BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0105400 Os06g0105400|AK071985
(550 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferas... 1043 0.0
Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferas... 750 0.0
Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferas... 746 0.0
Os06g0499900 Similar to Dihydrolipoamide acetyltransferase ... 321 8e-88
Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase 172 9e-43
Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase 146 3e-35
Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 sub... 131 2e-30
AK108134 130 2e-30
Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferas... 122 6e-28
Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 sub... 104 1e-22
D10961 66 5e-11
>Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 550
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/550 (92%), Positives = 508/550 (92%)
Query: 1 MALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSD 60
MALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSD
Sbjct: 1 MALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSD 60
Query: 61 FSHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSG 120
FSHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSG
Sbjct: 61 FSHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSG 120
Query: 121 ADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 180
ADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL
Sbjct: 121 ADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 180
Query: 181 AKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYXXXXXXXXXXXXXXXXXXXXXXXXXX 240
AKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDY
Sbjct: 181 AKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYKAPSSAESAAPAESKPQSEPTEPKKE 240
Query: 241 XXXXXXXXXXXXXXXXSFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED 300
SFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED
Sbjct: 241 KEQPKAPEPKATKTEESFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED 300
Query: 301 YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK 360
YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK
Sbjct: 301 YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK 360
Query: 361 LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT 420
LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT
Sbjct: 361 LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT 420
Query: 421 EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF 480
EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF
Sbjct: 421 EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF 480
Query: 481 CAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKG 540
CAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKG
Sbjct: 481 CAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKG 540
Query: 541 YIENPTTMLL 550
YIENPTTMLL
Sbjct: 541 YIENPTTMLL 550
>Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 548
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/551 (70%), Positives = 426/551 (77%), Gaps = 8/551 (1%)
Query: 2 ALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSDF 61
A LLRHS KLR L +R +VR+FS+++ S K + K+IGG+ F
Sbjct: 4 AHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAG------VEKRIGGARF 57
Query: 62 SHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSGA 121
+Q GKEL+ FKVS + RA +P T G++ SCGQV +R FSS A
Sbjct: 58 PQCKQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVSSARSFSSSA 117
Query: 122 DLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 181
DLPPHQEIGMPSLSPTMTEGNIARW+KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA
Sbjct: 118 DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 177
Query: 182 KIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
KIIHGDGAKEIKVGEIIAVTVEEE D+ KFKDY
Sbjct: 178 KIIHGDGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPAEPKVKE 237
Query: 242 XXXXXXXXXXX-XXXXSFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED 300
+ R FSSP+ARKLAEDNNVPLSS+ GTGPDGRILKADIED
Sbjct: 238 TEPSRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIED 297
Query: 301 YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK 360
