BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0399500 Os08g0399500|Os08g0399500
(705 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0399500 SRA-YDG domain containing protein 1236 0.0
Os08g0399300 1010 0.0
Os08g0400000 Similar to Puromycin-sensitive aminopeptidase ... 441 e-124
Os08g0400200 SRA-YDG domain containing protein 382 e-106
Os09g0362900 SRA-YDG domain containing protein 185 1e-46
Os01g0927000 Similar to SET domain-containing protein SET118 87 3e-17
Os05g0490700 Similar to SET domain protein SDG111 84 3e-16
Os07g0435900 SRA-YDG domain containing protein 84 3e-16
Os01g0811300 Similar to SET domain protein SDG111 84 5e-16
>Os08g0399500 SRA-YDG domain containing protein
Length = 705
Score = 1236 bits (3197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/705 (87%), Positives = 620/705 (87%)
Query: 1 MRGRGGEEGTWKSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MRGRGGEEGTWKSH
Sbjct: 1 MRGRGGEEGTWKSHGGGGRGAERAGAVVAPPRAADAAGTGTGTGRNAVAVNGGAAEDVVV 60
Query: 61 IASGRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPPRPVAADGRGGSGEGTSRA 120
IASGRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPPRPVAADGRGGSGEGTSRA
Sbjct: 61 IASGRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPPRPVAADGRGGSGEGTSRA 120
Query: 121 RGRGEEGMTQVAVAGGLATLTHGGERDPGAAVATEEKRNGGEVGTKKGLEEXXXXXXXXX 180
RGRGEEGMTQVAVAGGLATLTHGGERDPGAAVATEEKRNGGEVGTKKGLEE
Sbjct: 121 RGRGEEGMTQVAVAGGLATLTHGGERDPGAAVATEEKRNGGEVGTKKGLEERAARSPPPL 180
Query: 181 XXXXXXXVSAVRQFPPGCGRDAAVPLGRRHGRGRNADGGVRPLDQATAPPLAGSKTDLPL 240
VSAVRQFPPGCGRDAAVPLGRRHGRGRNADGGVRPLDQATAPPLAGSKTDLPL
Sbjct: 181 PPPKRRAVSAVRQFPPGCGRDAAVPLGRRHGRGRNADGGVRPLDQATAPPLAGSKTDLPL 240
Query: 241 EAVVDGGDPIANVAHKLGSLKNGVQEGAANSGELLGRKQVMAQAANVLPKRRMVPVTRCF 300
EAVVDGGDPIANVAHKLGSLKNGVQEGAANSGELLGRKQVMAQAANVLPKRRMVPVTRCF
Sbjct: 241 EAVVDGGDPIANVAHKLGSLKNGVQEGAANSGELLGRKQVMAQAANVLPKRRMVPVTRCF 300
Query: 301 PPGCGRDVKTGSGLEFMAVDASCGGVSKEVVASDGGDSLVSQXXXXXXXXXXAYSDVDSQ 360
PPGCGRDVKTGSGLEFMAVDASCGGVSKEVVASDGGDSLVSQ AYSDVDSQ
Sbjct: 301 PPGCGRDVKTGSGLEFMAVDASCGGVSKEVVASDGGDSLVSQELEEGEVAEEAYSDVDSQ 360
Query: 361 NVAVDDSMAAATEDVKVMNKCKGTLPRAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNV 420
NVAVDDSMAAATEDVKVMNKCKGTLPRAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNV
Sbjct: 361 NVAVDDSMAAATEDVKVMNKCKGTLPRAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNV 420
