BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0499900 Os06g0499900|AK072554
(484 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714 555 e-158
AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540 333 1e-91
AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540 327 1e-89
AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466 145 4e-35
AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465 123 2e-28
AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465 123 2e-28
AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484 121 8e-28
AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481 119 4e-27
>AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714
Length = 713
Score = 555 bits (1430), Expect = e-158, Method: Compositional matrix adjust.
Identities = 282/434 (64%), Positives = 331/434 (76%), Gaps = 2/434 (0%)
Query: 51 STGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGY 110
++ PPH+V+ MPALSPTMNQGNIAKW K+EG+KIEVGDVI EIETDKATLEFESLEEGY
Sbjct: 282 ASDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGY 341
Query: 111 LAKILAPEGSKDVQVGQPIAVTVEDLEDIKNIPADASFGGEQKEQSIASEAQKVETDAAK 170
LAKIL PEGSKDV VG+PIA+ VED E I+ I +S G + ++ V +
Sbjct: 342 LAKILIPEGSKDVAVGKPIALIVEDAESIEAI--KSSSAGSSEVDTVKEVPDSVVDKPTE 399
Query: 171 ESSIITRISPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVXXXXXXXXXXXXTKQKNAPA 230
+ T+ISPAAKLLI EH L+ S + ASGP GTLLK DV +
Sbjct: 400 RKAGFTKISPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAAIASGKASKSSASTKKKQ 459
Query: 231 APSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDP 290
P+ ++ Q ++ YED PNSQIRK+IAKRLLESKQ PHLYL DV+LDP
Sbjct: 460 PSKETPSKSSSTSKPSVTQSDNNYEDFPNSQIRKIIAKRLLESKQKIPHLYLQSDVVLDP 519
Query: 291 LLAFRNELKEQHGVKVSVNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVA 350
LLAFR EL+E HGVKVSVNDIVIKAVA+ALRNV +ANA+W+ +K C SVDISIAVA
Sbjct: 520 LLAFRKELQENHGVKVSVNDIVIKAVAVALRNVRQANAFWDAEKGDIVMCDSVDISIAVA 579
Query: 351 TEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHF 410
TEKGLMTPII+NADQK+ISAIS EVK+LA+KAR+GKLAP+EFQGGTFSISNLGMYPVD+F
Sbjct: 580 TEKGLMTPIIKNADQKSISAISLEVKELAQKARSGKLAPHEFQGGTFSISNLGMYPVDNF 639
Query: 411 CAIINPPQSGILAVGRGNKIIEPVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKFFT 470
CAIINPPQ+GILAVGRGNK++EPV+ DG EK +VVTKM++TLSADHR+FDGQVG F +
Sbjct: 640 CAIINPPQAGILAVGRGNKVVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASFMS 699
Query: 471 ELSQNFGDIRRLLL 484
EL NF D+RRLLL
Sbjct: 700 ELRSNFEDVRRLLL 713
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 103/150 (68%), Gaps = 5/150 (3%)
Query: 30 PSYLASLGRH----YKV-PMEIRWLSSTGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEK 84
PSYL R YK+ P+ +L G V+ MPALSPTM+ GN+ KW K+EG+K
Sbjct: 129 PSYLRYSDRRCNQLYKILPLNYYFLWVVGPISQTVLAMPALSPTMSHGNVVKWMKKEGDK 188
Query: 85 IEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIAVTVEDLEDIKNIPA 144
+EVGDV+CEIETDKAT+EFES EEG+LAKIL EGSKD+ V +PIA+ VE+ +DIKN+PA
Sbjct: 189 VEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSKDIPVNEPIAIMVEEEDDIKNVPA 248
Query: 145 DASFGGEQKEQSIASEAQKVETDAAKESSI 174
G + KE++ A + K + ++SSI
Sbjct: 249 TIEGGRDGKEETSAHQVMKPDESTQQKSSI 278
>AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540
Length = 539
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/473 (41%), Positives = 286/473 (60%), Gaps = 45/473 (9%)
Query: 36 LGRHYKVPME-IRWLSS-TGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICE 93
