BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0408600 Os09g0408600|AK060606
(501 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481 386 e-107
AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466 331 4e-91
AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540 128 6e-30
AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540 127 2e-29
AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714 101 7e-22
AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484 101 8e-22
AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465 100 2e-21
AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465 97 2e-20
>AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481
Length = 480
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/222 (81%), Positives = 203/222 (91%)
Query: 280 ATVVPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTLLLVKAAA 339
+++VPFT MQ+AVS+NM+ESLSVPTFRVGY V TD LDAL EKVK KGVT T LL KAA
Sbjct: 259 SSIVPFTAMQSAVSKNMIESLSVPTFRVGYPVNTDALDALYEKVKPKGVTMTALLAKAAG 318
Query: 340 MALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQKWRGL 399
MAL QHPVVNASC+DGKSFSYNSSINIAVAVAI GGL+TPVL+D DKLD+YLL+QKW+ L
Sbjct: 319 MALAQHPVVNASCKDGKSFSYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKEL 378
Query: 400 LKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRPTLVANKDGF 459
+ KAR KQLQP EY+SGTFTLSNLGMFGVDRFDAILPPGQGAIMAVG S+PT+VA+KDGF
Sbjct: 379 VGKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADKDGF 438
Query: 460 FSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
FS+KN MLVNVTADHRI+YGADLAAFLQTFAKIIE+P+SLTL
Sbjct: 439 FSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 480
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 61/70 (87%)
Query: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
EIFMPALSSTMTEG+IVSW EG+++AKG+ VVVVESDKADMDVETFYDG +A ++V
Sbjct: 57 EIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIVVGE 116
Query: 114 GESAPVGAPI 123
GE+APVGA I
Sbjct: 117 GETAPVGAAI 126
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 185 HAKKLAKQHRVDISMVVGTGPHGRVTGADVEAAAGIKP 222
+AKKLAKQH+VDI V GTGP GR+T +DVE AAGI P
Sbjct: 191 YAKKLAKQHKVDIESVAGTGPFGRITASDVETAAGIAP 228
>AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466
Length = 465
Score = 331 bits (849), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 190/221 (85%)
Query: 281 TVVPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTLLLVKAAAM 340
+VVPFTTMQ AVSRNM+ESL VPTFRVGY + TD LDAL +K+KSKGVT T LL KA A+
Sbjct: 245 SVVPFTTMQGAVSRNMVESLGVPTFRVGYTISTDALDALYKKIKSKGVTMTALLAKATAL 304
Query: 341 ALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQKWRGLL 400
AL +HPVVN+SCRDG SF YNSSIN+AVAVAI+GGL+TPVL++ DK+D+Y L++KW+ L+
Sbjct: 305 ALAKHPVVNSSCRDGNSFVYNSSINVAVAVAIDGGLITPVLQNADKVDIYSLSRKWKELV 364
Query: 401 KKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRPTLVANKDGFF 460
KAR KQLQP EY++GTFTLSNLGMFGVDRFDAILPPG GAIMAVG S+P++VA KDG
Sbjct: 365 DKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSVVATKDGRI 424
Query: 461 SIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
+KN+M VNVTADHR+IYGADLA FLQT A IIEDP+ LT
Sbjct: 425 GMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDLTF 465
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
EIFMPALSSTMTEG+IVSW +EGD++ KG+ VVVVESDKADMDVETFYDG +A ++V
Sbjct: 41 EIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEE 100
Query: 114 GESAPVGAPI 123
G APVG+ I
Sbjct: 101 GGVAPVGSAI 110
>AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540
Length = 539
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 125/218 (57%), Gaps = 10/218 (4%)
Query: 293 SRNMMESLSVPTFRVGYAVCTDKLDALCEKVKS-------KGVTKTLLLVKAAAMALTQH 345
SR ++P + + C DKL AL ++ S K ++ L+VKAAA+AL +
Sbjct: 323 SRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLVVKAAALALRKV 382
Query: 346 PVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQKWRGLLKKARM 405
P N+S D + + +NI VAV E GL PV++D D+ + + ++ R L +KA+
Sbjct: 383 PQCNSSWTDDYIRQFKN-VNINVAVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQKAKE 441
Query: 406 KQLQPDEYSSGTFTLSNL-GMFGVDRFDAILPPGQGAIMAVGGSRPTLV-ANKDGFFSIK 463
L+P++Y GTFT+SNL G FG+ +F A++ P Q AI+AVG + +V N F+
Sbjct: 442 NSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFNFA 501
Query: 464 NEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
+ M V ++ DHR++ GA A +L+ F IE+P+S+ L
Sbjct: 502 SYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
EI MP+LS TMTEG I W EGD+VA G+ + VE+DKA +++E +G +A ++
Sbjct: 113 EIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAE 172
Query: 114 G 114
G
Sbjct: 173 G 173
>AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540
Length = 539
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 283 VPFTTMQA-AVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKS-------KGVTKTLLL 334
+P T ++ SR ++P + + C DK+ L ++ S K ++ L+
Sbjct: 312 IPHTQIRKVTASRLAFSKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDLV 371
Query: 335 VKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQ 394
+KAAA+AL + P N+S D + + +NI VAV E GL PV++D DK + + +
Sbjct: 372 IKAAALALRKVPQCNSSWTDEYIRQFKN-VNINVAVQTENGLYVPVVKDADKKGLSTIGE 430
Query: 395 KWRGLLKKARMKQLQPDEYSSGTFTLSNL-GMFGVDRFDAILPPGQGAIMAVGGSRPTLV 453
+ R L +KA+ L+P++Y GTFT+SNL G FG+ +F A++ P Q AI+A+G + +V
Sbjct: 431 EVRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVV 490
Query: 454 -ANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
+++ + M V ++ DHR+I GA A +L+ F IE PES+ L
Sbjct: 491 PGTGPDQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL 539
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 54 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 113
EI MP+LS TMTEG I W EGD+VA G+ + VE+DKA +++E +G +A ++
Sbjct: 113 EIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKEE 172
Query: 114 G 114
G
Sbjct: 173 G 173
>AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714
Length = 713
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 9/227 (3%)
Query: 284 PFTTMQAAVSRNMMES-LSVPTFRVGYAVCTDKLDALCEKVKSK---GVTKTLLLVKAAA 339
P + ++ +++ ++ES +P + V D L A ++++ V+ +++KA A
Sbjct: 487 PNSQIRKIIAKRLLESKQKIPHLYLQSDVVLDPLLAFRKELQENHGVKVSVNDIVIKAVA 546
Query: 340 MALTQHPVVNASCRDGK-SFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQKWRG 398
+AL NA K S++I++AVA E GL+TP++++ D+ + ++ + +
Sbjct: 547 VALRNVRQANAFWDAEKGDIVMCDSVDISIAVATEKGLMTPIIKNADQKSISAISLEVKE 606
Query: 399 LLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRPTL--VANK 456
L +KAR +L P E+ GTF++SNLGM+ VD F AI+ P Q I+AVG + V
Sbjct: 607 LAQKARSGKLAPHEFQGGTFSISNLGMYPVDNFCAIINPPQAGILAVGRGNKVVEPVIGL 666
Query: 457 DGFF--SIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
DG S+ +M V ++ADHRI G A+F+ ED L L
Sbjct: 667 DGIEKPSVVTKMNVTLSADHRIFDGQVGASFMSELRSNFEDVRRLLL 713
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 57 MPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPAG-E 115
MPALS TM +G I W EGD++ GD + +E+DKA ++ E+ +G +A +L+P G +
Sbjct: 293 MPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSK 352
Query: 116 SAPVGAPI 123
VG PI
Sbjct: 353 DVAVGKPI 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 57 MPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPAG-E 115
MPALS TM+ G +V W EGD+V GD + +E+DKA ++ E+ +G +A +LV G +
Sbjct: 166 MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSK 225
Query: 116 SAPVGAPI 123
PV PI
Sbjct: 226 DIPVNEPI 233
>AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484
Length = 483
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 9/227 (3%)
Query: 283 VPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTL------LLVK 336
VP A+ + M + SVP F + D L L + K T+ L+K
Sbjct: 255 VPLRGFSRAMVKTMTMATSVPHFHFVEEINCDSLVELKQFFKENNTDSTIKHTFLPTLIK 314
Query: 337 AAAMALTQHPVVNASCRDGKSFS--YNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLLAQ 394
+ +MALT++P VN SC + +S S NI VA+A E GL+ P +++V L + + +
Sbjct: 315 SLSMALTKYPFVN-SCFNAESLEIILKGSHNIGVAMATEHGLVVPNIKNVQSLSLLEITK 373
Query: 395 KWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRPTLVA 454
+ L A +L P++ + GT TLSN+G G +L + AI+A+G
Sbjct: 374 ELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGKFGSPLLNLPEVAIIALGRIEKVPKF 433
Query: 455 NKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 501
+K+G + M+VN+ ADHR++ GA +A F + + +E PE L L
Sbjct: 434 SKEGTVYPASIMMVNIAADHRVLDGATVARFCCQWKEYVEKPELLML 480
>AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465
Length = 464
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 317 DALCEKVKSKGVTKTLL--LVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEG 374
DA EK GV L+ +KAA AL PVVNA DG Y ++I++AV
Sbjct: 281 DAFLEK---HGVKLGLMSGFIKAAVSALQHQPVVNAVI-DGDDIIYRDYVDISIAVGTSK 336
Query: 375 GLLTPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAI 434
GL+ PV+ D DK++ + + GL KKA + DE + G+FT+SN G++G I
Sbjct: 337 GLVVPVIRDADKMNFADIEKTINGLAKKATEGTISIDEMAGGSFTVSNGGVYGSLISTPI 396
Query: 435 LPPGQGAIMAVGG--SRPTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKI 492
+ P Q AI+ + RP +V G + M V +T DHR+I G + FL+ +
Sbjct: 397 INPPQSAILGMHSIVQRPMVVG---GSVVPRPMMYVALTYDHRLIDGREAVYFLRRIKDV 453
Query: 493 IEDPESLTL 501
+EDP+ L L
Sbjct: 454 VEDPQRLLL 462
>AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465
Length = 464
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 11/189 (5%)
Query: 317 DALCEKVKSKGVTKTLL--LVKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEG 374
DA EK GV L+ +KAA AL PVVNA DG Y ++I++AV
Sbjct: 281 DAFYEK---HGVKLGLMSGFIKAAVSALQHQPVVNAVI-DGDDIIYRDYVDISIAVGTSK 336
Query: 375 GLLTPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAI 434
GL+ PV+ DK++ + + L KKA + DE + G+FT+SN G++G I
Sbjct: 337 GLVVPVIRGADKMNFAEIEKTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPI 396
Query: 435 LPPGQGAIMAVGG--SRPTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKI 492
+ P Q AI+ + SRP +V G + M V +T DHR+I G + FL+ +
Sbjct: 397 INPPQSAILGMHSIVSRPMVVG---GSVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDV 453
Query: 493 IEDPESLTL 501
+EDP+ L L
Sbjct: 454 VEDPQRLLL 462
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,176,110
Number of extensions: 242434
Number of successful extensions: 594
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 580
Number of HSP's successfully gapped: 15
Length of query: 501
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,282,721
Effective search space: 3296522958
Effective search space used: 3296522958
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)