -- | -- | 0.195 | -- | -18.45 | 2758 | -- | -- |
| 708.1 | 1.24 | 7.73 | -- | -- | -- | -- | -- | 0.0547 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.36 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 11 | 325.18 | humidity | 90 | 43200 | < th | dose dependent | sin | 7 | NA |
| 78 | 328.65 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 113 | 329.49 | temperature | 10 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 122 | 329.56 | temperature | 30 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 174 | 330.12 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 208 | 330.35 | humidity | 90 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 209 | 330.36 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 240 | 330.56 | humidity | 90 | 43200 | < th | dose dependent | no | NA | NA |
| 261 | 330.70 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 276 | 330.76 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 323 | 331.02 | humidity | 70 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 324 | 331.02 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 331 | 331.08 | humidity | 90 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 343 | 331.14 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 414 | 331.39 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 421 | 331.42 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 424 | 331.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 442 | 331.53 | temperature | 10 | 43200 | > th | dose dependent | sin | 3 | NA |
| 472 | 331.63 | humidity | 80 | 43200 | > th | dose independent | sin | 13 | NA |
| 489 | 331.67 | humidity | 70 | 43200 | > th | dose independent | sin | 7 | NA |
| 556 | 331.83 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 557 | 331.83 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 675 | 332.10 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 677 | 332.11 | humidity | 80 | 43200 | < th | dose independent | sin | 7 | NA |
| 701 | 332.15 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 713 | 332.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 718 | 332.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 8 |
| 723 | 332.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 729 | 332.21 | temperature | 30 | 43200 | < th | dose dependent | sin | 4 | NA |
| 818 | 332.39 | humidity | 80 | 43200 | < th | dose independent | sin | 13 | NA |
| 857 | 332.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 865 | 332.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |