Os06g0105400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0105400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.27 | 0.217 | 8.97 | -1.56 | 0.507 | 1.93 | 1.19 | 1.54 | -0.369 | 17.8 | 1.244 | 721 | -- | -- |
| 21.58 | 0.216 | 8.95 | -1.53 | 0.454 | 1.87 | -0.0292 | -- | -0.35 | 17.6 | 1.393 | 718 | -- | -- |
| 21.5 | 0.216 | 8.96 | -1.55 | 0.299 | 1.68 | -- | 0.154 | -0.358 | 17.4 | 1.49 | 715 | -- | -- |
| 21.51 | 0.216 | 8.95 | -1.54 | 0.32 | 1.69 | -- | -- | -0.357 | 17.3 | 1.41 | 713 | -- | -- |
| 21.78 | 0.217 | 8.95 | -1.58 | -- | 1.34 | -- | 0.0598 | -0.382 | -- | 1.69 | 723 | -- | -- |
| 26.78 | 0.243 | 8.94 | -1.67 | 1.05 | -- | 0.206 | -- | -0.426 | 5.73 | -- | -- | -- | -- |
| 26.89 | 0.243 | 8.94 | -1.67 | 1.05 | -- | -- | -- | -0.427 | 5.73 | -- | -- | -- | -- |
| 21.78 | 0.217 | 8.95 | -1.57 | -- | 1.34 | -- | -- | -0.376 | -- | 1.49 | 723 | -- | -- |
| 75.86 | 0.406 | 8.97 | -- | 1.81 | 3.4 | -- | -- | -0.242 | 18 | 0.04192 | 737 | -- | -- |
| 84.4 | 0.429 | 8.96 | -1.63 | -- | -- | -- | -- | -0.402 | -- | -- | -- | -- | -- |
| 100.04 | 0.468 | 8.9 | -- | 1.03 | -- | -- | -- | -0.241 | 5.8 | -- | -- | -- | -- |
| 82.65 | 0.423 | 8.92 | -- | -- | 1.48 | -- | -- | -0.229 | -- | 0.004356 | 749 | -- | -- |
| 154.74 | 0.581 | 8.92 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 2 | 19.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 3 | 19.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 4 | 19.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 17 | 20.27 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 18 | 20.28 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 19 | 20.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 8 |
| 22 | 20.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 27 | 20.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 29 | 20.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 43 | 20.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 45 | 20.52 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 47 | 20.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 17 |
| 48 | 20.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 52 | 20.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 21 |
| 61 | 20.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 69 | 20.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 73 | 20.69 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 80 | 20.74 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 83 | 20.76 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 85 | 20.76 | radiation | 1.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 86 | 20.76 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 92 | 20.79 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 93 | 20.79 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 94 | 20.79 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 100 | 20.81 | temperature | 15.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 101 | 20.81 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 23 |
| 108 | 20.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 19 |
| 118 | 20.86 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 144 | 20.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 147 | 20.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 10 |
| 150 | 20.92 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 152 | 20.92 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 165 | 20.94 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 22 | 20 |
| 171 | 20.95 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 172 | 20.95 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 174 | 20.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 183 | 20.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 185 | 20.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 189 | 20.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 198 | 20.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 214 | 20.99 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 218 | 20.99 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 224 | 21.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 242 | 21.02 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 243 | 21.02 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 252 | 21.03 | temperature | 30.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 253 | 21.03 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 273 | 21.04 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 274 | 21.04 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 285 | 21.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 319 | 21.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 323 | 21.08 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 335 | 21.08 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 340 | 21.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 364 | 21.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 380 | 21.10 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 395 | 21.10 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 19 |
| 409 | 21.11 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 415 | 21.11 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 17 |
| 419 | 21.11 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 433 | 21.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 440 | 21.12 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 456 | 21.12 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 509 | 21.13 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 525 | 21.13 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 11 | 14 |
| 587 | 21.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 588 | 21.14 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 599 | 21.14 | temperature | 25.0 | 14400 | < th | dose dependent | no | NA | NA |
| 656 | 21.14 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 1 | 18 |
| 690 | 21.14 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 21 | 23 |
| 706 | 21.15 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 721 | 21.15 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 731 | 21.15 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 740 | 21.15 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 751 | 21.15 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 1 | 16 |
| 828 | 21.16 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 994 | 21.17 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 15 | 12 |