YLASVAKG K+E AAPGL Y D+PNTQIRKVTANRLL SKQTIPHYYLTVD RVD LIK
Sbjct: 298 YLASVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIK 357
Query: 361 LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT 420
LR ELNPLQ++SGGKKISINDLVIKAAALALR VP+CNSSWM+DFIRQYHNVNINVAVQT
Sbjct: 358 LRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQT 417
Query: 421 EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF 480
E GLFVPVIRDADKKGL TIA+EVKQ+AQRARDNSLKPEDYEGGTFT+SNLGGPFGIKQF
Sbjct: 418 EHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQF 477
Query: 481 CAIVNPPQSAILAIGSAEKRVIPGA-EGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFK 539
CAI+NPPQSAILAIG+AEKRVIPG+ +GQ+E GSFMSAT+SCDHRVIDGAIGAE++KAFK
Sbjct: 478 CAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFK 537
Query: 540 GYIENPTTMLL 550
GYIENP +MLL
Sbjct: 538 GYIENPNSMLL 548
>Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 541
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/551 (70%), Positives = 426/551 (77%), Gaps = 15/551 (2%)
Query: 2 ALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSDF 61
A LLRHS KLR H L CER +VR+FS+++ S K + K+IGG+ F
Sbjct: 4 AHLLRHSRKLRSLHNALDCERSGLVRYFSTASGSFPTKGNGAE---------KRIGGARF 54
Query: 62 SHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSGA 121
+Q GKEL+ K+S + + R+ +P T G++ SCGQ+ +R FSS A
Sbjct: 55 PQRKQPGKELETSKLS-LGLNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSA 113
Query: 122 DLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 181
DLPPHQEIGMPSLSPTMTEGNIARW+KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA
Sbjct: 114 DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 173
Query: 182 KIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
KIIHGDG+KEIKVGEIIAVTVEEE DI KFKDY
Sbjct: 174 KIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEE 233
Query: 242 XXXXXXXXXXXXXXXS-FLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED 300
S DR FSSP+ARKLAEDNNVPLSS+KGTGPDGRILKADIED
Sbjct: 234 REPSKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIED 293
Query: 301 YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK 360
YLA KG +KE AAPGL Y D+PN QIRKVTANRLL SKQTIPHYYLTVDTRVD LIK
Sbjct: 294 YLA---KGCRKEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIK 350
Query: 361 LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT 420
LR ELNPLQ++SGGKKISINDLVIKAAALALR VP+CNSSWMNDFIRQYHNVNINVAVQT
Sbjct: 351 LRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQT 410
Query: 421 EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF 480
E GLFVPVIRDADKKGL IA+EVKQLAQRARDNSLKP+DYEGGTFT+SNLGGPFGIKQF
Sbjct: 411 EHGLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQF 470
Query: 481 CAIVNPPQSAILAIGSAEKRVIPG-AEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFK 539
CAI+NPPQSAILAIGSAE+RVIPG A GQ+E GSFMSAT+SCDHRVIDGAIGAE++KAFK
Sbjct: 471 CAIINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFK 530
Query: 540 GYIENPTTMLL 550
GYIENPT+MLL
Sbjct: 531 GYIENPTSMLL 541
>Os06g0499900 Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC
(Fragment)
Length = 484
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 257/445 (57%), Gaps = 53/445 (11%)
Query: 119 SGADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEG 178
S PPH +GMP+LSPTM +GNIA+W K+EG+K+ G+V+CE+ETDKAT+E E +EEG
Sbjct: 50 SSTGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEG 109
Query: 179 YLAKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYXXXXXXXXXXXXXXXXXXXXXXXX 238
YLAKI+ +G+K+++VG+ IAVTVE+ EDI
Sbjct: 110 YLAKILAPEGSKDVQVGQPIAVTVEDLEDIKNIP---------------ADASFGGEQKE 154
Query: 239 XXXXXXXXXXXXXXXXXXSFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADI 298
S + T SP A+ L +++ + S + +GP G +LK D+
Sbjct: 155 QSIASEAQKVETDAAKESSII----TRISPAAKLLIKEHRLDQSVLNASGPRGTLLKGDV 210
Query: 299 EDYL---ASVAKGAKKETAAAPGL------------------GYVDLPNTQIRKVTANRL 337
L AS + +K AAP Y D+PN+QIRKV A RL
Sbjct: 211 LAALKLGASSSSTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRL 270
Query: 338 LHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLVIKAAALALRNVPEC 397
L SKQT PH YL+ D +D L+ R+EL G K+S+ND+VIKA ALALRNVPE
Sbjct: 271 LESKQTTPHLYLSQDVILDPLLAFRNELK----EQHGVKVSVNDIVIKAVALALRNVPEA 326