Query: 421 ATEVFGDCMMRSKIPLIARKAVKSPLNILHRRPFSKGKEECVVTNSAPCGPKKKLKVKGA 480
ATEVFGDCMMRSKIPLIARKAVKSPLNILHRRPFSKGKEECVVTNSAPCGPKKKLKVKGA
Sbjct: 421 ATEVFGDCMMRSKIPLIARKAVKSPLNILHRRPFSKGKEECVVTNSAPCGPKKKLKVKGA 480
Query: 481 YQTKDIPIKIVSTPGLGGKDNLVDKEALILEDDDILKALAVHDGTLKLYLNAXXXXXXXX 540
YQTKDIPIKIVSTPGLGGKDNLVDKEALILEDDDILKALAVHDGTLKLYLNA
Sbjct: 481 YQTKDIPIKIVSTPGLGGKDNLVDKEALILEDDDILKALAVHDGTLKLYLNASSSVQHHG 540
Query: 541 XXXXXNADDRRKTMMLCRRFQFIRQALVQAVKQGSLKGGIDTADHNGVLVAISIVASGGY 600
NADDRRKTMMLCRRFQFIRQALVQAVKQGSLKGGIDTADHNGVLVAISIVASGGY
Sbjct: 541 QHGSGNADDRRKTMMLCRRFQFIRQALVQAVKQGSLKGGIDTADHNGVLVAISIVASGGY 600
Query: 601 PDRLSSSGELIYTGSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKD 660
PDRLSSSGELIYTGSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKD
Sbjct: 601 PDRLSSSGELIYTGSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKD 660
Query: 661 DSYSRAKQISAFTYDGLYHVVDYWREGLKGSMVFKYRLQRIHAYR 705
DSYSRAKQISAFTYDGLYHVVDYWREGLKGSMVFKYRLQRIHAYR
Sbjct: 661 DSYSRAKQISAFTYDGLYHVVDYWREGLKGSMVFKYRLQRIHAYR 705
>Os08g0399300
Length = 908
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/732 (75%), Positives = 569/732 (77%), Gaps = 98/732 (13%)
Query: 61 IASGRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPPR----PVAADGRGGSGEG 116
I SGRRSVGEPTLDVSEMLLQAA+ WRSRRTQREARPDALPPR PVAADGRGGSGEG
Sbjct: 188 IVSGRRSVGEPTLDVSEMLLQAAQAWRSRRTQREARPDALPPRHPPRPVAADGRGGSGEG 247
Query: 117 TSRARGRGEEGMTQ--------------VAVAGGLATLTHGGERDPGAAVATEEKRNGGE 162
TSRARGRGEEG + VAVAGGLATLTHGGERD GAAVATEEKRNGGE
Sbjct: 248 TSRARGRGEEGTARGGDGEMMALVRTVDVAVAGGLATLTHGGERDAGAAVATEEKRNGGE 307
Query: 163 VGTKKGLEEXXXXXXXXXXXXXXXXVSAVRQFPPGCGRDAAVPLGRRHGRGRNADGGVRP 222
VGTK+G+EE VS+VRQ PPGCGRDAA+PLGRRHGRGR+ DGGV
Sbjct: 308 VGTKRGMEERAARSPPPPKRSA---VSSVRQLPPGCGRDAALPLGRRHGRGRDGDGGV-- 362
Query: 223 LDQATAPPLAGSKTDLPLEAVVDGGDPIANV----------------AHKLGSLKNGVQE 266
PPLAG++TDLPLEAVVDGGDPIANV A K+GSL++ VQE
Sbjct: 363 ------PPLAGNRTDLPLEAVVDGGDPIANVHQIFSKSSHATDENQVACKVGSLEDVVQE 416
Query: 267 GAANSGELLGRKQVMAQAANVLPKRRMVPVTRCFPPGCGRDVKTGSGLEFMAVDASCGGV 326
GAANSGELLG KQV+AQAANVLPKRRMV TR FPPGCGRDVKTGSGLEFMAVDASCGGV
Sbjct: 417 GAANSGELLGWKQVLAQAANVLPKRRMVSATRRFPPGCGRDVKTGSGLEFMAVDASCGGV 476
Query: 327 SKEVVASDGGDSLVSQXXXXXXXXXXAYSDVDSQNVAVDDSMAAATEDVKVMNKCKGTLP 386
SKEVVASDGGDSLVSQ AYSDVDSQNVAVDDSMAAATEDVKVMNKCKGTLP
