BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0394200 Os04g0394200|AK068154
(440 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465 579 e-166
AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465 579 e-165
AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714 135 5e-32
AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540 124 8e-29
AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540 120 2e-27
AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484 99 3e-21
AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481 94 1e-19
AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466 86 5e-17
>AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465
Length = 464
Score = 579 bits (1493), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/391 (74%), Positives = 324/391 (82%), Gaps = 6/391 (1%)
Query: 55 NASPYQLWSRSFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDK 114
+ Q W R F+SD+GD VEAVVP MGES+TDGTLA FLKKPGDRVEADE IAQIETDK
Sbjct: 75 QGTALQRWVRPFSSDSGDVVEAVVPHMGESITDGTLAAFLKKPGDRVEADEAIAQIETDK 134
Query: 115 VTIDVASPEAGVIEKFIASEGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAE 174
VTID+ASP +GVI++F+ EGDTV PG KVA IS SA A +HVAPSE + K P +
Sbjct: 135 VTIDIASPASGVIQEFLVKEGDTVEPGNKVARISTSA-DAVSHVAPSEKAPEKPAPKPSP 193
Query: 175 ET-KPKLEE----KSXXXXXXXXXXXXXXXXTEPQLPPKERERRVPMPRLRKRIANRLKD 229
KPK+E + EPQLPPK+RERRVPM RLRKR+A RLKD
Sbjct: 194 PAEKPKVESTKVAEKPKAPSPPPPPPSKQSAKEPQLPPKDRERRVPMTRLRKRVATRLKD 253
Query: 230 SQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNA 289
SQNTFA+LTTFNEVDMTNLMKLRS YKD F+ KHGVKLGLMS F+KAAV+ALQ+QP+VNA
Sbjct: 254 SQNTFALLTTFNEVDMTNLMKLRSQYKDAFLEKHGVKLGLMSGFIKAAVSALQHQPVVNA 313
Query: 290 VIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSID 349
VIDGDDIIYRDYVDIS+AVGTSKGLVVPVIRDAD MNFADIEK IN LAKKATEG +SID
Sbjct: 314 VIDGDDIIYRDYVDISIAVGTSKGLVVPVIRDADKMNFADIEKTINGLAKKATEGTISID 373
Query: 350 EMAGGTFTISNGGVYGSLISTPIINPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTY 409
EMAGG+FT+SNGGVYGSLISTPIINPPQSAILGMHSIVQRP+VV G+++ RPMMY+ALTY
Sbjct: 374 EMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVQRPMVVGGSVVPRPMMYVALTY 433
Query: 410 DHRLIDGREAVYFLRRIKDVVEDPRRLLLDI 440
DHRLIDGREAVYFLRRIKDVVEDP+RLLLDI
Sbjct: 434 DHRLIDGREAVYFLRRIKDVVEDPQRLLLDI 464
>AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465
Length = 464
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/426 (68%), Positives = 341/426 (80%), Gaps = 12/426 (2%)
Query: 22 SYSHARNYSSQLSAL-IPIGSQSSKLTRRRYYLPNASPYQLWSRSFASDNGDQVEAVVPF 80
+Y H N++ L +P G+ S ++R + +S Q W R F+++ GD VEAVVP
Sbjct: 44 AYLHRGNHAHSFHNLALPAGN--SGISRSASLV--SSTLQRWVRPFSAETGDTVEAVVPH 99
Query: 81 MGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEGDTVTP 140
MGES+TDGTLA FLKKPG+RV+ADE IAQIETDKVTID+ASP +GVI++F+ +EGDTV P
Sbjct: 100 MGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNEGDTVEP 159
Query: 141 GTKVAIISKSAAPAETHVAPS----EDSTPKETPPKAEETKPKLEEK--SXXXXXXXXXX 194
GTKVAIISKS A + V PS E + K +PP ++ KP++E +
Sbjct: 160 GTKVAIISKSEDTA-SQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPP 218
Query: 195 XXXXXXTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSD 254
EPQLPPKERERRVPM RLRKR+A RLKDSQNTFA+LTTFNEVDMTNLMKLRS
Sbjct: 219 PPKQSAKEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQ 278
Query: 255 YKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGL 314
YKD F KHGVKLGLMS F+KAAV+ALQ+QP+VNAVIDGDDIIYRDYVDIS+AVGTSKGL
Sbjct: 279 YKDAFYEKHGVKLGLMSGFIKAAVSALQHQPVVNAVIDGDDIIYRDYVDISIAVGTSKGL 338
Query: 315 VVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIIN 374
VVPVIR AD MNFA+IEK IN+LAKKA EG +SIDEMAGG+FT+SNGGVYGSLISTPIIN
Sbjct: 339 VVPVIRGADKMNFAEIEKTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPIIN 398
