BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0431300 Os08g0431300|AK070015
(475 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase 743 0.0
Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferas... 384 e-107
Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase 372 e-103
Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferas... 175 6e-44
Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferas... 174 1e-43
Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferas... 172 5e-43
Os06g0499900 Similar to Dihydrolipoamide acetyltransferase ... 168 8e-42
AK108134 122 4e-28
Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 sub... 92 8e-19
Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 sub... 74 2e-13
>Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase
Length = 475
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/475 (81%), Positives = 388/475 (81%)
Query: 1 MATTPAPVSLSAAASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXKIREIFMPALSSTMTE 60
MATTPAPVSLSAAASTV KIREIFMPALSSTMTE
Sbjct: 1 MATTPAPVSLSAAASTVPARLLVGRGAAAAPVARRRARMVVVRAKIREIFMPALSSTMTE 60
Query: 61 GKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAGESAPVGAPIALL 120
GKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAGESAPVGAPIALL
Sbjct: 61 GKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAGESAPVGAPIALL 120
Query: 121 AESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTKGIAT 180
AESEDDLQAALAKAQELSKAHPQQ GTKGIAT
Sbjct: 121 AESEDDLQAALAKAQELSKAHPQQAPPPSDAAAPPPPPPPPAAAPAAPAPVAAGTKGIAT 180
Query: 181 PQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXXXXXXXXXXXIG 240
PQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIE IG
Sbjct: 181 PQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEPKPKVVPAASAAPVPLSAPAIG 240
Query: 241 AVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDELYEKVKSK 300
AVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDELYEKVKSK
Sbjct: 241 AVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDELYEKVKSK 300
Query: 301 GVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADK 360
GVTMTV QHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADK
Sbjct: 301 GVTMTVLLAKAAAMALAQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADK 360
Query: 361 LDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMAVG 420
LDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMAVG
Sbjct: 361 LDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMAVG 420
Query: 421 ASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
ASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL
Sbjct: 421 ASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
>Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 501
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/225 (80%), Positives = 202/225 (89%)
Query: 251 VPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDELYEKVKSKGVTMTVXXXX 310
VPGATVVPFT MQAAVS+NM+ESL+VP FRVGY + TDKLD L EKVKSKGVT T+
Sbjct: 277 VPGATVVPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTLLLVK 336
Query: 311 XXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKW 370
QHPVVNASCRDGKSF+YN++INIAVAVAI+GGL+TPVLED DKLD+YLL+QKW
Sbjct: 337 AAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQKW 396
Query: 371 KELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMAVGASKPTVVADK 430
+ L+KKAR KQLQP+EYSSGTFTLSNLGMFGVDRFDAILPPGQG IMAVG S+PT+VA+K
Sbjct: 397 RGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRPTLVANK 456
Query: 431 DGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
DGFFS+K++MLVNVTADHRI+YGADLAAFLQTFAKIIEDPESLTL
Sbjct: 457 DGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPA 107
EIFMPALSSTMTEG+IVSW+AAEGDRVAKGD VVVVESDKADMDVETF+DGIVA VLVPA
Sbjct: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
Query: 108 GESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXXXXX 167
GESAPVGAPIALLAESE+++ A A+AQ L + Q+
Sbjct: 114 GESAPVGAPIALLAESEEEVAVAQARAQALPRGPGQEPPPPHVPKAAPPPPPPPPPHAPP 173
Query: 168 XXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIE 218