Query: 398 NSSWMND--FIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIADEVKQLAQRARDNS 455
N+ W ND ++ +V+I++AV TE GL P+IR+AD+K ++ I+ EVKQLA++AR
Sbjct: 327 NAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGK 386
Query: 456 LKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIP-----GAEGQFE 510
L P +++GGTF++SNLG + + FCAI+NPPQS ILA+G K + P G E +
Sbjct: 387 LAPNEFQGGTFSISNLGM-YPVDHFCAIINPPQSGILAVGRGNKIIEPVVDSDGTE-KAT 444
Query: 511 VGSFMSATLSCDHRVIDGAIGAEWM 535
V + MS TLS DHRV DG +G ++
Sbjct: 445 VVTKMSLTLSADHRVFDGQVGGKFF 469
>Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase
Length = 475
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 218/445 (48%), Gaps = 37/445 (8%)
Query: 127 QEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 186
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
Query: 187 DGAKEIKVGEIIAVTVEEEEDIGKFKDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 246
G + VG IA+ E E+ D
Sbjct: 107 AG-ESAPVGAPIALLAESED------DLQAALAKAQELSKAHPQQAPPPSDAAAPPPPPP 159
Query: 247 XXXXXXXXXXSFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDY----- 301
+ + ++P A+KLA+ + V L+ + GTGP GRI AD+E
Sbjct: 160 PPAAAPAAPAPVAAGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEP 219
Query: 302 --------------LASVAKGAKKETAAAPGL-GYVDLPNTQIRKVTANRLLHSKQTIPH 346
L++ A GA + A P + G +P T ++ + ++ S +P
Sbjct: 220 KPKVVPAASAAPVPLSAPAIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVES-LAVPA 278
Query: 347 YYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFI 406
+ + DKL +L ++ K +++ L+ KAAA+AL P N+S +
Sbjct: 279 FRVGYPIVTDKLDELYEKVK-------SKGVTMTVLLAKAAAMALAQHPVVNASCRDGKS 331
Query: 407 RQYH-NVNINVAVQTEDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGT 465
Y+ N+NI VAV + GL PV+ DADK + ++ + K+L ++AR L+P +Y GT
Sbjct: 332 FTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGT 391
Query: 466 FTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRV 525
FT+SNLG FG+ +F AI+ P Q I+A+G+++ V+ +G F V S M ++ DHR+
Sbjct: 392 FTLSNLGM-FGVDRFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRI 450
Query: 526 IDGAIGAEWMKAFKGYIENPTTMLL 550
+ GA A +++ F IE+P ++ L
Sbjct: 451 VYGADLAAFLQTFAKIIEDPESLTL 475
>Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase
Length = 467
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 10/284 (3%)
Query: 263 RTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAAPGLGYV 322
R +SP ARKLA+D NV L+SI G+GP GRI+ D+E A+ K A A
Sbjct: 188 RVVASPYARKLAKDLNVDLNSITGSGPGGRIVAKDVEAAAAAPKKAAPVAAARPDVPLGS 247
Query: 323 DLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDL 382
+P T ++ + ++ S +P + + D L L ++ P K ++++ L
Sbjct: 248 TVPFTTMQGAVSKNMVES-LAVPTFRVGYTFTTDALDALYKKIKP-------KGVTMSAL 299
Query: 383 VIKAAALALRNVPECNSSWMNDFIRQYHN-VNINVAVQTEDGLFVPVIRDADKKGLATIA 441
+ KA A+AL P NSS + Y++ +NI VAV + GL PV+ DADK + +++
Sbjct: 300 LAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLPDADKLDIYSLS 359
Query: 442 DEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRV 501
+ K+L +AR L+P +Y GTFT+SNL G FG+ +F AI+ P AI+A+GS++ +
Sbjct: 360 RKWKELVDKARAKQLQPHEYNSGTFTISNL-GMFGVDRFDAILPPGTGAIMAVGSSQPTL 418
Query: 502 IPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENP 545
+ +G + + M ++ DHRVI GA A +++ IE+P
Sbjct: 419 VGTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKIIEDP 462
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 116 CFSSGADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECM 175
CF A + +EI MP+LS TMTEG I W EGD+++ G+ + VE+DKA +++E
Sbjct: 42 CFRVEAKI---REIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETF 98
Query: 176 EEGYLAKIIHGDGAKEIKVGEIIAVTVEEEEDI 208
+G+LA ++ G + VG IA+ E E++I
Sbjct: 99 HDGFLAAVLVPAG-ESAPVGSAIALLAESEDEI 130
>Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 440
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 123/229 (53%), Gaps = 6/229 (2%)
Query: 324 LPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVD--KLIKLRSELNPLQDTSGGKKISIND 381
+P ++RK ANRL S+ T LT VD L+KLRS+ T G K+ +
Sbjct: 214 VPMPRLRKRIANRLKDSQNTF--AMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMS 271
Query: 382 LVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIA 441
+KAA AL+N P N+ D I V+I+VAV T GL VPVIRDAD A I
