BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0410100 Os07g0410100|AK070846
(541 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferas... 1060 0.0
Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferas... 941 0.0
Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferas... 799 0.0
Os06g0499900 Similar to Dihydrolipoamide acetyltransferase ... 335 6e-92
Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase 187 2e-47
Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase 180 2e-45
Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 sub... 167 2e-41
AK108134 160 2e-39
Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferas... 126 3e-29
Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 sub... 125 1e-28
D10961 69 1e-11
>Os07g0410100 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 541
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/541 (97%), Positives = 528/541 (97%)
Query: 1 MSAAXXXXXXXXXXXXXNALDCERSGLVRYFSTASGSFPTKGNGAEKRIGGARFPQRKQP 60
MSAA NALDCERSGLVRYFSTASGSFPTKGNGAEKRIGGARFPQRKQP
Sbjct: 1 MSAAHLLRHSRKLRSLHNALDCERSGLVRYFSTASGSFPTKGNGAEKRIGGARFPQRKQP 60
Query: 61 GKELETSKLSLGLNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQE 120
GKELETSKLSLGLNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQE
Sbjct: 61 GKELETSKLSLGLNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQE 120
Query: 121 IGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDG 180
IGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDG
Sbjct: 121 IGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDG 180
Query: 181 SKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKAS 240
SKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKAS
Sbjct: 181 SKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKAS 240
Query: 241 ELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGCR 300
ELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGCR
Sbjct: 241 ELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGCR 300
Query: 301 KEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQE 360
KEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQE
Sbjct: 301 KEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQE 360
Query: 361 SSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIR 420
SSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIR
Sbjct: 361 SSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIR 420
Query: 421 DADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSA 480
DADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSA
Sbjct: 421 DADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSA 480
Query: 481 ILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSML 540
ILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSML
Sbjct: 481 ILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSML 540
Query: 541 L 541
L
Sbjct: 541 L 541
>Os02g0105200 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 548
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/548 (86%), Positives = 497/548 (90%), Gaps = 7/548 (1%)
Query: 1 MSAAXXXXXXXXXXXXXNALDCERSGLVRYFSTASGSFPTKGN---GAEKRIGGARFPQR 57
MSAA +ALD +RS LVRYFS AS SFPTKG G EKRIGGARFPQ
Sbjct: 1 MSAAHLLRHSRKLRTLRDALDYDRSALVRYFSAASASFPTKGGAAAGVEKRIGGARFPQC 60
Query: 58 KQPGKELETSKLSLG-LNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLP 116
KQPGKELET K+SLG LNG Y CRR+PNN IP TITGLNGSLSCGQ++SARSFSSSADLP
Sbjct: 61 KQPGKELETFKVSLGGLNGRYACRRAPNNCIPTTITGLNGSLSCGQVSSARSFSSSADLP 120
Query: 117 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 176
PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII
Sbjct: 121 PHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 180
Query: 177 HGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREP 236
HGDG+KEIKVGEIIAVTVEEEGD++KFKDYKPST AAP APSE KAQ EP EPKV+E EP
Sbjct: 181 HGDGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPAEPKVKETEP 240