G+ + M+ R SS + PPH +GMP+LSPTM +GNIA+W K+EG+K+ G+V+CE
Sbjct: 88 FGKEFSCLMQSARGFSSGSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCE 147
Query: 94 IETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIAVTVEDLEDIKNI-------PADA 146
+ETDKAT+E E +EEGYLAKI+ EGSK++QVG+ IA+TVED EDI ADA
Sbjct: 148 VETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADA 207
Query: 147 SFGGEQ------KEQSIASEAQKVETDAAKESSIIT--RI--SPAAKLLIKEHRLDQSVL 196
+ + KE+ + + E A+K S+ T R+ SP A+ L +++ + S +
Sbjct: 208 APTKAEPTPAPPKEEKVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDI 267
Query: 197 NASGPRGTLLKGDVXXXXXXXXXXXXTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYED 256
+GP G ++K D+ + K A A PS + D +A ++ Y D
Sbjct: 268 EGTGPEGRIVKADI-------DEYLASSGKGATAKPSK--STDSKAPALD-------YVD 311
Query: 257 IPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFR---NELKEQHGVK-VSVNDIV 312
IP+SQIRKV A RL SKQT PH YL+ D +D L+A R N KE G K +SVND+V
Sbjct: 312 IPHSQIRKVTASRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLV 371
Query: 313 IKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAIS 372
+KA ALALR VP+ N+ W +D + K +V+I++AV TE GL P++++AD+K +S I
Sbjct: 372 VKAAALALRKVPQCNSSWTDDYIRQFK--NVNINVAVQTENGLYVPVVKDADRKGLSTIG 429
Query: 373 SEVKQLAEKARAGKLAPNEFQGGTFSISNL-GMYPVDHFCAIINPPQSGILAVGRGNKII 431
EV+ LA+KA+ L P +++GGTF++SNL G + + FCA++NPPQ+ ILAVG K +
Sbjct: 430 EEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRV 489
Query: 432 EPVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
P +G ++ + M +TLS DHRV DG +G ++ + + +LL
Sbjct: 490 VP---GNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540
Length = 539
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 269/442 (60%), Gaps = 43/442 (9%)
Query: 50 SSTGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEG 109
SS+ PPH +GMP+LSPTM +GNIA+W K+EG+K+ G+V+CE+ETDKAT+E E +EEG
Sbjct: 104 SSSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEG 163
Query: 110 YLAKILAPEGSKDVQVGQPIAVTVEDLEDI---KNIPADASFGGEQ----------KEQS 156
+LAKI+ EG+K++QVG+ IA+TVED +DI K+ + G KE+
Sbjct: 164 FLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEEK 223
Query: 157 IASEAQKVETDAAKESSIIT--RI--SPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVXX 212
+ A E +K SS + RI SP A+ L +++ + S + +GP G ++K DV
Sbjct: 224 VEKPASAPEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKADV-- 281
Query: 213 XXXXXXXXXXTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLE 272
+ K A PS Q A Y DIP++QIRKV A RL
Sbjct: 282 -----EDFLASGSKETTAKPSKQVDSKVPALD---------YVDIPHTQIRKVTASRLAF 327
Query: 273 SKQTTPHLYLSQDVILDPLLAFRNEL----KEQHGVKVSVNDIVIKAVALALRNVPEANA 328
SKQT PH YL+ D +D ++ R++L + G ++SVND+VIKA ALALR VP+ N+
Sbjct: 328 SKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDLVIKAAALALRKVPQCNS 387
Query: 329 YWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGKLA 388
W + E ++ +V+I++AV TE GL P++++AD+K +S I EV+ LA+KA+ L
Sbjct: 388 SWTD--EYIRQFKNVNINVAVQTENGLYVPVVKDADKKGLSTIGEEVRFLAQKAKENSLK 445
Query: 389 PNEFQGGTFSISNLGM-YPVDHFCAIINPPQSGILAVGRGNKIIEPVVDSDGTEKATVVT 447
P +++GGTF++SNLG + + FCA+INPPQ+ ILA+G K + P G ++ V +
Sbjct: 446 PEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVP---GTGPDQYNVAS 502
Query: 448 KMSLTLSADHRVFDGQVGGKFF 469
MS+TLS DHRV DG +G ++
Sbjct: 503 YMSVTLSCDHRVIDGAIGAEWL 524
>AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466
Length = 465
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 211/449 (46%), Gaps = 53/449 (11%)