Query: 375 PPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPR 434
PPQSAILGMHSIV RP+VV G+++ RPMMY+ALTYDHRLIDGREAVYFLRR+KDVVEDP+
Sbjct: 399 PPQSAILGMHSIVSRPMVVGGSVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVEDPQ 458
Query: 435 RLLLDI 440
RLLLDI
Sbjct: 459 RLLLDI 464
>AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714
Length = 713
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 215 PMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFV 274
P ++RK IA RL +S+ L ++V + L+ R + ++ HGVK+ + +
Sbjct: 487 PNSQIRKIIAKRLLESKQKIPHLYLQSDVVLDPLLAFRKELQE----NHGVKVSVNDIVI 542
Query: 275 KAAVTALQNQPIVNAVIDGD--DIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEK 332
KA AL+N NA D + DI+ D VDIS+AV T KGL+ P+I++AD + + I
Sbjct: 543 KAVAVALRNVRQANAFWDAEKGDIVMCDSVDISIAVATEKGLMTPIIKNADQKSISAISL 602
Query: 333 GINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAIL--GMHSIVQRP 390
+ LA+KA G L+ E GGTF+ISN G+Y IINPPQ+ IL G + V P
Sbjct: 603 EVKELAQKARSGKLAPHEFQGGTFSISNLGMYPVDNFCAIINPPQAGILAVGRGNKVVEP 662
Query: 391 VV-VDGNILARP----MMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
V+ +DG + +P M + L+ DHR+ DG+ F+ ++ ED RRLLL
Sbjct: 663 VIGLDG--IEKPSVVTKMNVTLSADHRIFDGQVGASFMSELRSNFEDVRRLLL 713
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 67 ASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGV 126
ASD V +P + ++ G +A + KK GD++E + I +IETDK T++ S E G
Sbjct: 282 ASDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGY 341
Query: 127 IEKFIASEGDT-VTPGTKVAIISKSAAPAE----THVAPSEDSTPKETP 170
+ K + EG V G +A+I + A E + SE T KE P
Sbjct: 342 LAKILIPEGSKDVAVGKPIALIVEDAESIEAIKSSSAGSSEVDTVKEVP 390
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 59 YQLWSRSFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTID 118
Y LW S Q +P + +++ G + ++KK GD+VE + + +IETDK T++
Sbjct: 151 YFLWVVGPIS----QTVLAMPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVE 206
Query: 119 VASPEAGVIEKFIASEGDTVTP 140
S E G + K + +EG P
Sbjct: 207 FESQEEGFLAKILVTEGSKDIP 228
>AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540
Length = 539
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 214 VPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCF 273
+P ++RK A+RL S+ T + + LM LRS G ++ +
Sbjct: 312 IPHSQIRKVTASRLAFSKQTIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLV 371
Query: 274 VKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKG 333
VKAA AL+ P N+ D I V+I+VAV T GL VPV++DAD + I +
Sbjct: 372 VKAAALALRKVPQCNSSWTDDYIRQFKNVNINVAVQTENGLYVPVVKDADRKGLSTIGEE 431
Query: 334 INALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQSAILGMHSIVQRPVV 392
+ LA+KA E +L ++ GGTFT+SN GG +G ++NPPQ+AIL + S +R V
Sbjct: 432 VRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKR--V 489
Query: 393 VDGN----ILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
V GN M + L+ DHR++DG +L+ K +E+P+ +LL
Sbjct: 490 VPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 65 SFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEA 124
S SD E +P + ++T+G +A +LKK GD+V E + ++ETDK T+++ E
Sbjct: 103 SSGSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 125 GVIEKFIASEGDT-VTPGTKVAIIS---------KSAAPAETHVAPSEDSTPKETPPKAE 174
G + K + +EG + G +AI K P+ T A + P PPK E
Sbjct: 163 GYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEE 222
Query: 175 ETK 177
+ K
Sbjct: 223 KVK 225
>AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540
Length = 539
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 214 VPMPRLRKRIANRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCF 273
+P ++RK A+RL S+ T + + +M LRS G ++ +
Sbjct: 312 IPHTQIRKVTASRLAFSKQTIPHYYLTVDTCVDKMMGLRSQLNSFQEASGGKRISVNDLV 371