Query: 237 SKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLA 296
S+ E KAP+TEE S+ G RIFSSPLARKLAEDNNVPLSSV GTGPDGRILKADIEDYLA
Sbjct: 241 SRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLA 300
Query: 297 ---KGCRKEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRG 353
KG ++EALAAPGLSYTDVPN QIRKVTANRLLSSKQTIPHYYLTVD RVDNLIKLRG
Sbjct: 301 SVAKGGKREALAAPGLSYTDVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRG 360
Query: 354 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHG 413
ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWM+DFIRQYHNVNINVAVQTEHG
Sbjct: 361 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMSDFIRQYHNVNINVAVQTEHG 420
Query: 414 LFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAI 473
LFVPVIRDADKKGLG IAEEVKQ+AQRARDNSLKP+DYEGGTFTISNLGGPFGIKQFCAI
Sbjct: 421 LFVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAI 480
Query: 474 INPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 533
INPPQSAILAIG+AE+RVIPGS +GQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI
Sbjct: 481 INPPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYI 540
Query: 534 ENPTSMLL 541
ENP SMLL
Sbjct: 541 ENPNSMLL 548
>Os06g0105400 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 550
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/535 (75%), Positives = 445/535 (83%), Gaps = 15/535 (2%)
Query: 20 LDCERSGLVRYFSTASGSFPTKGNGAE---------KRIGGARFPQRKQPGKELETSKLS 70
L CER +VR+FS+++ S K + K+IGG+ F +Q GKEL+ K+S
Sbjct: 18 LGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSDFSHDRQSGKELQNFKVS 77
Query: 71 -LGLNGSYTCRRSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQEIGMPSLSPT 129
+ + R+ +P T G++ SCGQ+ +R FSS ADLPPHQEIGMPSLSPT
Sbjct: 78 PQEASRASNFMRASKYGMPITANGVHSLFSCGQVVPSRCFSSGADLPPHQEIGMPSLSPT 137
Query: 130 MTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGSKEIKVGEI 189
MTEGNIARW+KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDG+KEIKVGEI
Sbjct: 138 MTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEI 197
Query: 190 IAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKASELKAPRTEE 249
IAVTVEEE DI KFKDYK + A AP+E K QSEPTEPK E+ +P KA E KA +TEE
Sbjct: 198 IAVTVEEEEDIGKFKDYKAPSSAESAAPAESKPQSEPTEPKKEKEQP-KAPEPKATKTEE 256
Query: 250 PSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLA---KGCRKEALAA 306
S DR FSSP+ARKLAEDNNVPLSS+KGTGPDGRILKADIEDYLA KG +KE AA
Sbjct: 257 SFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAA 316
Query: 307 PGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQESSGGKK 366
PGL Y D+PN QIRKVTANRLL SKQTIPHYYLTVDTRVD LIKLR ELNPLQ++SGGKK
Sbjct: 317 PGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKK 376
Query: 367 ISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIRDADKKG 426
ISINDLVIKAAALALR VP+CNSSWMNDFIRQYHNVNINVAVQTE GLFVPVIRDADKKG
Sbjct: 377 ISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKG 436
Query: 427 LGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGS 486
L IA+EVKQLAQRARDNSLKP+DYEGGTFT+SNLGGPFGIKQFCAI+NPPQSAILAIGS
Sbjct: 437 LATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGS 496
Query: 487 AERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSMLL 541
AE+RVIPG A GQ+E GSFMSAT+SCDHRVIDGAIGAE++KAFKGYIENPT+MLL
Sbjct: 497 AEKRVIPG-AEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL 550
>Os06g0499900 Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC
(Fragment)
Length = 484
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 267/449 (59%), Gaps = 58/449 (12%)
Query: 109 FSSSADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECME 168
+ SS PPH +GMP+LSPTM +GNIA+W K+EG+K+ G+V+CE+ETDKAT+E E +E
Sbjct: 48 WLSSTGFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLE 107
Query: 169 EGYLAKIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTE 228
EGYLAKI+ +GSK+++VG+ IAVTVE+ DIK P +
Sbjct: 108 EGYLAKILAPEGSKDVQVGQPIAVTVEDLEDIKNI----------------------PAD 145
