BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0470200 Os08g0470200|AK060039
(218 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08080.1 | chr1:2517022-2518546 REVERSE LENGTH=276 194 3e-50
AT1G08065.1 | chr1:2511788-2513341 REVERSE LENGTH=278 184 2e-47
AT4G20990.1 | chr4:11219772-11221126 FORWARD LENGTH=268 179 8e-46
AT2G28210.1 | chr2:12029997-12032338 FORWARD LENGTH=218 178 2e-45
AT4G21000.1 | chr4:11222529-11223756 FORWARD LENGTH=261 166 9e-42
AT5G56330.1 | chr5:22813768-22816162 FORWARD LENGTH=351 159 9e-40
AT5G04180.1 | chr5:1147907-1149237 REVERSE LENGTH=278 139 8e-34
AT3G52720.1 | chr3:19538804-19541116 REVERSE LENGTH=285 113 9e-26
>AT1G08080.1 | chr1:2517022-2518546 REVERSE LENGTH=276
Length = 275
Score = 194 bits (493), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 117/158 (74%)
Query: 29 ETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSY 88
E + E EF Y DEKGPE WG+LKPEW CG GEMQSPIDL +ERV +V LG L+ Y
Sbjct: 33 EVEDEREFNYKKNDEKGPERWGELKPEWEMCGKGEMQSPIDLMNERVNIVSHLGRLNRDY 92
Query: 89 RAAEASIVNRGHDIMVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMVH 148
+ A++ NRGHDIM++F+ AG++ ING Y L+QLHWHSP+EH+++GRR+ +ELHMVH
Sbjct: 93 NPSNATLKNRGHDIMLKFEDGAGTIKINGFEYELQQLHWHSPSEHTINGRRFALELHMVH 152
Query: 149 ESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKED 186
E ++ AV+ +LY++GR D F++ +E L+ IA+ E+
Sbjct: 153 EGRNRRMAVVTVLYKIGRADTFIRSLEKELEGIAEMEE 190
>AT1G08065.1 | chr1:2511788-2513341 REVERSE LENGTH=278
Length = 277
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 2/160 (1%)
Query: 29 ETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSY 88
E + E +F Y EKGPE+WG+LKPEWA CG G MQSPIDL+ +RV + +LGYL Y
Sbjct: 28 EVEDETQFNYEKKGEKGPENWGRLKPEWAMCGKGNMQSPIDLTDKRVLIDHNLGYLRSQY 87
Query: 89 RAAEASIVNRGHDIMVRFD-GDAG-SVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHM 146
+ A+I NRGHDIM++F+ G+AG + INGT Y L+Q+HWHSP+EH+++G+R+ +E HM
Sbjct: 88 LPSNATIKNRGHDIMMKFEGGNAGLGITINGTEYKLQQIHWHSPSEHTLNGKRFVLEEHM 147
Query: 147 VHESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKED 186
VH+S + + AV+ Y++G+PD FL +E YLK I D +
Sbjct: 148 VHQSKDGRNAVVAFFYKLGKPDYFLLTLERYLKRITDTHE 187
>AT4G20990.1 | chr4:11219772-11221126 FORWARD LENGTH=268
Length = 267
Score = 179 bits (455), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 26 AQEETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLD 85
A E D E FTY EKGPE WGK+ P W C G QSPIDL++ERV L+ D +
Sbjct: 26 AHSEVDDETPFTYEQKTEKGPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAW-T 84
Query: 86 DSYRAAEASIVNRGHDIMVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELH 145
Y+ A A I NRGHDIMV + GDAG + I T + L Q HWHSP+EH+V+G RYD+ELH
Sbjct: 85 RQYKPAPAVITNRGHDIMVSWKGDAGKMTIRKTDFNLVQCHWHSPSEHTVNGTRYDLELH 144
Query: 146 MVHESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKE 185
MVH SA + AVIG+LY++G P+ FL K+ +K + +KE
Sbjct: 145 MVHTSARGRTAVIGVLYKLGEPNEFLTKLLNGIKAVGNKE 184
>AT2G28210.1 | chr2:12029997-12032338 FORWARD LENGTH=218
Length = 217
Score = 178 bits (451), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 28 EETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDS 87
E + E EF+Y E GP WGKL+PEW CG GEMQSPIDL ++RV+LV L L
Sbjct: 3 EYVEDEHEFSYEWNQENGPAKWGKLRPEWKMCGKGEMQSPIDLMNKRVRLVTHLKKLTRH 62
Query: 88 YRAAEASIVNRGHDIMVRFDGD-AGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHM 146
Y+ A++ NRGHD+M++F + +GS+ +NGT Y L QLHWHSP+EH+++GRR+ +ELHM
Sbjct: 63 YKPCNATLKNRGHDMMLKFGEEGSGSITVNGTEYKLLQLHWHSPSEHTMNGRRFALELHM 122