Query: 62 MPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSK 121
MPALS TM +G I W K EG+K+ G+ + +E+DKA ++ E+ +GYLA I+ EG
Sbjct: 44 MPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEEGGV 103
Query: 122 DVQVGQPIAVTVEDLEDIKNIP-----------------------ADASFGGEQKEQSIA 158
VG IA+ E ++I + +A E+K +
Sbjct: 104 -APVGSAIALLAETEDEIADAKAKASGGGGGGDSKAPPASPPTAAVEAPVSVEKKVAAAP 162
Query: 159 SEAQKVETDA---AKESSIITRISPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVXXXXX 215
+ V A A E SP AK L KE +++ + L SGP G ++ DV
Sbjct: 163 VSIKAVAASAVHPASEGGKRIVASPYAKKLAKELKVELAGLVGSGPMGRIVAKDVEAVAA 222
Query: 216 XXXXXXXTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLESKQ 275
K AAP + SV +P + ++ +++ ++ES
Sbjct: 223 GGGVQAAVAVKEVVAAPG------VELGSV-----------VPFTTMQGAVSRNMVES-L 264
Query: 276 TTPHLYLSQDVILDPLLAFRNELKEQHGVKVSVNDIVIKAVALALRNVPEANAYWNNDKE 335
P + + D L A ++K + V++ ++ KA ALAL P N+ +
Sbjct: 265 GVPTFRVGYTISTDALDALYKKIKSKG---VTMTALLAKATALALAKHPVVNSSCRDGNS 321
Query: 336 QAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGG 395
S+++++AVA + GL+TP+++NAD+ I ++S + K+L +KARA +L P E+ G
Sbjct: 322 FVYNS-SINVAVAVAIDGGLITPVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTG 380
Query: 396 TFSISNLGMYPVDHFCAIINPPQSGILAVGRGNKIIEPVVDSDGTEKATVVTKMSLTLSA 455
TF++SNLGM+ VD F AI+ P I+AVG +P V + + + +M + ++A
Sbjct: 381 TFTLSNLGMFGVDRFDAILPPGTGAIMAVGAS----QPSVVATKDGRIGMKNQMQVNVTA 436
Query: 456 DHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
DHRV G +F L+ D + L
Sbjct: 437 DHRVIYGADLAQFLQTLASIIEDPKDLTF 465
>AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465
Length = 464
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 127/234 (54%), Gaps = 15/234 (6%)
Query: 257 IPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFRNELK----EQHGVKVSVNDIV 312
+P +++RK +A RL +S+ T L +V + L+ R++ K E+HGVK+ +
Sbjct: 238 VPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGF 297
Query: 313 IKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAIS 372
IKA AL++ P NA + D + V DISIAV T KGL+ P+IR AD+ + I
Sbjct: 298 IKAAVSALQHQPVVNAVIDGDDIIYRDYV--DISIAVGTSKGLVVPVIRGADKMNFAEIE 355
Query: 373 SEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHFCAIINPPQSGILAVGRGNKIIE 432
+ LA+KA G ++ +E GG+F++SN G+Y IINPPQS IL G + +
Sbjct: 356 KTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAIL--GMHSIVSR 413
Query: 433 PVVDSDGTEKATVVTK--MSLTLSADHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
P+V +VV + M + L+ DHR+ DG+ F + D +RLLL
Sbjct: 414 PMVVG-----GSVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLLL 462
>AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465
Length = 464
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 129/239 (53%), Gaps = 15/239 (6%)
Query: 252 DAYEDIPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFRNELK----EQHGVKVS 307
D +P +++RK +A RL +S+ T L +V + L+ R++ K E+HGVK+
Sbjct: 233 DRERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFLEKHGVKLG 292
Query: 308 VNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKT 367
+ IKA AL++ P NA + D + V DISIAV T KGL+ P+IR+AD+
Sbjct: 293 LMSGFIKAAVSALQHQPVVNAVIDGDDIIYRDYV--DISIAVGTSKGLVVPVIRDADKMN 350
Query: 368 ISAISSEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHFCAIINPPQSGILAVGRG 427
+ I + LA+KA G ++ +E GG+F++SN G+Y IINPPQS IL G
Sbjct: 351 FADIEKTINGLAKKATEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAIL--GMH 408
Query: 428 NKIIEPVVDSDGTEKATVVTK--MSLTLSADHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