Query: 229 PKV--EEREPSKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRI 286
E++E S ASE + T+ S SP A+ L +++ + S + +GP G +
Sbjct: 146 ASFGGEQKEQSIASEAQKVETDAAKESSIITRISPAAKLLIKEHRLDQSVLNASGPRGTL 205
Query: 287 LKADIEDYLAKGC------RKEALAAPGL------------------SYTDVPNAQIRKV 322
LK D+ L G +K A AAP +Y D+PN+QIRKV
Sbjct: 206 LKGDVLAALKLGASSSSTKQKNAPAAPSSQPTHDFQAQSVTIPQQNDAYEDIPNSQIRKV 265
Query: 323 TANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALR 382
A RLL SKQT PH YL+ D +D L+ R EL + G K+S+ND+VIKA ALALR
Sbjct: 266 IAKRLLESKQTTPHLYLSQDVILDPLLAFRNEL----KEQHGVKVSVNDIVIKAVALALR 321
Query: 383 KVPQCNSSWMND--FIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGMIAEEVKQLAQR 440
VP+ N+ W ND ++ +V+I++AV TE GL P+IR+AD+K + I+ EVKQLA++
Sbjct: 322 NVPEANAYWNNDKEQAQKCVSVDISIAVATEKGLMTPIIRNADQKTISAISSEVKQLAEK 381
Query: 441 ARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGSAERRVIPGSANGQY 500
AR L P++++GGTF+ISNLG + + FCAIINPPQS ILA+G + + P +
Sbjct: 382 ARAGKLAPNEFQGGTFSISNLGM-YPVDHFCAIINPPQSGILAVGRGNKIIEPVVDSDGT 440
Query: 501 EFGSF---MSATMSCDHRVIDGAIGAEFL 526
E + MS T+S DHRV DG +G +F
Sbjct: 441 EKATVVTKMSLTLSADHRVFDGQVGGKFF 469
>Os12g0182200 Similar to Dihydrolipoamide S-acetyltransferase
Length = 467
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 230/427 (53%), Gaps = 17/427 (3%)
Query: 119 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 178
+EI MP+LS TMTEG I W EGD+++ G+ + VE+DKA +++E +G+LA ++
Sbjct: 50 REIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVP 109
Query: 179 DGSKEIKVGEIIAVTVEEEGDI--KKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREP 236
G + VG IA+ E E +I + K S+ ++ P +S P P P
Sbjct: 110 AG-ESAPVGSAIALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPPPPPPPPAP 168
Query: 237 SKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLA 296
A+ S+ G R+ +SP ARKLA+D NV L+S+ G+GP GRI+ D+E A
Sbjct: 169 VAAAVSAPAPPSPASQGGLRVVASPYARKLAKDLNVDLNSITGSGPGGRIVAKDVEAAAA 228
Query: 297 KGCRKEALAA--PGLSY-TDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRG 353
+ +AA P + + VP ++ + ++ S +P + + D L L
Sbjct: 229 APKKAAPVAAARPDVPLGSTVPFTTMQGAVSKNMVES-LAVPTFRVGYTFTTDALDALYK 287
Query: 354 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHN-VNINVAVQTEH 412
++ P K ++++ L+ KA A+AL + P NSS + Y++ +NI VAV +
Sbjct: 288 KIKP-------KGVTMSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDG 340
Query: 413 GLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCA 472
GL PV+ DADK + ++ + K+L +AR L+P +Y GTFTISNL G FG+ +F A
Sbjct: 341 GLITPVLPDADKLDIYSLSRKWKELVDKARAKQLQPHEYNSGTFTISNL-GMFGVDRFDA 399
Query: 473 IINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGY 532
I+ P AI+A+GS++ ++ G+ +G + M ++ DHRVI GA A FL+
Sbjct: 400 ILPPGTGAIMAVGSSQPTLV-GTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKI 458
Query: 533 IENPTSM 539
IE+P +
Sbjct: 459 IEDPKDL 465
>Os08g0431300 Similar to Dihydrolipoamide S-acetyltransferase
Length = 475
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 228/441 (51%), Gaps = 30/441 (6%)
Query: 119 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHG 178
+EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
Query: 179 DGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSK 238
G + VG IA+ E E D++ + LA S+ Q P P
Sbjct: 107 AG-ESAPVGAPIALLAESEDDLQ-------AALAKAQELSKAHPQQAPPPSDAAAPPPPP 158
Query: 239 ASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYL--- 295
AP P +G + ++P A+KLA+ + V L+ V GTGP GRI AD+E
Sbjct: 159 PPPAAAPAAPAPVAAGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIE 218
Query: 296 -------AKGCRKEALAAPGLSYTD-------VPNAQIRKVTANRLLSSKQTIPHYYLTV 341
A L+AP + VP A + T + SK + +
Sbjct: 219 PKPKVVPAASAAPVPLSAPAIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPA 278
Query: 342 DTRVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYH- 400
RV I + +L+ L E K +++ L+ KAAA+AL + P N+S + Y+