Query: 147 VHESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKED 186
VHE+ AV+ +LY++GRPD FL +E L I D+ +
Sbjct: 123 VHENINGSLAVVTVLYKIGRPDSFLGLLENKLSAITDQNE 162
>AT4G21000.1 | chr4:11222529-11223756 FORWARD LENGTH=261
Length = 260
Score = 166 bits (420), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 29 ETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSY 88
E ++ FTY EKGP WGKL P+W C G++QSPIDL+ ERV L+ D L Y
Sbjct: 30 EIGNKPLFTYKQKTEKGPAEWGKLDPQWKVCSTGKIQSPIDLTDERVSLIHDQA-LSKHY 88
Query: 89 RAAEASIVNRGHDIMVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMVH 148
+ A A I +RGHD+MV + GD G + I+ T Y L Q HWHSP+EH+++G YD+ELHMVH
Sbjct: 89 KPASAVIQSRGHDVMVSWKGDGGKITIHQTDYKLVQCHWHSPSEHTINGTSYDLELHMVH 148
Query: 149 ESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKE 185
SA K V+G+LY++G PD FL K+ +K + KE
Sbjct: 149 TSASGKTTVVGVLYKLGEPDEFLTKILNGIKGVGKKE 185
>AT5G56330.1 | chr5:22813768-22816162 FORWARD LENGTH=351
Length = 350
Score = 159 bits (402), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Query: 29 ETDHEEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSY 88
E + E EF+Y + KGP WG L EW CG G+MQSPIDL + V + G L Y
Sbjct: 133 EVEDETEFSYETKGNKGPAKWGTLDAEWKMCGIGKMQSPIDLRDKNVVVSNKFGLLRSQY 192
Query: 89 RAAEASIVNRGHDIMVRFDG--DAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHM 146
+ +I NRGHDIM++F G V I GT Y L+QLHWHSP+EH+++G+R+ +E H+
Sbjct: 193 LPSNTTIKNRGHDIMLKFKGGNKGIGVTIRGTRYQLQQLHWHSPSEHTINGKRFALEEHL 252
Query: 147 VHESAEKKAAVIGLLYEVGRPDRFLQKMEPYLKMIAD 183
VHES +K+ AV+ LY +G D FL +E LK I D
Sbjct: 253 VHESKDKRYAVVAFLYNLGASDPFLFSLEKQLKKITD 289
>AT5G04180.1 | chr5:1147907-1149237 REVERSE LENGTH=278
Length = 277
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 33 EEEFTYISGDEKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRD-LGYLDDSYRAA 91
E EF Y G+ P W +K EW CG G+ QSPI+L+ + ++V + L Y+
Sbjct: 23 ETEFHYKPGEIADPSKWSSIKAEWKICGTGKRQSPINLTPKIARIVHNSTEILQTYYKPV 82
Query: 92 EASIVNRGHDIMVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMVHESA 151
EA + NRG D+ V+++ DAG +VIN T Y L Q HWH+P+EH +DG+R MELHMVH+S
Sbjct: 83 EAILKNRGFDMKVKWEDDAGKIVINDTDYKLVQSHWHAPSEHFLDGQRLAMELHMVHKSV 142
Query: 152 EKKAAVIGLLYEVGRPDRFLQKMEPYLKMIADKED 186
E AVIG+L+ G P+ F+ ++ + IAD +D
Sbjct: 143 EGHLAVIGVLFREGEPNAFISRIMDKIHKIADVQD 177
>AT3G52720.1 | chr3:19538804-19541116 REVERSE LENGTH=285
Length = 284
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 43 EKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSYRAAEASIVNRGHDI 102
+ GP WG L P + C G++QSPID+ ++ L + Y A++VN ++
Sbjct: 36 KNGPNQWGHLNPHFTTCAVGKLQSPIDIQRRQIFYNHKLNSIHREYYFTNATLVNHVCNV 95
Query: 103 MVRFDGDAGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMVHESAEKKAAVIGLLY 162
+ F AG V+I Y L Q+HWH+P+EH + G +Y ELHMVH++ + AV+ L+
Sbjct: 96 AMFFGEGAGDVIIENKNYTLLQMHWHTPSEHHLHGVQYAAELHMVHQAKDGSFAVVASLF 155
Query: 163 EVGRPDRFLQKMEPYLKMIADKEDR 187
++G + FL +M+ K++ KE+R
Sbjct: 156 KIGTEEPFLSQMKE--KLVKLKEER 178
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,638,773
Number of extensions: 194434
Number of successful extensions: 432
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 426
Number of HSP's successfully gapped: 8
Length of query: 218
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 123
Effective length of database: 8,502,049
Effective search space: 1045752027
Effective search space used: 1045752027
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)