BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0394200 Os04g0394200|AK068154
         (440 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0394200  Similar to 2-oxoglutarate dehydrogenase E2 sub...   832   0.0  
Os02g0514766  Similar to 2-oxoglutarate dehydrogenase E2 sub...   576   e-164
Os07g0410100  Similar to Dihydrolipoamide S-acetyltransferas...   159   4e-39
Os02g0105200  Similar to Dihydrolipoamide S-acetyltransferas...   155   5e-38
Os06g0105400  Similar to Dihydrolipoamide S-acetyltransferas...   133   3e-31
Os06g0499900  Similar to Dihydrolipoamide acetyltransferase ...   132   4e-31
AK108134                                                          119   3e-27
Os09g0408600  Similar to Dihydrolipoamide S-acetyltransferas...    99   6e-21
Os12g0182200  Similar to Dihydrolipoamide S-acetyltransferase      92   8e-19
Os08g0431300  Similar to Dihydrolipoamide S-acetyltransferase      91   2e-18
>Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 subunit
          Length = 440

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/427 (96%), Positives = 411/427 (96%)

Query: 14  NATLGLIRSYSHARNYSSQLSALIPIGSQSSKLTRRRYYLPNASPYQLWSRSFASDNGDQ 73
           NATLGLIRSYSHARNYSSQLSALIPIGSQSSKLTRRRYYLPNASPYQLWSRSFASDNGDQ
Sbjct: 14  NATLGLIRSYSHARNYSSQLSALIPIGSQSSKLTRRRYYLPNASPYQLWSRSFASDNGDQ 73

Query: 74  VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIAS 133
           VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIAS
Sbjct: 74  VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIAS 133

Query: 134 EGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETKPKLEEKSXXXXXXXXX 193
           EGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETKPKLEEKS         
Sbjct: 134 EGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETKPKLEEKSPKAEPPKMP 193

Query: 194 XXXXXXXTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRS 253
                  TEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRS
Sbjct: 194 LPPKTSPTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRS 253

Query: 254 DYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKG 313
           DYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKG
Sbjct: 254 DYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKG 313

Query: 314 LVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPII 373
           LVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPII
Sbjct: 314 LVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPII 373

Query: 374 NPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDP 433
           NPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDP
Sbjct: 374 NPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDP 433

Query: 434 RRLLLDI 440
           RRLLLDI
Sbjct: 434 RRLLLDI 440
>Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 subunit
          Length = 386

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 286/356 (80%), Positives = 307/356 (86%), Gaps = 4/356 (1%)

Query: 81  MGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEGDTVTP 140
           MGES+TDGTLA FLKKPGDRVEADEPIAQIETDKVT+DVASPEAG+IEKF+ASEG  VTP
Sbjct: 1   MGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASEGGIVTP 60

Query: 141 GTKVAIISKSAAPAETHVAPSEDSTPKET--PPKAEETKPKLEEKSXXXXXXXXXXXXXX 198
           G KVAIISKSAA ++TH   SED++ K +  PP  +E K  +E K               
Sbjct: 61  GVKVAIISKSAAQSKTHTQSSEDTSQKHSTKPPSTKENK--VEAKPPKVESSTTHESKLT 118

Query: 199 XXTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDE 258
             +EPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAML TFNEVDMTNLMKL SDYKD+
Sbjct: 119 SSSEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLITFNEVDMTNLMKLLSDYKDQ 178

Query: 259 FVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPV 318
           FV KHGVKLGLMSCFVKAAV+ALQNQPIVNAVIDGDDIIYR+Y+DISVAVGTSKGLVV V
Sbjct: 179 FVEKHGVKLGLMSCFVKAAVSALQNQPIVNAVIDGDDIIYREYIDISVAVGTSKGLVVLV 238

Query: 319 IRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQS 378
           I D D MNFADIEKGIN LAKKATEGA SI+ MAGGTFTISNGGVYGSLISTPIIN PQS
Sbjct: 239 IHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTISNGGVYGSLISTPIINSPQS 298

Query: 379 AILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPR 434
           +ILGMHSIVQR VVV+G++LARPMMYLAL YDHRLIDGREAV FLRRIKDVVEDPR
Sbjct: 299 SILGMHSIVQRLVVVNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPR 354
>Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
          Length = 541

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 187/422 (44%), Gaps = 58/422 (13%)

Query: 75  EAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASE 134
           E  +P +  ++T+G +A +LKK GD+V   E + ++ETDK T+++   E G + K I  +
Sbjct: 120 EIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGD 179