Sbjct: 272 CFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIE 331
Query: 442 DEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRV 501
+ LA++A + +L ++ GGTFT+SN GG +G I+NPPQSAIL + S +R
Sbjct: 332 KGINALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQSAILGMHSIVQRP 390
Query: 502 IPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL 550
+ +G M L+ DHR+IDG +++ K +E+P +LL
Sbjct: 391 V-VVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
>AK108134
Length = 467
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 40/314 (12%)
Query: 264 TFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAAPGLGYV- 322
+ ++P R L ++ NV ++ ++GTG DGR+ K D+ +++ + + + +
Sbjct: 164 SLATPAVRHLMKELNVNITDVEGTGRDGRVTKEDVHRFVSQKTQQQMEVESPSTSPASTS 223
Query: 323 -------------DLP----NTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSEL 365
LP TQ+ KV L +IPH+ + + + R +L
Sbjct: 224 ASTSTLSTATQDQKLPLTPVQTQMFKVMTKSL-----SIPHFLYSCSADMTSVTATRKKL 278
Query: 366 NPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMND-------FIRQYHNVNINVAV 418
N ++ + +K++ +IKA +LAL+ P NS+ R HN VAV
Sbjct: 279 NAMKTS---EKLTHLPFIIKATSLALQQHPLLNSALDTSDPKKPSLTYRSSHN--FGVAV 333
Query: 419 QTEDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIK 478
T GL VPVIRD +A IA ++K L+++AR+ L P D+ G +FT+SN+G G
Sbjct: 334 DTPSGLLVPVIRDVQNLSIAQIAQQLKALSEKARNGKLAPGDFSGASFTISNIGS-VGGG 392
Query: 479 QFCAIVNPPQSAILAIGSAEKRVIPGAE--GQFEVGSFMSATLSCDHRVIDGAIGAEWMK 536
I++ PQ AIL +G + +V+P + Q + + S DHRV+DGA A +
Sbjct: 393 VVAPIISEPQVAILGVGRS--KVVPAFDENDQLVRREELVLSWSADHRVVDGAECARCAE 450
Query: 537 AFKGYIENPTTMLL 550
KG +E PT MLL
Sbjct: 451 KVKGLLEEPTAMLL 464
>Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 501
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 320 GYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISI 379
G +P T ++ + ++ S ++P + + DKL L ++ K ++
Sbjct: 279 GATVVPFTTMQAAVSRNMMES-LSVPTFRVGYAVCTDKLDALCEKVK-------SKGVTK 330
Query: 380 NDLVIKAAALALRNVPECNSSWMNDFIRQYHN-VNINVAVQTEDGLFVPVIRDADKKGLA 438
L++KAAA+AL P N+S + Y++ +NI VAV E GL PV+ D DK +
Sbjct: 331 TLLLVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVY 390
Query: 439 TIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAE 498
+A + + L ++AR L+P++Y GTFT+SNLG FG+ +F AI+ P Q AI+A+G +
Sbjct: 391 LLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGM-FGVDRFDAILPPGQGAIMAVGGSR 449
Query: 499 KRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL 550
++ +G F + + M ++ DHR+I GA A +++ F IE+P ++ L
Sbjct: 450 PTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
>Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 386
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 324 LPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLV 383
+P ++RK ANRL S+ T + + L+KL S+ G K+ +
Sbjct: 134 VPMPRLRKRIANRLKDSQNTFAMLITFNEVDMTNLMKLLSDYKDQFVEKHGVKLGLMSCF 193
Query: 384 IKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIADE 443
+KAA AL+N P N+ D I ++I+VAV T GL V VI D D A I
Sbjct: 194 VKAAVSALQNQPIVNAVIDGDDIIYREYIDISVAVGTSKGLVVLVIHDIDAMNFADIEKG 253
Query: 444 VKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIP 503
+ LA++A + + + GGTFT+SN GG +G I+N PQS+IL + S +R++
Sbjct: 254 INNLAKKATEGAQSINNMAGGTFTISN-GGVYGSLISTPIINSPQSSILGMHSIVQRLVV 312
Query: 504 GAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENP 545
G M L DHR+IDG +++ K +E+P
Sbjct: 313 -VNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDP 353
>D10961
Length = 94
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 117 FSSGADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVET 165
+ S PPH +GMP+ SPTM +GNIA+W K+EG+K+ G+V+CE+ET
Sbjct: 46 WLSSTGFPPHLVVGMPAXSPTMNQGNIAKWRKQEGEKIEVGDVICEIET 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,965,351
Number of extensions: 746647
Number of successful extensions: 1784
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1758
Number of HSP's successfully gapped: 17
Length of query: 550
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 444
Effective length of database: 11,501,117
Effective search space: 5106495948
Effective search space used: 5106495948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)