Query: 274 VKAAVTALQNQPIVNAVIDGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKG 333
+KAA AL+ P N+ + I V+I+VAV T GL VPV++DAD + I +
Sbjct: 372 IKAAALALRKVPQCNSSWTDEYIRQFKNVNINVAVQTENGLYVPVVKDADKKGLSTIGEE 431
Query: 334 INALAKKATEGALSIDEMAGGTFTISN-GGVYGSLISTPIINPPQSAILGMHSIVQRPVV 392
+ LA+KA E +L ++ GGTFT+SN GG +G +INPPQ+AIL + S +R V
Sbjct: 432 VRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVP 491
Query: 393 VDG----NILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
G N+ + M + L+ DHR+IDG +L+ K +E P +LL
Sbjct: 492 GTGPDQYNVAS--YMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL 539
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 65 SFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEA 124
S +SD E +P + ++T+G +A +LKK GD+V E + ++ETDK T+++ E
Sbjct: 103 SSSSDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 125 GVIEKFIASEG 135
G + K + EG
Sbjct: 163 GFLAKIVKEEG 173
>AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484
Length = 483
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 242 EVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGD--DIIYR 299
E++ +L++L+ +K E T +K + +K+ AL P VN+ + + +II +
Sbjct: 282 EINCDSLVELKQFFK-ENNTDSTIKHTFLPTLIKSLSMALTKYPFVNSCFNAESLEIILK 340
Query: 300 DYVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTIS 359
+I VA+ T GLVVP I++ +++ +I K ++ L A L+ +++ GGT T+S
Sbjct: 341 GSHNIGVAMATEHGLVVPNIKNVQSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLS 400
Query: 360 NGGVYGSLISTPIINPPQSAILGMHSIVQRP-VVVDGNILARPMMYLALTYDHRLIDGRE 418
N G G +P++N P+ AI+ + I + P +G + +M + + DHR++DG
Sbjct: 401 NIGAIGGKFGSPLLNLPEVAIIALGRIEKVPKFSKEGTVYPASIMMVNIAADHRVLDGAT 460
Query: 419 AVYFLRRIKDVVEDPRRLLLDI 440
F + K+ VE P L+L +
Sbjct: 461 VARFCCQWKEYVEKPELLMLQM 482
>AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481
Length = 480
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 269 LMSCFVKAAVTALQNQPIVNAVI-DGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNF 327
+ + KAA AL P+VNA DG Y ++I+VAV + GL+ PV++DAD ++
Sbjct: 309 MTALLAKAAGMALAQHPVVNASCKDGKSFSYNSSINIAVAVAINGGLITPVLQDADKLDL 368
Query: 328 ADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAILGMHSIV 387
+ + L KA L E GTFT+SN G++G I+ P Q AI+ + +
Sbjct: 369 YLLSQKWKELVGKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGA-- 426
Query: 388 QRPVVV---DGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLL 438
+P VV DG + M + +T DHR++ G + FL+ ++E+P L L
Sbjct: 427 SKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 480
>AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466
Length = 465
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 284 QPIVNAVI-DGDDIIYRDYVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKAT 342
P+VN+ DG+ +Y ++++VAV GL+ PV+++AD ++ + + L KA
Sbjct: 309 HPVVNSSCRDGNSFVYNSSINVAVAVAIDGGLITPVLQNADKVDIYSLSRKWKELVDKAR 368
Query: 343 EGALSIDEMAGGTFTISNGGVYGSLISTPIINPPQSAILGMHSIVQRPVVV---DGNILA 399
L E GTFT+SN G++G I+ P AI+ + + +P VV DG I
Sbjct: 369 AKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGA--SQPSVVATKDGRIGM 426
Query: 400 RPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRL 436
+ M + +T DHR+I G + FL+ + ++EDP+ L
Sbjct: 427 KNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDL 463
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,893,004
Number of extensions: 368565
Number of successful extensions: 1179
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1164
Number of HSP's successfully gapped: 14
Length of query: 440
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 338
Effective length of database: 8,310,137
Effective search space: 2808826306
Effective search space used: 2808826306
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)