Os04g0394200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 2-oxoglutarate dehydrogenase E2 subunit.
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Os04g0394200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 2-oxoglutarate dehydrogenase E2 subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.66 | 0.256 | 12.3 | -0.111 | 0.421 | 0.615 | -0.106 | 0.742 | -0.1 | 9.23 | 70.99 | 16429 | -- | -- |
| 30.48 | 0.257 | 12.3 | -0.169 | 0.41 | 0.667 | -0.202 | -- | -0.104 | 9.05 | 71 | 16360 | -- | -- |
| 29.7 | 0.254 | 12.3 | -0.113 | 0.421 | 0.617 | -- | 0.752 | -0.101 | 9.25 | 70.97 | 16415 | -- | -- |
| 30.48 | 0.257 | 12.3 | -0.198 | 0.412 | 0.678 | -- | -- | -0.121 | 9.19 | 70.1 | 16356 | -- | -- |
| 39.06 | 0.291 | 12.3 | -0.122 | -- | 0.627 | -- | 0.683 | -0.0921 | -- | 70.96 | 15997 | -- | -- |
| 39 | 0.293 | 12.2 | -0.301 | 0.389 | -- | -0.143 | -- | 0.0305 | 9.11 | -- | -- | -- | -- |
| 39.07 | 0.293 | 12.2 | -0.305 | 0.39 | -- | -- | -- | 0.0305 | 9.15 | -- | -- | -- | -- |
| 39.74 | 0.294 | 12.3 | -0.201 | -- | 0.661 | -- | -- | -0.109 | -- | 70.08 | 15975 | -- | -- |
| 31.45 | 0.261 | 12.3 | -- | 0.421 | 0.719 | -- | -- | -0.112 | 9.22 | 70.61 | 16356 | -- | -- |
| 47.85 | 0.323 | 12.2 | -0.307 | -- | -- | -- | -- | 0.0325 | -- | -- | -- | -- | -- |
| 41.53 | 0.301 | 12.2 | -- | 0.389 | -- | -- | -- | 0.0645 | 9.21 | -- | -- | -- | -- |
| 40.77 | 0.297 | 12.3 | -- | -- | 0.698 | -- | -- | -0.0975 | -- | 70.81 | 15949 | -- | -- |
| 50.33 | 0.331 | 12.2 | -- | -- | -- | -- | -- | 0.0665 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 3 | 28.75 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 4 | 28.77 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 7 | 28.85 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 11 | 29.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 14 | 29.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 15 | 29.13 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 21 | 29.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 29 | 29.26 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 34 | 29.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 50 | 29.46 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 59 | 29.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 86 | 29.75 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 91 | 29.77 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 106 | 29.90 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 121 | 29.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 126 | 30.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 132 | 30.06 | wind | 1.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 134 | 30.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 135 | 30.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 167 | 30.22 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 168 | 30.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 170 | 30.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 174 | 30.25 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 184 | 30.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 197 | 30.36 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 198 | 30.36 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 6 |
| 210 | 30.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 216 | 30.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 218 | 30.42 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 222 | 30.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 224 | 30.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 234 | 30.49 | wind | 1.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 280 | 30.63 | wind | 1.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 281 | 30.64 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 282 | 30.64 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 283 | 30.65 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 302 | 30.71 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 303 | 30.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 313 | 30.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 326 | 30.77 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 336 | 30.79 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 351 | 30.82 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 354 | 30.83 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 355 | 30.83 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 402 | 30.91 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 408 | 30.91 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 410 | 30.92 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 411 | 30.92 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 419 | 30.92 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 460 | 30.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 465 | 30.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 468 | 30.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 481 | 30.97 | humidity | 70.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 516 | 30.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 520 | 30.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 529 | 31.01 | humidity | 70.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 530 | 31.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 533 | 31.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 540 | 31.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 542 | 31.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 543 | 31.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 549 | 31.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 550 | 31.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 576 | 31.05 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 635 | 31.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 656 | 31.10 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 665 | 31.11 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 15 |
| 682 | 31.12 | humidity | 70.0 | 14400 | < th | dose independent | no | NA | NA |
| 752 | 31.12 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 753 | 31.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 756 | 31.13 | humidity | 70.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 760 | 31.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 807 | 31.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 828 | 31.14 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 830 | 31.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 897 | 31.16 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 936 | 31.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 946 | 31.19 | humidity | 70.0 | 14400 | > th | dose independent | no | NA | NA |
| 957 | 31.19 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 14 |