BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0105200 Os02g0105200|AK063525
(548 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferas... 1048 0.0
Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferas... 924 0.0
Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferas... 778 0.0
Os06g0499900 Similar to Dihydrolipoamide acetyltransferase ... 320 1e-87
Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase 189 6e-48
Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase 171 2e-42
AK108134 143 3e-34
Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 sub... 135 1e-31
Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferas... 123 4e-28
Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 sub... 108 1e-23
>Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 548
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/548 (93%), Positives = 514/548 (93%)
Query: 1 MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC 60
MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC
Sbjct: 1 MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC 60
Query: 61 KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVXXXXXXXXXXDLP 120
KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQV DLP
Sbjct: 61 KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVSSARSFSSSADLP 120
Query: 121 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 180
PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII
Sbjct: 121 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 180
Query: 181 HGDGAKEIKVGEIIAVTVEEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKETEP 240
HGDGAKEIKVGEIIAVTVEEEGDLEKFKDY VKETEP
Sbjct: 181 HGDGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPAEPKVKETEP 240
Query: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA 300
SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA
Sbjct: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA 300
Query: 301 SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG 360
SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG
Sbjct: 301 SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG 360
Query: 361 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG 420
ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG
Sbjct: 361 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG 420
Query: 421 LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI 480
LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI
Sbjct: 421 LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI 480
Query: 481 INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 540
INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI
Sbjct: 481 INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 540
Query: 541 ENPNSMLL 548
ENPNSMLL
Sbjct: 541 ENPNSMLL 548
>Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 541
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/548 (83%), Positives = 480/548 (87%), Gaps = 7/548 (1%)
Query: 1 MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC 60
MSAAHLLRHSRKLR+L +ALD +RS LVRYFS AS SFPTKG G EKRIGGARFPQ
Sbjct: 1 MSAAHLLRHSRKLRSLHNALDCERSGLVRYFSTASGSFPTKGN---GAEKRIGGARFPQR 57
Query: 61 KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVXXXXXXXXXXDLP 120
KQPGKELET K+SLG LNG Y CRR+PNN IP TITGLNGSLSCGQ+ DLP
Sbjct: 58 KQPGKELETSKLSLG-LNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLP 116
Query: 121 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 180
PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII
Sbjct: 117 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 176
Query: 181 HGDGAKEIKVGEIIAVTVEEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKETEP 240
HGDG+KEIKVGEIIAVTVEEEGD++KFKDY V+E EP
Sbjct: 177 HGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREP 236
Query: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA 300
S+ E KAP+TEE S+ G RIFSSPLARKLAEDNNVPLSSV GTGPDGRILKADIEDYLA
Sbjct: 237 SKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLA 296
Query: 301 SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG 360
KG ++EALAAPGLSYTDVPN QIRKVTANRLLSSKQTIPHYYLTVD RVDNLIKLRG
Sbjct: 297 ---KGCRKEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRG 353
Query: 361 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG 420
ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWM+DFIRQYHNVNINVAVQTEHG
Sbjct: 354 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHG 413
Query: 421 LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI 480
LFVPVIRDADKKGLG IAEEVKQ+AQRARDNSLKP+DYEGGTFTISNLGGPFGIKQFCAI
Sbjct: 414 LFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAI 473
Query: 481 INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 540
INPPQSAILAIG+AE+RVIPGS +GQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI
Sbjct: 474 INPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 533
Query: 541 ENPNSMLL 548
ENP SMLL
Sbjct: 534 ENPTSMLL 541
>Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 550
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/551 (71%), Positives = 433/551 (78%), Gaps = 8/551 (1%)
Query: 4 AHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVE------KRIGGARF 57
A LLRHS KLR L +R +VR+FS+++ S K + K+IGG+ F
Sbjct: 2 ALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSDF 61
Query: 58 PQCKQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVXXXXXXXXXX 117
+Q GKEL+ FKVS + RA +P T G++ SCGQV
Sbjct: 62 SHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSGA 121
Query: 118 DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 177
DLPPHQEIGMPSLSPTMTEGNIARW+KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA
Sbjct: 122 DLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 181
Query: 178 KIIHGDGAKEIKVGEIIAVTVEEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKE 237
KIIHGDGAKEIKVGEIIAVTVEEE D+ KFKDY KE
Sbjct: 182 KIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYKAPSSAESAAPAESKPQSEPTEPK-KE 240
Query: 238 TEPSRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIED 297
E + PEPKA KTEE+ R FSSP+ARKLAEDNNVPLSS+ GTGPDGRILKADIED
Sbjct: 241 KEQPKAPEPKATKTEESFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIED 300
Query: 298 YLASVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIK 357
YLASVAKG K+E AAPGL Y D+PNTQIRKVTANRLL SKQTIPHYYLTVD RVD LIK
Sbjct: 301 YLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIK 360
Query: 358 LRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQT 417
LR ELNPLQ++SGGKKISINDLVIKAAALALR VP+CNSSWM+DFIRQYHNVNINVAVQT
Sbjct: 361 LRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQT 420
Query: 418 EHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQF 477
E GLFVPVIRDADKKGL TIA+EVKQ+AQRARDNSLKPEDYEGGTFT+SNLGGPFGIKQF
Sbjct: 421 EDGLFVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQF 480
Query: 478 CAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFK 537
CAI+NPPQSAILAIG+AEKRVIPG+ +GQ+E GSFMSAT+SCDHRVIDGAIGAE++KAFK
Sbjct: 481 CAIVNPPQSAILAIGSAEKRVIPGA-EGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFK 539
Query: 538 GYIENPNSMLL 548
GYIENP +MLL
Sbjct: 540 GYIENPTTMLL 550
>Os06g0499900 Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC
(Fragment)
Length = 484
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 266/456 (58%), Gaps = 51/456 (11%)
Query: 119 LPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAK 178
PPH +GMP+LSPTM +GNIA+W K+EG+K+ G+V+CE+ETDKAT+E E +EEGYLAK
Sbjct: 54 FPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAK 113
Query: 179 IIHGDGAKEIKVGEIIAVTVEEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKET 238
I+ +G+K+++VG+ IAVTVE DLE K+ ++
Sbjct: 114 ILAPEGSKDVQVGQPIAVTVE---DLEDIKNIPADASFGG-----------------EQK 153
Query: 239 EPSRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDY 298
E S E + +T+ A + SP A+ L +++ + S + +GP G +LK D+
Sbjct: 154 EQSIASEAQKVETDAAKESSIITRISPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVLAA 213
Query: 299 L---ASVAKGGKREALAAPGL------------------SYTDVPNTQIRKVTANRLLSS 337
L AS + ++ A AAP +Y D+PN+QIRKV A RLL S
Sbjct: 214 LKLGASSSSTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLES 273
Query: 338 KQTIPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSS 397
KQT PH YL+ D +D L+ R EL + G K+S+ND+VIKA ALALR VP+ N+
Sbjct: 274 KQTTPHLYLSQDVILDPLLAFRNEL----KEQHGVKVSVNDIVIKAVALALRNVPEANAY 329
Query: 398 WMSD--FIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKP 455
W +D ++ +V+I++AV TE GL P+IR+AD+K + I+ EVKQ+A++AR L P
Sbjct: 330 WNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGKLAP 389
