Os02g0105200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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Os02g0105200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26 | 0.24 | 9.78 | -0.341 | 0.501 | -0.834 | -0.893 | -0.857 | 0.0516 | 4.03 | 16.19 | 352 | -- | -- |
| 26.3 | 0.239 | 9.76 | -0.198 | 0.48 | -0.757 | -0.719 | -- | 0.0917 | 4.16 | 19.37 | 341 | -- | -- |
| 27.8 | 0.246 | 9.75 | -0.198 | 0.498 | -0.728 | -- | 0.00324 | 0.0916 | 4.06 | 18.65 | 350 | -- | -- |
| 27.77 | 0.245 | 9.76 | -0.208 | 0.501 | -0.721 | -- | -- | 0.0883 | 4.1 | 19.18 | 356 | -- | -- |
| 35.92 | 0.279 | 9.72 | 0.0942 | -- | -1.14 | -- | 1.16 | 0.213 | -- | 21.44 | 274 | -- | -- |
| 35.7 | 0.28 | 9.78 | -0.385 | 0.758 | -- | -0.522 | -- | -0.0409 | 4.49 | -- | -- | -- | -- |
| 36.43 | 0.283 | 9.78 | -0.381 | 0.756 | -- | -- | -- | -0.0381 | 4.55 | -- | -- | -- | -- |
| 36.38 | 0.281 | 9.75 | -0.135 | -- | -1.07 | -- | -- | 0.145 | -- | 21.58 | 268 | -- | -- |
| 28.75 | 0.25 | 9.75 | -- | 0.476 | -0.85 | -- | -- | 0.129 | 4.08 | 17.63 | 350 | -- | -- |
| 66.9 | 0.382 | 9.79 | -0.351 | -- | -- | -- | -- | -0.0182 | -- | -- | -- | -- | -- |
| 40.24 | 0.297 | 9.77 | -- | 0.749 | -- | -- | -- | 0.0043 | 4.56 | -- | -- | -- | -- |
| 36.81 | 0.283 | 9.75 | -- | -- | -1.1 | -- | -- | 0.168 | -- | 21.39 | 268 | -- | -- |
| 70.16 | 0.391 | 9.78 | -- | -- | -- | -- | -- | 0.0208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 3 | 25.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 81 | 26.39 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 103 | 26.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 133 | 26.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 156 | 26.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 221 | 26.95 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 23 |
| 227 | 26.98 | temperature | 10 | 270 | > th | dose dependent | sin | 22 | NA |
| 241 | 27.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 14 |
| 268 | 27.10 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 22 |
| 276 | 27.12 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 17 |
| 329 | 27.22 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 14 |
| 339 | 27.24 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 411 | 27.34 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 16 |
| 489 | 27.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 545 | 27.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 566 | 27.57 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 614 | 27.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 623 | 27.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 679 | 27.70 | temperature | 30 | 270 | > th | dose independent | sin | 21 | NA |
| 701 | 27.72 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 23 |
| 744 | 27.76 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 9 |
| 763 | 27.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 8 |
| 800 | 27.79 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 801 | 27.79 | temperature | 30 | 270 | < th | dose independent | sin | 22 | NA |
| 841 | 27.79 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 851 | 27.79 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 19 |
| 909 | 27.80 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 16 |
| 940 | 27.82 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 950 | 27.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 990 | 27.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 18 |