Os09g0408600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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Os09g0408600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.07 | 0.282 | 11.1 | 0.782 | 0.505 | -0.955 | -0.00329 | 4.06 | 0.168 | 2.13 | 25.15 | 1888 | -- | -- |
| 38.27 | 0.288 | 11.1 | 0.241 | 0.625 | -0.723 | 0.214 | -- | 0.252 | 2.89 | 20.03 | 15553 | -- | -- |
| 35.77 | 0.279 | 11.1 | 0.95 | 0.582 | -1.01 | -- | 4.84 | 0.181 | 2.31 | 25.8 | 2359 | -- | -- |
| 36.94 | 0.283 | 11.2 | 0.42 | 0.586 | -0.878 | -- | -- | 0.199 | 2.91 | 15.8 | 24307 | -- | -- |
| 49.08 | 0.328 | 11.2 | -0.182 | -- | -0.928 | -- | 0.45 | -0.0763 | -- | 25.8 | 3178 | -- | -- |
| 49.88 | 0.331 | 11.2 | -0.364 | 0.547 | -- | 0.0153 | -- | -0.135 | 3.02 | -- | -- | -- | -- |
| 49.88 | 0.331 | 11.2 | -0.364 | 0.547 | -- | -- | -- | -0.135 | 3.02 | -- | -- | -- | -- |
| 46.02 | 0.317 | 11.2 | -0.16 | -- | -0.94 | -- | -- | 0.0295 | -- | 20.6 | 6192 | -- | -- |
| 38.39 | 0.289 | 11.2 | -- | 0.576 | -0.646 | -- | -- | 0.174 | 2.93 | 19.4 | 15468 | -- | -- |
| 67.03 | 0.383 | 11.2 | -0.341 | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
| 53.37 | 0.342 | 11.2 | -- | 0.54 | -- | -- | -- | -0.0947 | 3.02 | -- | -- | -- | -- |
| 46.64 | 0.319 | 11.2 | -- | -- | -0.972 | -- | -- | 0.0516 | -- | 20.67 | 9035 | -- | -- |
| 70.09 | 0.391 | 11.2 | -- | -- | -- | -- | -- | -0.0833 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 2 | 32.47 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 13 |
| 9 | 32.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 11 | 32.57 | humidity | 90 | 43200 | > th | dose independent | sin | 14 | NA |
| 16 | 32.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 21 | 32.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 64 | 32.80 | humidity | 90 | 43200 | < th | dose independent | sin | 14 | NA |
| 96 | 32.95 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 150 | 33.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 166 | 33.14 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 177 | 33.15 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 214 | 33.23 | humidity | 90 | 43200 | > th | dose dependent | sin | 13 | NA |
| 249 | 33.28 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 250 | 33.28 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 368 | 33.45 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 425 | 33.54 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 434 | 33.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 503 | 33.62 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 505 | 33.62 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 518 | 33.64 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 535 | 33.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 669 | 33.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 676 | 33.81 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 684 | 33.82 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 718 | 33.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 726 | 33.89 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 732 | 33.89 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 767 | 33.95 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 782 | 33.96 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 791 | 33.98 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 815 | 34.03 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 871 | 34.11 | radiation | 20 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 886 | 34.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 901 | 34.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 905 | 34.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 930 | 34.18 | temperature | 15 | 43200 | < th | dose dependent | sin | 10 | NA |
| 941 | 34.20 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 1000 | 34.28 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 2 |