Sbjct: 477 SKEVVASDGGDSLVSQELEEGEVADEAYSDVDSQNVAVDDSMAAATEDVKVMNKCKGTLP 536
Query: 387 RAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNVATEVFGDCMMRSKIPLIARKAVKSPL 446
RAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNVATEVFGD MMRSKI L ARKAVKSPL
Sbjct: 537 RAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNVATEVFGDGMMRSKILLTARKAVKSPL 596
Query: 447 NILHRRPFSKGKEECVVTNSAPCGPKKKLKVKGAYQTKDIPIKIVSTPGLGGKDNLVDKE 506
N LHR PFSKGKEEC VTNSAP GPKKK KVKGAYQTKDIPIKIVSTPGLGGKDNLVDKE
Sbjct: 597 NTLHRWPFSKGKEECAVTNSAPFGPKKKFKVKGAYQTKDIPIKIVSTPGLGGKDNLVDKE 656
Query: 507 ALILEDDDILKALAVHDGTLKLYLNAXXXXXXXXXXXXXNADDRRKTMMLCRRFQFIRQA 566
ALILEDDDILKALAVHDG LKLYLNA NA+DRRKTMMLCRRFQFI +A
Sbjct: 657 ALILEDDDILKALAVHDGKLKLYLNASSSVQRHGQHGSGNANDRRKTMMLCRRFQFIHRA 716
Query: 567 LVQAVKQGSLK------------------------------------------------- 577
LV AVKQGSLK
Sbjct: 717 LVHAVKQGSLKVLRADLEADKIVRKLPGFIKPGPIVGNVRGVEVGDEFLYRVELALVGLH 776
Query: 578 ----GGIDTADHNGVLVAISIVASGGYPDRLSSSGELIYTGSGGQPTGKKKSEDQKLERG 633
GGIDT DHNGVLVAISIVASGGYPDRLSSSGELIYTGSGGQP GKKK EDQKLERG
Sbjct: 777 RPYQGGIDTTDHNGVLVAISIVASGGYPDRLSSSGELIYTGSGGQPAGKKKGEDQKLERG 836
Query: 634 NLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDGLYHVVDYWREGLKGSMV 693
NLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDGLY VVDYWREGLKGSMV
Sbjct: 837 NLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDGLYRVVDYWREGLKGSMV 896
Query: 694 FKYRLQRIHAYR 705
FKYRLQRIHA R
Sbjct: 897 FKYRLQRIHAGR 908
>Os08g0400000 Similar to Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)
Length = 927
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/404 (60%), Positives = 276/404 (68%), Gaps = 57/404 (14%)
Query: 354 YSDVDSQNVAVDDSM---AAATEDVKVMNKCKGTLPRAAAEPCAEGPSKEHFKGTRECEN 410
+S V + N + + +AA + VKVMNKCKGT +AAAEP AEGPSKEHFK RECE
Sbjct: 502 FSSVKNGNTSQHEETIYASAAADVVKVMNKCKGTKSKAAAEPWAEGPSKEHFKAKRECEK 561
Query: 411 DRMGKSSMNVATEVFGDCMMRSKIPLIARKAVKSPLNILHRRPFSKGKEECVVTNSAPCG 470
D M KSSMNV TEVF D +MR+K+ L ARKAVK PLN LH PFS GKEE VVTNSA G
Sbjct: 562 DGMKKSSMNVPTEVFRDGIMRTKLLLTARKAVKPPLNTLHI-PFSMGKEESVVTNSASFG 620
Query: 471 PKKKLKVKGAYQTKDIPIKIVSTPGLGGKDNLVDKEALILEDDDILKALAVHDGTLKLYL 530
PKKK+KVK +++K IP+KIVST GL GKDNL++++AL LEDDDILKALAVH+G L+LYL
Sbjct: 621 PKKKVKVKSPHESKGIPMKIVSTSGLAGKDNLINEKALSLEDDDILKALAVHNGKLELYL 680
Query: 531 NAXXXXXXXXXXXXXNADDRRKTMMLCRRFQFIRQALVQAVKQGSL-------------- 576