Sbjct: 279 -FRVGYPI-VTDKLDELYEKVKSKGVTMTVLLAKAAAMALAQHPVVNASCRDGKSFTYNT 336
Query: 401 NVNINVAVQTEHGLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISN 460
N+NI VAV + GL PV+ DADK + +++++ K+L ++AR L+P++Y GTFT+SN
Sbjct: 337 NINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSN 396
Query: 461 LGGPFGIKQFCAIINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGA 520
LG FG+ +F AI+ P Q I+A+G+++ V+ +G + S M ++ DHR++ GA
Sbjct: 397 LGM-FGVDRFDAILPPGQGGIMAVGASKPTVV-ADKDGFFSVKSKMLVNVTADHRIVYGA 454
Query: 521 IGAEFLKAFKGYIENPTSMLL 541
A FL+ F IE+P S+ L
Sbjct: 455 DLAAFLQTFAKIIEDPESLTL 475
>Os04g0394200 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 440
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 200/440 (45%), Gaps = 68/440 (15%)
Query: 106 ARSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEME 165
+RSF+S D E +P + ++T+G +A +LKK GD+V E + ++ETDK T+++
Sbjct: 63 SRSFAS--DNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVA 120
Query: 166 CMEEGYLAKIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAP----VAPSELK 221
E G + K I +G + G +A+ S AAP VAPSE
Sbjct: 121 SPEAGVIEKFIASEGDT-VTPGTKVAII---------------SKSAAPAETHVAPSEDS 164
Query: 222 AQSEPTEPKVEEREPSKASELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTG 281
E T PK EE +P E K+P+ E P +PL
Sbjct: 165 TPKE-TPPKAEETKPKL--EEKSPKAEPP--------------------KMPLP------ 195
Query: 282 PDGRILKADIEDYLAKGCRKEALAAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTV 341
K E P VP ++RK ANRL S+ T
Sbjct: 196 --------------PKTSPTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFN 241
Query: 342 DTRVDNLIKLRGELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHN 401
+ + NL+KLR + + G K+ + +KAA AL+ P N+ D I
Sbjct: 242 EVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDY 301
Query: 402 VNINVAVQTEHGLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNL 461
V+I+VAV T GL VPVIRDAD I + + LA++A + +L D+ GGTFTISN
Sbjct: 302 VDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISN- 360
Query: 462 GGPFGIKQFCAIINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAI 521
GG +G IINPPQSAIL + S +R P +G M ++ DHR+IDG
Sbjct: 361 GGVYGSLISTPIINPPQSAILGMHSIVQR--PVVVDGNILARPMMYLALTYDHRLIDGRE 418
Query: 522 GAEFLKAFKGYIENPTSMLL 541
FL+ K +E+P +LL
Sbjct: 419 AVYFLRRIKDVVEDPRRLLL 438
>AK108134
Length = 467
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 224/470 (47%), Gaps = 64/470 (13%)
Query: 107 RSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMEC 166
R+F S+ L + + + +TE + +W + G +V + LCEV++DKA+VE+
Sbjct: 24 RAFHRSSRLDVVKPFLLADIGEGITECQLIQWFVQPGARVEHFDKLCEVQSDKASVEITS 83
Query: 167 MEEGYLAKIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEP 226
+G + K+ + ++ V V ++ +GD + A +E ++E
Sbjct: 84 PFDGVIKKLYYE--PDDMAVTGRPLVDIDMDGDEAE-------------AEAEKLGEAET 128
Query: 227 TEPKVEEREPSKASELKAPRTEEPSRSGD-----RIFSSPLARKLAEDNNVPLSSVKGTG 281
+ K E + + AS R E R+G+ ++P R L ++ NV ++ V+GTG
Sbjct: 129 SADKGENTKVNTASHETESRPTERRRNGNGKDDFSSLATPAVRHLMKELNVNITDVEGTG 188
Query: 282 PDGRILKADIEDYLAKGCRKE----------------------ALAAPGLSYTDVPNAQI 319
DGR+ K D+ ++++ +++ A L T V Q+
Sbjct: 189 RDGRVTKEDVHRFVSQKTQQQMEVESPSTSPASTSASTSTLSTATQDQKLPLTPV-QTQM 247
Query: 320 RKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQESSGGKKISINDLVIKAAAL 379
KV L +IPH+ + + ++ R +LN ++ S +K++ +IKA +L
Sbjct: 248 FKVMTKSL-----SIPHFLYSCSADMTSVTATRKKLNAMKTS---EKLTHLPFIIKATSL 299
Query: 380 ALRKVPQCNSSWMND-------FIRQYHNVNINVAVQTEHGLFVPVIRDADKKGLGMIAE 432
AL++ P NS+ R HN VAV T GL VPVIRD + IA+
Sbjct: 300 ALQQHPLLNSALDTSDPKKPSLTYRSSHN--FGVAVDTPSGLLVPVIRDVQNLSIAQIAQ 357
Query: 433 EVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAIGSAERRVI 492
++K L+++AR+ L P D+ G +FTISN+G G II+ PQ AIL +G + +V+
Sbjct: 358 QLKALSEKARNGKLAPGDFSGASFTISNIGS-VGGGVVAPIISEPQVAILGVGRS--KVV 414
Query: 493 PG-SANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSMLL 541
P N Q + + S DHRV+DGA A + KG +E PT+MLL