TKG+ATP AKKLAKQHRVD++ V GTGP GR+T ADVEAAAGI+
Sbjct: 174 GPPP---TKGVATPHAKKLAKQHRVDISMVVGTGPHGRVTGADVEAAAGIK 221
>Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase
Length = 467
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/302 (63%), Positives = 219/302 (72%), Gaps = 20/302 (6%)
Query: 174 GTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXXXXXX 233
G + +A+P A+KLAK VDL + G+GP GRI DVEAAA
Sbjct: 186 GLRVVASPYARKLAKDLNVDLNSITGSGPGGRIVAKDVEAAAAAPKKAAP---------- 235
Query: 234 XXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDEL 293
AA P VP + VPFT MQ AVSKNMVESLAVP FRVGY TD LD L
Sbjct: 236 ----------VAAARPDVPLGSTVPFTTMQGAVSKNMVESLAVPTFRVGYTFTTDALDAL 285
Query: 294 YEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITP 353
Y+K+K KGVTM+ QHPV+N+SCRDGKSFTYN++INIAVAVAIDGGLITP
Sbjct: 286 YKKIKPKGVTMSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDGGLITP 345
Query: 354 VLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQ 413
VL DADKLDIY LS+KWKELV KARAKQLQP+EY+SGTFT+SNLGMFGVDRFDAILPPG
Sbjct: 346 VLPDADKLDIYSLSRKWKELVDKARAKQLQPHEYNSGTFTISNLGMFGVDRFDAILPPGT 405
Query: 414 GGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESL 473
G IMAVG+S+PT+V KDG +K++M VNVTADHR++YGADLAAFLQT +KIIEDP+ L
Sbjct: 406 GAIMAVGSSQPTLVGTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKIIEDPKDL 465
Query: 474 TL 475
T
Sbjct: 466 TF 467
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/83 (87%), Positives = 80/83 (96%)
Query: 45 KIREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVL 104
KIREIFMPALSSTMTEGKIVSW+A+EGDR+AKGD VVVVESDKADMDVETFHDG +AAVL
Sbjct: 48 KIREIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVL 107
Query: 105 VPAGESAPVGAPIALLAESEDDL 127
VPAGESAPVG+ IALLAESED++
Sbjct: 108 VPAGESAPVGSAIALLAESEDEI 130
>Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 541
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 211/443 (47%), Gaps = 34/443 (7%)
Query: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 119 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 178
Query: 107 AG-ESAPVGAPIALLAESEDDLQ-------AALAKAQELSKAHPQQXXXXXXXXXXXXXX 158
G + VG IA+ E E D++ + LA S+ Q
Sbjct: 179 DGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSK 238
Query: 159 XXXXXXXXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVE--AAAG 216
G + ++P A+KLA+ + V L+ V GTGP GRI AD+E A G
Sbjct: 239 ASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKG 298
Query: 217 IEXXXXXXXXXXXXXXXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAV 276
A P VP A + T + SK + +
Sbjct: 299 CRKEAL------------------AAP-GLSYTDVPNAQIRKVTANRLLSSKQTIPHYYL 339
Query: 277 PA-FRVGYPI-VTDKLDELYEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTY 334
RV I + +L+ L E K +++ + P N+S + Y
Sbjct: 340 TVDTRVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQY 399
Query: 335 NTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTL 394
+ N+NI VAV + GL PV+ DADK + +++++ K+L ++AR L+P++Y GTFT+
Sbjct: 400 H-NVNINVAVQTEHGLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTI 458
Query: 395 SNLGM-FGVDRFDAILPPGQGGIMAVGASKPTVV-ADKDGFFSVKSKMLVNVTADHRIVY 452
SNLG FG+ +F AI+ P Q I+A+G+++ V+ +G + S M ++ DHR++
Sbjct: 459 SNLGGPFGIKQFCAIINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVID 518
Query: 453 GADLAAFLQTFAKIIEDPESLTL 475
GA A FL+ F IE+P S+ L
Sbjct: 519 GAIGAEFLKAFKGYIENPTSMLL 541
>Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 550
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 213/445 (47%), Gaps = 37/445 (8%)
Query: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 127 QEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 186
Query: 107 AG-ESAPVGAPIALLAESEDDL-----QAALAKAQELSKAHPQ-QXXXXXXXXXXXXXXX 159
G + VG IA+ E E+D+ A + A+ + A + Q
Sbjct: 187 DGAKEIKVGEIIAVTVEEEEDIGKFKDYKAPSSAESAAPAESKPQSEPTEPKKEKEQPKA 246
Query: 160 XXXXXXXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEX 219
+ ++P A+KLA+ + V L+ + GTGP GRI AD+E
Sbjct: 247 PEPKATKTEESFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIE------- 299
Query: 220 XXXXXXXXXXXXXXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVES-LAVPA 278
GA + A P + G +P T ++ + ++ S +P
Sbjct: 300 ------------DYLASVAKGAKKETAAAPGL-GYVDLPNTQIRKVTANRLLHSKQTIPH 346
Query: 279 FRVGYPIVTDKLDELYEKVK-------SKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKS 331
+ + DKL +L ++ K +++ P N+S +
Sbjct: 347 YYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFI 406
Query: 332 FTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGT 391
Y+ N+NI VAV + GL PV+ DADK + ++ + K+L ++AR L+P +Y GT
Sbjct: 407 RQYH-NVNINVAVQTEDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGT 465
Query: 392 FTLSNLGM-FGVDRFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRI 450
FT+SNLG FG+ +F AI+ P Q I+A+G+++ V+ +G F V S M ++ DHR+
Sbjct: 466 FTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRV 525
Query: 451 VYGADLAAFLQTFAKIIEDPESLTL 475
+ GA A +++ F IE+P ++ L
Sbjct: 526 IDGAIGAEWMKAFKGYIENPTTMLL 550
>Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 548
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 211/449 (46%), Gaps = 43/449 (9%)
Query: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 123 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 182
Query: 107 AG-ESAPVGAPIALLAESEDDLQ---------AALAKAQELSKAHPQQXXXXXXXXXXXX 156
G + VG IA+ E E DL+ +A A KA P+
Sbjct: 183 DGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPE--PAEPKVKETEP 240
Query: 157 XXXXXXXXXXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAG 216
G + ++P A+KLA+ + V L+ V GTGP GRI AD+E
Sbjct: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIE---- 296
Query: 217 IEXXXXXXXXXXXXXXXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVES-LA 275
G +A P + T VP T ++ + ++ S
Sbjct: 297 ---------------DYLASVAKGGKREALAAPGL-SYTDVPNTQIRKVTANRLLSSKQT 340
Query: 276 VPAF------RVGYPI-VTDKLDELYEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRD 328
+P + RV I + +L+ L E K +++ + P N+S
Sbjct: 341 IPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMS 400
Query: 329 GKSFTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYS 388
Y+ N+NI VAV + GL PV+ DADK + ++++ K++ ++AR L+P +Y
Sbjct: 401 DFIRQYH-NVNINVAVQTEHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYE 459
Query: 389 SGTFTLSNLGM-FGVDRFDAILPPGQGGIMAVG-ASKPTVVADKDGFFSVKSKMLVNVTA 446
GTFT+SNLG FG+ +F AI+ P Q I+A+G A K + DG + S M ++
Sbjct: 460 GGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSC 519
Query: 447 DHRIVYGADLAAFLQTFAKIIEDPESLTL 475
DHR++ GA A FL+ F IE+P S+ L
Sbjct: 520 DHRVIDGAIGAEFLKAFKGYIENPNSMLL 548
>Os06g0499900 Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC
(Fragment)
Length = 484
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 202/436 (46%), Gaps = 24/436 (5%)
Query: 51 MPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAG-E 109
MPALS TM +G I W EG+++ GD + +E+DKA ++ E+ +G +A +L P G +
Sbjct: 62 MPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSK 121
Query: 110 SAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXXXXXXX 169
VG PIA+ E +D++ A A + Q
Sbjct: 122 DVQVGQPIAVTVEDLEDIKNIPADASFGGEQKEQSIASEAQKVETDAAKESSIITRI--- 178
Query: 170 XXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXX 229
+P AK L K+HR+D + + +GP G + DV AA +
Sbjct: 179 ----------SPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVLAALKLGASSSSTKQKNA 228
Query: 230 XXXXXXXXXIGAVPQAAELPPVPGATV-VPFTGMQAAVSKNMVES-LAVPAFRVGYPIVT 287
Q+ +P A +P + ++ ++K ++ES P + ++
Sbjct: 229 PAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLESKQTTPHLYLSQDVIL 288
Query: 288 DKLDELYEKVKSK-GVTMTVXXXXXXXXXXXQH--PVVNASCRDGKSFTYNT-NINIAVA 343
D L ++K + GV ++V P NA + K +++I++A
Sbjct: 289 DPLLAFRNELKEQHGVKVSVNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIA 348
Query: 344 VAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVD 403
VA + GL+TP++ +AD+ I +S + K+L +KARA +L PNE+ GTF++SNLGM+ VD
Sbjct: 349 VATEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVD 408
Query: 404 RFDAILPPGQGGIMAVGASKPTV--VADKDGF--FSVKSKMLVNVTADHRIVYGADLAAF 459
F AI+ P Q GI+AVG + V D DG +V +KM + ++ADHR+ G F