+ + P+V +VV + M + L+ DHR+ DG+ F + D +RLLL
Sbjct: 409 SIVQRPMVVG-----GSVVPRPMMYVALTYDHRLIDGREAVYFLRRIKDVVEDPQRLLL 462
>AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484
Length = 483
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 192/405 (47%), Gaps = 42/405 (10%)
Query: 74 IAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIA-VT 132
+ KW +EG+ +E +CE+++DKAT+E S +G +A I G ++VG+ + +
Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDI-IKVGETLVRLA 150
Query: 133 VEDLEDIKNIPADAS----FGGEQKEQSIASEAQKVETDAAKESSIITRISPAAKLLIKE 188
VED +D + D+S GG ++ E+ + +PA + L K+
Sbjct: 151 VEDSQD-SLLTTDSSEIVTLGGSKQ---------------GTENLLGALSTPAVRNLAKD 194
Query: 189 HRLDQSVLNASGPRGTLLKGDVXXXXXXXXXXXXTKQKNAPAAPSSQPTHDFQAQSVTIP 248
+D +V+ +G G +LK DV + QK S SV+
Sbjct: 195 LGIDINVITGTGKDGRVLKEDVLRF---------SDQKGFVTDSVSSEHAVIGGDSVSTK 245
Query: 249 QQNDAYED--IPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFRNELKEQHG--- 303
++ +ED +P + + K + + + PH + +++ D L+ + KE +
Sbjct: 246 ASSN-FEDKTVPLRGFSRAMVKTMTMA-TSVPHFHFVEEINCDSLVELKQFFKENNTDST 303
Query: 304 VKVSVNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNA 363
+K + +IK++++AL P N+ +N + + S +I +A+ATE GL+ P I+N
Sbjct: 304 IKHTFLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNIGVAMATEHGLVVPNIKNV 363
Query: 364 DQKTISAISSEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHFCAIINPPQSGILA 423
++ I+ E+ +L A KL P + GGT ++SN+G ++N P+ I+A
Sbjct: 364 QSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGKFGSPLLNLPEVAIIA 423
Query: 424 VGRGNKIIEPVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKF 468
+GR K+ P +GT + M + ++ADHRV DG +F
Sbjct: 424 LGRIEKV--PKFSKEGTVYPASI--MMVNIAADHRVLDGATVARF 464
>AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481
Length = 480
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 18/304 (5%)
Query: 176 TRISPAAKLLIKEHRLDQSVLNASGPRGTLLKGDVXXXXXXXXXXXXTKQKNAPAAPSSQ 235
T +P AK L K+H++D + +GP G + DV P P +
Sbjct: 186 TVATPYAKKLAKQHKVDIESVAGTGPFGRITASDVETAAGIAPSKSSIAPPPPPPPPVTA 245
Query: 236 PTHDFQAQSVTIPQQNDAYEDIPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFR 295
+A + +P +P + ++ ++K ++ES + P + V D L A
Sbjct: 246 -----KATTTNLPPLLPDSSIVPFTAMQSAVSKNMIES-LSVPTFRVGYPVNTDALDALY 299
Query: 296 NELKEQHGVKVSVNDIVIKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGL 355
++K + V++ ++ KA +AL P NA + K + S++I++AVA GL
Sbjct: 300 EKVKPKG---VTMTALLAKAAGMALAQHPVVNASCKDGKSFSYNS-SINIAVAVAINGGL 355
Query: 356 MTPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHFCAIIN 415
+TP++++AD+ + +S + K+L KAR+ +L P+E+ GTF++SNLGM+ VD F AI+
Sbjct: 356 ITPVLQDADKLDLYLLSQKWKELVGKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILP 415
Query: 416 PPQSGILAVGRGNKIIEPVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKFFTELSQN 475
P Q I+AVG + V D DG +V M + ++ADHR+ G F Q
Sbjct: 416 PGQGAIMAVGASKPTV--VADKDGF--FSVKNTMLVNVTADHRIVYGADLAAFL----QT 467
Query: 476 FGDI 479
F I
Sbjct: 468 FAKI 471
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,818,025
Number of extensions: 403201
Number of successful extensions: 826
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 800
Number of HSP's successfully gapped: 9
Length of query: 484
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 382
Effective length of database: 8,310,137
Effective search space: 3174472334
Effective search space used: 3174472334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)