Query: 456 EDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSF--- 512
+++GGTF+ISNLG + + FCAIINPPQS ILA+G K + P E +
Sbjct: 390 NEFQGGTFSISNLGM-YPVDHFCAIINPPQSGILAVGRGNKIIEPVVDSDGTEKATVVTK 448
Query: 513 MSATMSCDHRVIDGAIGAEFLKAFKGYIENPNSMLL 548
MS T+S DHRV DG +G +F + +LL
Sbjct: 449 MSLTLSADHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
>Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase
Length = 467
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 218/427 (51%), Gaps = 14/427 (3%)
Query: 123 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 182
+EI MP+LS TMTEG I W EGD+++ G+ + VE+DKA +++E +G+LA ++
Sbjct: 50 REIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVP 109
Query: 183 DGAKEIKVGEIIAVTVEEEGDL--EKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKETEP 240
G + VG IA+ E E ++ + K P
Sbjct: 110 AG-ESAPVGSAIALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPPPPPPPPAP 168
Query: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA 300
ASQ G R+ +SP ARKLA+D NV L+S+ G+GP GRI+ D+E A
Sbjct: 169 VAAAVSAPAPPSPASQGGLRVVASPYARKLAKDLNVDLNSITGSGPGGRIVAKDVEAAAA 228
Query: 301 SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG 360
+ K A + VP T ++ + ++ S +P + + D L L
Sbjct: 229 APKKAAPVAAARPDVPLGSTVPFTTMQGAVSKNMVES-LAVPTFRVGYTFTTDALDALYK 287
Query: 361 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHN-VNINVAVQTEH 419
++ P K ++++ L+ KA A+AL + P NSS Y++ +NI VAV +
Sbjct: 288 KIKP-------KGVTMSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDG 340
Query: 420 GLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCA 479
GL PV+ DADK + +++ + K++ +AR L+P +Y GTFTISNL G FG+ +F A
Sbjct: 341 GLITPVLPDADKLDIYSLSRKWKELVDKARAKQLQPHEYNSGTFTISNL-GMFGVDRFDA 399
Query: 480 IINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGY 539
I+ P AI+A+G+++ ++ G+ DG + M ++ DHRVI GA A FL+
Sbjct: 400 ILPPGTGAIMAVGSSQPTLV-GTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKI 458
Query: 540 IENPNSM 546
IE+P +
Sbjct: 459 IEDPKDL 465
>Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase
Length = 475
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 222/447 (49%), Gaps = 39/447 (8%)
Query: 123 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 182
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
Query: 183 DGAKEIKVGEIIAVTVEEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKETEPSR 242
G + VG IA+ E E DL+ P
Sbjct: 107 AG-ESAPVGAPIALLAESEDDLQ-------AALAKAQELSKAHPQQAPPPSDAAAPPPPP 158
Query: 243 TPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDY---- 298
P AP G + ++P A+KLA+ + V L+ V GTGP GRI AD+E
Sbjct: 159 PPPAAAPAAPAPVAAGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIE 218
Query: 299 ---------------LASVAKGGKREALAAPGL-SYTDVPNTQIRKVTANRLLSSKQTIP 342
L++ A G +A P + T VP T ++ + ++ S +P
Sbjct: 219 PKPKVVPAASAAPVPLSAPAIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVES-LAVP 277
Query: 343 HYYLTVDARVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDF 402
+ RV I + +L+ L E K +++ L+ KAAA+AL + P N+S
Sbjct: 278 AF------RVGYPI-VTDKLDELYEKVKSKGVTMTVLLAKAAAMALAQHPVVNASCRDGK 330
Query: 403 IRQYH-NVNINVAVQTEHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGG 461
Y+ N+NI VAV + GL PV+ DADK + ++++ K++ ++AR L+P +Y G
Sbjct: 331 SFTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSG 390
Query: 462 TFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDH 521
TFT+SNLG FG+ +F AI+ P Q I+A+G ++ V+ DG + S M ++ DH
Sbjct: 391 TFTLSNLGM-FGVDRFDAILPPGQGGIMAVGASKPTVV-ADKDGFFSVKSKMLVNVTADH 448
Query: 522 RVIDGAIGAEFLKAFKGYIENPNSMLL 548
R++ GA A FL+ F IE+P S+ L
Sbjct: 449 RIVYGADLAAFLQTFAKIIEDPESLTL 475
>AK108134
Length = 467
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 205/448 (45%), Gaps = 63/448 (14%)
Query: 134 MTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEI 193
+TE + +W + G +V + LCEV++DKA+VE+ +G + K+ + + +
Sbjct: 47 ITECQLIQWFVQPGARVEHFDKLCEVQSDKASVEITSPFDGVIKKLYYEPDDMAVTGRPL 106
Query: 194 IAVTV---EEEGDLEKFKDYXXXXXXXXXXXXXXXXXXXXXXXXVKETEPSRTPEPKAPK 250
+ + + E E + EK + ETE SR P
Sbjct: 107 VDIDMDGDEAEAEAEKLGEAETSADKGENTKVNTAS---------HETE-SR------PT 150
Query: 251 TEEASQPGGRIFSS---PLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLASVAK--- 304