Sbjct: 409 HFCAIINPPQSGILAVGRGNKIIEPVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKF 468
Query: 460 LQTFAKIIEDPESLTL 475
++ D L L
Sbjct: 469 FTELSQNFGDIRRLLL 484
>AK108134
Length = 467
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 18/439 (4%)
Query: 46 IREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLV 105
++ + + +TE +++ W G RV D + V+SDKA +++ + DG++ +
Sbjct: 35 VKPFLLADIGEGITECQLIQWFVQPGARVEHFDKLCEVQSDKASVEITSPFDGVIKKLYY 94
Query: 106 PAGESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQ-QXXXXXXXXXXXXXXXXXXXX 164
+ A G P L + + D A A+A++L +A
Sbjct: 95 EPDDMAVTGRP---LVDIDMDGDEAEAEAEKLGEAETSADKGENTKVNTASHETESRPTE 151
Query: 165 XXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXX 224
+ATP + L K+ V++ V GTG GR+T DV +
Sbjct: 152 RRRNGNGKDDFSSLATPAVRHLMKELNVNITDVEGTGRDGRVTKEDVHRFVSQKTQQQME 211
Query: 225 XXXXXXXXXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYP 284
+ A + +P T +Q + K M +SL++P F
Sbjct: 212 VESPSTSPASTSASTSTLSTATQ------DQKLPLTPVQTQMFKVMTKSLSIPHFLYSCS 265
Query: 285 I----VTDKLDELYEKVKSKGVTMTVXXXXXXXXXXXQHPVVNAS--CRDGK--SFTYNT 336
VT +L S+ +T QHP++N++ D K S TY +
Sbjct: 266 ADMTSVTATRKKLNAMKTSEKLTHLPFIIKATSLALQQHPLLNSALDTSDPKKPSLTYRS 325
Query: 337 NINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSN 396
+ N VAV GL+ PV+ D L I ++Q+ K L +KAR +L P ++S +FT+SN
Sbjct: 326 SHNFGVAVDTPSGLLVPVIRDVQNLSIAQIAQQLKALSEKARNGKLAPGDFSGASFTISN 385
Query: 397 LGMFGVDRFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADL 456
+G G I+ Q I+ VG SK D++ + +++++ +ADHR+V GA+
Sbjct: 386 IGSVGGGVVAPIISEPQVAILGVGRSKVVPAFDENDQLVRREELVLSWSADHRVVDGAEC 445
Query: 457 AAFLQTFAKIIEDPESLTL 475
A + ++E+P ++ L
Sbjct: 446 ARCAEKVKGLLEEPTAMLL 464
>Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 440
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 243 PQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIV---------TDKLDEL 293
P +LPP VP ++ ++ + +S A + V +D DE
Sbjct: 200 PTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEF 259
Query: 294 YEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITP 353
K K M+ Q P+VNA DG Y ++I+VAV GL+ P
Sbjct: 260 VTKHGVKLGLMSCFVKAAVTALQNQ-PIVNAVI-DGDDIIYRDYVDISVAVGTSKGLVVP 317
Query: 354 VLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQ 413
V+ DAD ++ + + L KKA L +E + GTFT+SN G++G I+ P Q
Sbjct: 318 VIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQ 377
Query: 414 GGIMAVGA--SKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPE 471
I+ + + +P VV DG + M + +T DHR++ G + FL+ ++EDP
Sbjct: 378 SAILGMHSIVQRPVVV---DGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPR 434
Query: 472 SLTL 475
L L
Sbjct: 435 RLLL 438
>Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 386
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 12/235 (5%)
Query: 247 ELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGY---------PIVTDKLDELYEKV 297
+LPP VP ++ ++ + +S A + + +++D D+ EK
Sbjct: 124 QLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLITFNEVDMTNLMKLLSDYKDQFVEKH 183
Query: 298 KSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLED 357
K M+ Q P+VNA DG Y I+I+VAV GL+ V+ D
Sbjct: 184 GVKLGLMSCFVKAAVSALQNQ-PIVNAVI-DGDDIIYREYIDISVAVGTSKGLVVLVIHD 241
Query: 358 ADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIM 417
D ++ + + L KKA N + GTFT+SN G++G I+ Q I+
Sbjct: 242 IDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTISNGGVYGSLISTPIINSPQSSIL 301
Query: 418 AVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPES 472
+ + +V +G + M + + DHR++ G + FL+ ++EDP S
Sbjct: 302 GMHSIVQRLVV-VNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPRS 355
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,866,876
Number of extensions: 458960
Number of successful extensions: 1006
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 991
Number of HSP's successfully gapped: 16
Length of query: 475
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 370
Effective length of database: 11,553,331
Effective search space: 4274732470
Effective search space used: 4274732470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)