Sbjct: 415 PAFDENDQLVRREELVLSWSADHRVVDGAECARCAEKVKGLLEEPTAMLL 464
>Os09g0408600 Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)
Length = 501
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Query: 354 ELNPLQESSGGKKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHN-VNINVAVQTEH 412
+L+ L E K ++ L++KAAA+AL + P N+S + Y++ +NI VAV E
Sbjct: 315 KLDALCEKVKSKGVTKTLLLVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEG 374
Query: 413 GLFVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCA 472
GL PV+ D DK + ++A++ + L ++AR L+PD+Y GTFT+SNLG FG+ +F A
Sbjct: 375 GLLTPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGM-FGVDRFDA 433
Query: 473 IINPPQSAILAIGSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGY 532
I+ P Q AI+A+G + R + + +G + + M ++ DHR+I GA A FL+ F
Sbjct: 434 ILPPGQGAIMAVGGS-RPTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKI 492
Query: 533 IENPTSMLL 541
IE+P S+ L
Sbjct: 493 IEDPESLTL 501
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 120 EIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGD 179
EI MP+LS TMTEG I W EGD+V+ G+ + VE+DKA +++E +G +A ++
Sbjct: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
Query: 180 GSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSEPTEPKVEEREPSKA 239
G + VG IA+ E E ++ + A P P Q P + P
Sbjct: 114 G-ESAPVGAPIALLAESE---EEVAVAQARAQALPRGP----GQEPPPPHVPKAAPPPPP 165
Query: 240 SELKAPRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIE 292
P G ++P A+KLA+ + V +S V GTGP GR+ AD+E
Sbjct: 166 PPPPHAPPGPPPTKG---VATPHAKKLAKQHRVDISMVVGTGPHGRVTGADVE 215
>Os02g0514766 Similar to 2-oxoglutarate dehydrogenase E2 subunit
Length = 386
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 175/414 (42%), Gaps = 66/414 (15%)
Query: 129 TMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGSKEIKVGE 188
++T+G +A +LKK GD+V E + ++ETDK T+++ E G + K + + G
Sbjct: 4 SITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASE-------GG 56
Query: 189 IIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQS-EPTEPKVEEREPSKAS---ELKA 244
I+ V K + ++ A S+ QS E T K + PS E K
Sbjct: 57 IVTPGV------------KVAIISKSAAQSKTHTQSSEDTSQKHSTKPPSTKENKVEAKP 104
Query: 245 PRTEEPSRSGDRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGCRKEAL 304
P+ E + ++ SS E
Sbjct: 105 PKVESSTTHESKLTSS----------------------------------------SEPQ 124
Query: 305 AAPGLSYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELNPLQESSGG 364
P VP ++RK ANRL S+ T + + NL+KL + G
Sbjct: 125 LPPKERERRVPMPRLRKRIANRLKDSQNTFAMLITFNEVDMTNLMKLLSDYKDQFVEKHG 184
Query: 365 KKISINDLVIKAAALALRKVPQCNSSWMNDFIRQYHNVNINVAVQTEHGLFVPVIRDADK 424
K+ + +KAA AL+ P N+ D I ++I+VAV T GL V VI D D
Sbjct: 185 VKLGLMSCFVKAAVSALQNQPIVNAVIDGDDIIYREYIDISVAVGTSKGLVVLVIHDIDA 244
Query: 425 KGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINPPQSAILAI 484
I + + LA++A + + ++ GGTFTISN GG +G IIN PQS+IL +
Sbjct: 245 MNFADIEKGINNLAKKATEGAQSINNMAGGTFTISN-GGVYGSLISTPIINSPQSSILGM 303
Query: 485 GSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIENPTS 538
S +R++ NG M + DHR+IDG FL+ K +E+P S
Sbjct: 304 HSIVQRLV--VVNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPRS 355
>D10961
Length = 94
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 109 FSSSADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVET 157
+ SS PPH +GMP+ SPTM +GNIA+W K+EG+K+ G+V+CE+ET
Sbjct: 46 WLSSTGFPPHLVVGMPAXSPTMNQGNIAKWRKQEGEKIEVGDVICEIET 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,842,398
Number of extensions: 843603
Number of successful extensions: 2096
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2058
Number of HSP's successfully gapped: 13
Length of query: 541
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 435
Effective length of database: 11,501,117
Effective search space: 5002985895
Effective search space used: 5002985895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)