+ G FSS P R L ++ NV ++ V GTG DGR+ K D+ +++ +
Sbjct: 151 ERRRNGNGKDDFSSLATPAVRHLMKELNVNITDVEGTGRDGRVTKEDVHRFVSQKTQQQM 210
Query: 305 ----------------GGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTV 348
A L T V TQ+ KV L +IPH+ +
Sbjct: 211 EVESPSTSPASTSASTSTLSTATQDQKLPLTPV-QTQMFKVMTKSL-----SIPHFLYSC 264
Query: 349 DARVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSW-MSD------ 401
A + ++ R +LN ++ S +K++ +IKA +LAL++ P NS+ SD
Sbjct: 265 SADMTSVTATRKKLNAMKTS---EKLTHLPFIIKATSLALQQHPLLNSALDTSDPKKPSL 321
Query: 402 FIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGG 461
R HN VAV T GL VPVIRD + IA+++K ++++AR+ L P D+ G
Sbjct: 322 TYRSSHN--FGVAVDTPSGLLVPVIRDVQNLSIAQIAQQLKALSEKARNGKLAPGDFSGA 379
Query: 462 TFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIPG-SVDGQYEFGSFMSATMSCD 520
+FTISN+G G II+ PQ AIL +G + +V+P + Q + + S D
Sbjct: 380 SFTISNIGS-VGGGVVAPIISEPQVAILGVGRS--KVVPAFDENDQLVRREELVLSWSAD 436
Query: 521 HRVIDGAIGAEFLKAFKGYIENPNSMLL 548
HRV+DGA A + KG +E P +MLL
Sbjct: 437 HRVVDGAECARCAEKVKGLLEEPTAMLL 464
>Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 440
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 121/228 (53%), Gaps = 3/228 (1%)
Query: 321 VPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISINDLV 380
VP ++RK ANRL S+ T + + NL+KLR + + G K+ +
Sbjct: 214 VPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCF 273
Query: 381 IKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGTIAEE 440
+KAA AL+ P N+ D I V+I+VAV T GL VPVIRDAD I +
Sbjct: 274 VKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKG 333
Query: 441 VKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIP 500
+ +A++A + +L ++ GGTFTISN GG +G IINPPQSAIL + + +R P
Sbjct: 334 INALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQSAILGMHSIVQR--P 390
Query: 501 GSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPNSMLL 548
VDG M ++ DHR+IDG FL+ K +E+P +LL
Sbjct: 391 VVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
>Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 501
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 11/231 (4%)
Query: 319 TDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISIND 378
T VP T ++ + ++ S ++P + + D +L+ L E K ++
Sbjct: 281 TVVPFTTMQAAVSRNMMES-LSVPTFRVGYAVCTD-------KLDALCEKVKSKGVTKTL 332
Query: 379 LVIKAAALALRKVPQCNSSWMSDFIRQYHN-VNINVAVQTEHGLFVPVIRDADKKGLGTI 437
L++KAAA+AL + P N+S Y++ +NI VAV E GL PV+ D DK + +
Sbjct: 333 LLVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLL 392
Query: 438 AEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKR 497
A++ + + ++AR L+P++Y GTFT+SNLG FG+ +F AI+ P Q AI+A+G +
Sbjct: 393 AQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGM-FGVDRFDAILPPGQGAIMAVGGSRPT 451
Query: 498 VIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPNSMLL 548
++ + DG + + M ++ DHR+I GA A FL+ F IE+P S+ L
Sbjct: 452 LV-ANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
>Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 386
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 321 VPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISINDLV 380
VP ++RK ANRL S+ T + + NL+KL + G K+ +
Sbjct: 134 VPMPRLRKRIANRLKDSQNTFAMLITFNEVDMTNLMKLLSDYKDQFVEKHGVKLGLMSCF 193
Query: 381 IKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGTIAEE 440
+KAA AL+ P N+ D I ++I+VAV T GL V VI D D I +
Sbjct: 194 VKAAVSALQNQPIVNAVIDGDDIIYREYIDISVAVGTSKGLVVLVIHDIDAMNFADIEKG 253
Query: 441 VKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGTAEKRVIP 500
+ +A++A + + + GGTFTISN GG +G IIN PQS+IL + + +R++
Sbjct: 254 INNLAKKATEGAQSINNMAGGTFTISN-GGVYGSLISTPIINSPQSSILGMHSIVQRLV- 311
Query: 501 GSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPNS 545
V+G M + DHR+IDG FL+ K +E+P S
Sbjct: 312 -VVNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPRS 355
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,670,820
Number of extensions: 794193
Number of successful extensions: 1590
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 13
Length of query: 548
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 442
Effective length of database: 11,501,117
Effective search space: 5083493714
Effective search space used: 5083493714
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)