Os06g0499900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC (Fragment).
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Os06g0499900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.97 | 0.21 | 9.25 | -0.51 | 0.0992 | 0.11 | -0.0615 | -1.84 | 0.147 | 10.4 | 5 | 2688 | -- | -- |
| 20.67 | 0.212 | 9.28 | -0.452 | 0.112 | 0.478 | -0.0419 | -- | 0.125 | 10.7 | 4.771 | 2543 | -- | -- |
| 19.98 | 0.208 | 9.25 | -0.514 | 0.0968 | 0.0974 | -- | -1.89 | 0.148 | 10.5 | 5.046 | 2711 | -- | -- |
| 20.66 | 0.212 | 9.28 | -0.458 | 0.109 | 0.471 | -- | -- | 0.128 | 10.6 | 4.685 | 2602 | -- | -- |
| 20.54 | 0.211 | 9.25 | -0.527 | -- | 0.048 | -- | -1.96 | 0.15 | -- | 5.294 | 2753 | -- | -- |
| 23.48 | 0.227 | 9.29 | -0.582 | 0.0821 | -- | 0.0127 | -- | 0.0897 | 10.2 | -- | -- | -- | -- |
| 23.48 | 0.227 | 9.29 | -0.581 | 0.0822 | -- | -- | -- | 0.0897 | 10.1 | -- | -- | -- | -- |
| 21.3 | 0.215 | 9.29 | -0.466 | -- | 0.436 | -- | -- | 0.127 | -- | 4.804 | 2761 | -- | -- |
| 25.33 | 0.234 | 9.3 | -- | 0.0902 | 0.556 | -- | -- | 0.0514 | 10.4 | 4.238 | 5806 | -- | -- |
| 23.89 | 0.228 | 9.3 | -0.583 | -- | -- | -- | -- | 0.0896 | -- | -- | -- | -- | -- |
| 32.4 | 0.266 | 9.28 | -- | 0.0854 | -- | -- | -- | 0.154 | 10.6 | -- | -- | -- | -- |
| 25.78 | 0.236 | 9.3 | -- | -- | 0.545 | -- | -- | 0.0491 | -- | 5 | 5808 | -- | -- |
| 32.84 | 0.267 | 9.28 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.28 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 2 | 19.28 | radiation | 10 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 3 | 19.33 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 5 | 19.38 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 25 | 19.67 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 29 | 19.70 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 47 | 19.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 51 | 19.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 57 | 19.89 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 68 | 19.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 74 | 19.93 | temperature | 15 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 82 | 19.96 | humidity | 80 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 85 | 19.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 87 | 19.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 88 | 19.99 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 89 | 20.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 98 | 20.03 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 101 | 20.04 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 104 | 20.05 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 112 | 20.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 114 | 20.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 119 | 20.09 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 128 | 20.11 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 139 | 20.14 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 13 |
| 140 | 20.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 147 | 20.16 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 157 | 20.17 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 15 |
| 162 | 20.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 172 | 20.19 | temperature | 15 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 180 | 20.20 | temperature | 15 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 190 | 20.21 | humidity | 70 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 200 | 20.21 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 214 | 20.23 | temperature | 15 | 14400 | < th | dose independent | sin | 3 | NA |
| 216 | 20.23 | humidity | 90 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 223 | 20.23 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 230 | 20.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 233 | 20.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 245 | 20.25 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 246 | 20.25 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 261 | 20.25 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 267 | 20.26 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 307 | 20.27 | temperature | 15 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 323 | 20.28 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 325 | 20.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 344 | 20.28 | radiation | 10 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 345 | 20.28 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 355 | 20.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 372 | 20.29 | humidity | 50 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 377 | 20.29 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 414 | 20.31 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 422 | 20.31 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 445 | 20.31 | temperature | 20 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 451 | 20.32 | temperature | 15 | 14400 | > th | dose independent | sin | 1 | NA |
| 478 | 20.32 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 532 | 20.34 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 561 | 20.34 | temperature | 20 | 30 | > th | dose independent | rect. | 1 | 22 |
| 583 | 20.35 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 614 | 20.36 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 680 | 20.37 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 11 |
| 699 | 20.37 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 711 | 20.38 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 761 | 20.39 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 836 | 20.40 | humidity | 90 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 866 | 20.40 | temperature | 15 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 868 | 20.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 890 | 20.41 | temperature | 15 | 14400 | < th | dose independent | no | NA | NA |
| 891 | 20.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 914 | 20.41 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 932 | 20.41 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 977 | 20.42 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 22 |