Query: 135 GDT-VTPGTKVAI------------------ISKSAAPAE--THVAPSEDSTPKETPPKA 173
           G   +  G  +A+                  ++   AP+E      P+E    +  P KA
Sbjct: 180 GSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKA 239

Query: 174 EETK-PKLEEKSXXXXXXXXXXXXXXXXTEPQLP-------------------------- 206
            E K P+ EE S                 +  +P                          
Sbjct: 240 SELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGC 299

Query: 207 -------PKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEF 259
                  P      VP  ++RK  ANRL  S+ T        +  + NL+KLR +     
Sbjct: 300 RKEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQ 359

Query: 260 VTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVI 319
            +  G K+ +    +KAA  AL+  P  N+    D I     V+I+VAV T  GL VPVI
Sbjct: 360 ESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVI 419

Query: 320 RDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQS 378
           RDAD      I + +  LA++A + +L  D+  GGTFTISN GG +G      IINPPQS
Sbjct: 420 RDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQS 479

Query: 379 AILGMHSIVQR--PVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRL 436
           AIL + S  +R  P   +G       M   ++ DHR+IDG     FL+  K  +E+P  +
Sbjct: 480 AILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSM 539

Query: 437 LL 438
           LL
Sbjct: 540 LL 541
>Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
          Length = 548

 Score =  155 bits (393), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 192/429 (44%), Gaps = 69/429 (16%)

Query: 75  EAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASE 134
           E  +P +  ++T+G +A +LKK GD+V   E + ++ETDK T+++   E G + K I  +
Sbjct: 124 EIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGD 183

Query: 135 G-DTVTPGTKVAII---------------SKSAAPAETHVAPSE-------------DST 165
           G   +  G  +A+                S SAAPA    APSE             ++ 
Sbjct: 184 GAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPA----APSEPKAQPEPAEPKVKETE 239

Query: 166 PKETP----PKAEE-TKP-----------KLEEKSXXXXXXXX----------------- 192
           P  TP    PK EE ++P           KL E +                         
Sbjct: 240 PSRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYL 299

Query: 193 XXXXXXXXTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLR 252
                    E    P      VP  ++RK  ANRL  S+ T        +  + NL+KLR
Sbjct: 300 ASVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLR 359

Query: 253 SDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSK 312
            +      +  G K+ +    +KAA  AL+  P  N+    D I     V+I+VAV T  
Sbjct: 360 GELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEH 419

Query: 313 GLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTP 371
           GL VPVIRDAD      I + +  +A++A + +L  ++  GGTFTISN GG +G      
Sbjct: 420 GLFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCA 479

Query: 372 IINPPQSAILGMHSIVQR--PVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDV 429
           IINPPQSAIL + +  +R  P  VDG       M   ++ DHR+IDG     FL+  K  
Sbjct: 480 IINPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGY 539

Query: 430 VEDPRRLLL 438
           +E+P  +LL
Sbjct: 540 IENPNSMLL 548
>Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
          Length = 550

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 2/227 (0%)

Query: 214 VPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCF 273
           +P  ++RK  ANRL  S+ T        +  +  L+KLRS+      T  G K+ +    
Sbjct: 324 LPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLV 383

Query: 274 VKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKG 333
           +KAA  AL+N P  N+    D I     V+I+VAV T  GL VPVIRDAD    A I   
Sbjct: 384 IKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIADE 443

Query: 334 INALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQSAILGMHSIVQRPV- 391
           +  LA++A + +L  ++  GGTFT+SN GG +G      I+NPPQSAIL + S  +R + 
Sbjct: 444 VKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIP 503

Query: 392 VVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
             +G       M   L+ DHR+IDG     +++  K  +E+P  +LL
Sbjct: 504 GAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL 550
>Os06g0499900 Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC
           (Fragment)
          Length = 484

 Score =  132 bits (333), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 11/232 (4%)

Query: 214 VPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCF 273
           +P  ++RK IA RL +S+ T   L    +V +  L+  R++ K++    HGVK+ +    
Sbjct: 257 IPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFRNELKEQ----HGVKVSVNDIV 312

Query: 274 VKAAVTALQNQPIVNAVIDGDDIIYRDYV--DISVAVGTSKGLVVPVIRDADNMNFADIE 331
           +KA   AL+N P  NA  + D    +  V  DIS+AV T KGL+ P+IR+AD    + I 
Sbjct: 313 IKAVALALRNVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAIS 372

