Os07g0410100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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Os07g0410100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.41 | 0.272 | 9.35 | -0.263 | 0.622 | 0.65 | -0.329 | 0.722 | -0.366 | 7.97 | 70 | 7769 | -- | -- |
| 33.92 | 0.271 | 9.35 | -0.313 | 0.608 | 0.719 | -0.379 | -- | -0.405 | 7.86 | 71.18 | 9121 | -- | -- |
| 33.47 | 0.269 | 9.36 | -0.247 | 0.595 | 0.645 | -- | 0.851 | -0.378 | 8.1 | 70 | 9147 | -- | -- |
| 34.33 | 0.273 | 9.35 | -0.319 | 0.605 | 0.722 | -- | -- | -0.403 | 8 | 71.06 | 9124 | -- | -- |
| 50.54 | 0.331 | 9.36 | -0.236 | -- | 0.663 | -- | 0.778 | -0.356 | -- | 69 | 8691 | -- | -- |
| 42.74 | 0.306 | 9.31 | -0.407 | 0.558 | -- | -0.333 | -- | -0.236 | 8.03 | -- | -- | -- | -- |
| 43.05 | 0.307 | 9.31 | -0.415 | 0.557 | -- | -- | -- | -0.235 | 8.18 | -- | -- | -- | -- |
| 51.45 | 0.334 | 9.36 | -0.306 | -- | 0.688 | -- | -- | -0.369 | -- | 69 | 8679 | -- | -- |
| 36.95 | 0.283 | 9.34 | -- | 0.608 | 0.787 | -- | -- | -0.383 | 8.03 | 71.81 | 9131 | -- | -- |
| 60.12 | 0.362 | 9.33 | -0.411 | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
| 47.59 | 0.323 | 9.3 | -- | 0.554 | -- | -- | -- | -0.188 | 8.23 | -- | -- | -- | -- |
| 53.84 | 0.342 | 9.35 | -- | -- | 0.753 | -- | -- | -0.35 | -- | 69.16 | 8679 | -- | -- |
| 64.57 | 0.375 | 9.31 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.59 | humidity | 60 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 3 | 33.78 | humidity | 60 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 8 | 33.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 9 | 33.98 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 16 | 34.12 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 18 | 34.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 20 | 34.14 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 38 | 34.20 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 42 | 34.20 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 20 |
| 44 | 34.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 57 | 34.21 | humidity | 80 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 75 | 34.23 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 76 | 34.24 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 10 |
| 79 | 34.25 | humidity | 50 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 102 | 34.26 | humidity | 80 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 119 | 34.28 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 170 | 34.34 | humidity | 80 | 14400 | < th | dose dependent | sin | 20 | NA |
| 181 | 34.35 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 224 | 34.38 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 226 | 34.38 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 227 | 34.38 | humidity | 60 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 237 | 34.39 | humidity | 50 | 14400 | > th | dose dependent | sin | 22 | NA |
| 254 | 34.40 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 16 |
| 258 | 34.40 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 331 | 34.43 | humidity | 60 | 14400 | > th | dose independent | sin | 16 | NA |
| 350 | 34.44 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 365 | 34.44 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 22 |
| 426 | 34.46 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 475 | 34.48 | humidity | 70 | 4320 | < th | dose independent | sin | 20 | NA |
| 535 | 34.50 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 635 | 34.54 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 726 | 34.57 | humidity | 60 | 14400 | < th | dose independent | sin | 15 | NA |
| 797 | 34.60 | humidity | 70 | 14400 | > th | dose independent | sin | 11 | NA |
| 816 | 34.61 | humidity | 70 | 14400 | < th | dose dependent | sin | 14 | NA |
| 817 | 34.61 | humidity | 80 | 14400 | < th | dose dependent | no | NA | NA |
| 893 | 34.63 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 896 | 34.63 | humidity | 80 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 897 | 34.64 | humidity | 70 | 14400 | < th | dose independent | sin | 11 | NA |
| 900 | 34.64 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 12 |