N N +DR K MLCRRFQFI AL+ AV+QGSL
Sbjct: 681 NVPSCVERHRQHGSENGNDRSKIRMLCRRFQFICNALLHAVEQGSLMVRRIDLEADKIIR 740
Query: 577 ---------------------------------------KGGIDTADHNGVLVAISIVAS 597
+GGIDT DHNGVLVAISIVAS
Sbjct: 741 KLPGFTKHGPTVGNVRGVEVGDEFLYRVELALVGLHRPYQGGIDTTDHNGVLVAISIVAS 800
Query: 598 GGYPDRLSSSGELIYTGSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQN 657
GGYPD LSSSGELIYTGSGG+P GK+K EDQKL RGNLALKNCIKTKTPVRVIHGFKGQN
Sbjct: 801 GGYPDELSSSGELIYTGSGGKPAGKEKHEDQKLGRGNLALKNCIKTKTPVRVIHGFKGQN 860
Query: 658 GKDDSYSRAKQISAFTYDGLYHVVDYWREGLKGSMVFKYRLQRI 701
+D S+SRAKQI FTYDGLY V+D WREGLKGS V KY+LQ+I
Sbjct: 861 REDVSHSRAKQILTFTYDGLYLVLDCWREGLKGSRVLKYKLQKI 904
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 186/357 (52%), Gaps = 94/357 (26%)
Query: 111 GGSGEGTSRARGRGEEGMTQ------------------------VAVAGGLATLTHGGER 146
G GEGTSR RGRGE+G T VAVAGGLAT G ER
Sbjct: 40 GWRGEGTSRVRGRGEKGTTHGGAEGEGAVVAPVRTADAVPARNAVAVAGGLAT--RGVER 97
Query: 147 DPGAAVATEEKRNGGEVGTKKGLEEXXXXXXXXXXXXXXXXVSAVRQFPPGCGRDAAVPL 206
D G VA EEKR+GGE+GTK+GLEE VSA+RQFPPGCGRDAA P+
Sbjct: 98 DAGQVVAREEKRHGGELGTKRGLEERAARSPPPPPPPKRRAVSAIRQFPPGCGRDAAAPV 157
Query: 207 GRRHGRGRNADGGVRPLDQATAPPLAGSKTDLPLEAVV------DGGDPIA--------- 251
R GR DGGVR LD+ATA PLAGSK D + VV DGGD +A
Sbjct: 158 AR----GRGCDGGVRLLDEATAAPLAGSKDDSAVPGVVEKVASVDGGDSMANAHHHHHAM 213
Query: 252 ---------------NVAHKLGSLKNGVQEGAA-----NSGELLGRKQVMAQAANVLPKR 291
VA K+GSL+NG EG+A + GELLGRK+V+AQAAN+LPKR
Sbjct: 214 MDTVLMKSSHVSDENQVARKVGSLENGA-EGSARGKGGHGGELLGRKEVLAQAANLLPKR 272
Query: 292 RMVPVTRCFPPGCGRDV----------KTGSGLEFMAVDASCGGVSKEVVASDGGDSLVS 341
R+V TR FPPGCGRD K GS LE M VDA GVSKEVV +DG ++ V+
Sbjct: 273 RIVSATRRFPPGCGRDAVAPLAHREESKVGSSLEAMPVDAGW-GVSKEVVTTDGRNNSVN 331
Query: 342 QXXXXX------------XXXXXAYSDVDSQNVA-----VDDSMAAATEDVKVMNKC 381
Q A DV+SQ VA ++ ++ + +V+ +C
Sbjct: 332 QCASNIVGTVKCQELEEGEVAAEACCDVESQKVAGHGEKLESAVPVTSAVTEVLTRC 388
>Os08g0400200 SRA-YDG domain containing protein
Length = 1292
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/394 (56%), Positives = 245/394 (62%), Gaps = 95/394 (24%)
Query: 369 AAATEDVKVMNKCKGTLPRAAAEPCAEGPSKEHFKGTRECENDRMGKSSMNVATEVFGDC 428
+AA EDVKVMNK KGTLP+ AA KSSMN+AT VFGD
Sbjct: 625 SAAAEDVKVMNKYKGTLPKGAA------------------------KSSMNIATGVFGDG 660
Query: 429 MMRSKIPLIARKAVKSP--------LNILHRRPFSKGKEECVVTNSAPCGPKKKLKVKGA 480