Query: 332 KGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAILGM---HSIVQ 388
             +  LA+KA  G L+ +E  GGTF+ISN G+Y       IINPPQS IL +   + I++
Sbjct: 373 SEVKQLAEKARAGKLAPNEFQGGTFSISNLGMYPVDHFCAIINPPQSGILAVGRGNKIIE 432

Query: 389 RPVVVDGNILARPM--MYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
             V  DG   A  +  M L L+ DHR+ DG+    F   +     D RRLLL
Sbjct: 433 PVVDSDGTEKATVVTKMSLTLSADHRVFDGQVGGKFFTELSQNFGDIRRLLL 484
>AK108134 
          Length = 467

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 17/207 (8%)

Query: 244 DMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDD-----IIY 298
           DMT++   R         K   KL  +   +KA   ALQ  P++N+ +D  D     + Y
Sbjct: 267 DMTSVTATRKKLN---AMKTSEKLTHLPFIIKATSLALQQHPLLNSALDTSDPKKPSLTY 323

Query: 299 RDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTI 358
           R   +  VAV T  GL+VPVIRD  N++ A I + + AL++KA  G L+  + +G +FTI
Sbjct: 324 RSSHNFGVAVDTPSGLLVPVIRDVQNLSIAQIAQQLKALSEKARNGKLAPGDFSGASFTI 383

Query: 359 SNGGVYGSLISTPIINPPQSAILGMHSIVQRPVVV-----DGNILARPMMYLALTYDHRL 413
           SN G  G  +  PII+ PQ AILG    V R  VV     +  ++ R  + L+ + DHR+
Sbjct: 384 SNIGSVGGGVVAPIISEPQVAILG----VGRSKVVPAFDENDQLVRREELVLSWSADHRV 439

Query: 414 IDGREAVYFLRRIKDVVEDPRRLLLDI 440
           +DG E      ++K ++E+P  +LL++
Sbjct: 440 VDGAECARCAEKVKGLLEEPTAMLLEM 466
>Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
          Length = 501

 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 95/189 (50%), Gaps = 8/189 (4%)

Query: 254 DYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVI-DGDDIIYRDYVDISVAVGTSK 312
           D   E V   GV   L+   VKAA  AL   P+VNA   DG    Y   ++I+VAV    
Sbjct: 317 DALCEKVKSKGVTKTLL--LVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEG 374

Query: 313 GLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPI 372
           GL+ PV+ D D ++   + +    L KKA    L  DE + GTFT+SN G++G      I
Sbjct: 375 GLLTPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAI 434

Query: 373 INPPQSAILGMHSIVQRPVVV---DGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDV 429
           + P Q AI+ +     RP +V   DG    +  M + +T DHR+I G +   FL+    +
Sbjct: 435 LPPGQGAIMAVGG--SRPTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKI 492

Query: 430 VEDPRRLLL 438
           +EDP  L L
Sbjct: 493 IEDPESLTL 501
>Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase
          Length = 467

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 6/172 (3%)

Query: 269 LMSCFVKAAVTALQNQPIVNAVI-DGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNF 327
           + +   KA   AL   P++N+   DG    Y   ++I+VAV    GL+ PV+ DAD ++ 
Sbjct: 296 MSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLPDADKLDI 355

Query: 328 ADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAILGMHSIV 387
             + +    L  KA    L   E   GTFTISN G++G      I+ P   AI+ + S  
Sbjct: 356 YSLSRKWKELVDKARAKQLQPHEYNSGTFTISNLGMFGVDRFDAILPPGTGAIMAVGS-- 413

Query: 388 QRPVVV---DGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRL 436
            +P +V   DG+I  +  M + +T DHR+I G +   FL+ +  ++EDP+ L
Sbjct: 414 SQPTLVGTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKIIEDPKDL 465
>Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase
          Length = 475

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 6/160 (3%)

Query: 283 NQPIVNAVI-DGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKA 341
             P+VNA   DG    Y   ++I+VAV    GL+ PV+ DAD ++   + +    L KKA
Sbjct: 318 QHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKA 377

Query: 342 TEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAILGMHSIVQRPVVV---DGNIL 398
               L  +E + GTFT+SN G++G      I+ P Q  I+ + +   +P VV   DG   
Sbjct: 378 RAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMAVGA--SKPTVVADKDGFFS 435

Query: 399 ARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
            +  M + +T DHR++ G +   FL+    ++EDP  L L
Sbjct: 436 VKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.133    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,267,158
Number of extensions: 597601
Number of successful extensions: 2042
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2019
Number of HSP's successfully gapped: 12
Length of query: 440
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 336
Effective length of database: 11,605,545
Effective search space: 3899463120
Effective search space used: 3899463120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)