+MRSKI ARK VK P LN LHR PFS TNSA G KKLKVK
Sbjct: 661 IMRSKILSTARKVVKPPVRASHKPPLNTLHR-PFS--------TNSASFG-HKKLKVKRP 710
Query: 481 YQTKDIPIKIVSTPGLGGKDNLVDKEALILEDDDILKALAVHDGTLKLYLNAXXXXXXXX 540
Q+KDIP+KI ST GL GKDNL+D++AL LEDDDILKAL VHDG L++YLN
Sbjct: 711 DQSKDIPMKIASTSGLAGKDNLIDEKALSLEDDDILKALVVHDGKLEVYLNVPSCVQLHR 770
Query: 541 XXXXXNADDRRKTMMLCRRFQFIRQALVQAVKQGSLK----------------------- 577
NADDR K MLCRRFQFI +AL+ AV+QGSLK
Sbjct: 771 QHGSGNADDRSKIRMLCRRFQFICRALLHAVEQGSLKIRRVDLAADKIIRKLPGFTKPGP 830
Query: 578 ------------------------------GGIDTADHNGVLVAISIVASGGYPDRLSSS 607
GGIDT D+NGVLVAISIV SGGYPD LSSS
Sbjct: 831 TVGNVNGVEVGDEFMYRVELALVGLHRPYQGGIDTTDYNGVLVAISIVCSGGYPDELSSS 890
Query: 608 GELIYTGSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAK 667
GELIYTGSGG+P GKKK EDQKLERGNLALKNCI+TKTPVRVIHGFKGQN +D+S+SRAK
Sbjct: 891 GELIYTGSGGKPAGKKKDEDQKLERGNLALKNCIETKTPVRVIHGFKGQNREDNSHSRAK 950
Query: 668 QISAFTYDGLYHVVDYWREGLKGSMVFKYRLQRI 701
QI FTYDGLY VVD W EGLKGS +FKY+LQRI
Sbjct: 951 QILTFTYDGLYLVVDCWTEGLKGSRIFKYKLQRI 984
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 190/381 (49%), Gaps = 96/381 (25%)
Query: 64 GRRSVGEPTLDVSEMLLQAAETWRSRRTQREARPDALPPRPVAADGRGGSGEGTSRARGR 123
GRRS+ PTL++SEM+L AA+ WRSR TQR+ RP A+PPRPVAADGR GEGTS RGR
Sbjct: 116 GRRSMDGPTLELSEMMLHAAQPWRSRCTQRDVRPGAVPPRPVAADGR---GEGTSTVRGR 172
Query: 124 ---------------------GEEGMTQVAVAGGLATLTHGGERDPGAAVATEEKRNGGE 162
VAVAG LA THGGER G VA E++ GGE
Sbjct: 173 VLEGTTRGGGRGGGMEREREVVAPARNAVAVAGDLA--THGGERVAGPLVAKEKRNGGGE 230
Query: 163 VGTKKGLEEXXXXXXXXXXXXXXXXVSAVRQFPPGCGRDAAVPLGRRHGRGRNADGGVRP 222
+GTK+GLE+ VSA RQFPP GRD+AVPLGR R GGVRP
Sbjct: 231 LGTKRGLEK-----RAPLPPPKRRVVSAKRQFPPDFGRDSAVPLGRG----RGRGGGVRP 281
Query: 223 LDQATAPPLAGSKTDLPLEAVVDGGDPIANVAH----------------------KLGSL 260
D A A + G K A GD +ANV H K+GS
Sbjct: 282 SDGAPARAVLGEKV-----ASAGNGDSMANVHHHAVMDTVLMKSSHASDENLVAFKVGSP 336
Query: 261 KNGVQEGA----ANSGELLGRKQVMAQAANVLPKRRMVPVTRCFPPGCGRDV-------- 308
+NG + A A++GELLG+++V+AQA N+LP RR V T F GCGRD
Sbjct: 337 ENGAEGAARGKGAHNGELLGKREVLAQAVNLLPMRRTVSATHRFTAGCGRDAAAPLARRE 396
Query: 309 --KTGSGLEFMAVDASCGGVSKEVVASDGGDSLVSQXXXXX------------------- 347
K GSGLE M VD GGVSKEV+A+DG V+Q
Sbjct: 397 EGKVGSGLEVMPVDVG-GGVSKEVMATDGSKHSVNQCTANIVGAVGVLDGTVQYQELEEG 455
Query: 348 XXXXXAYSDVDSQNVAVDDSM 368
AY DV+SQ V DS
Sbjct: 456 EVADEAYCDVESQKVVGCDSF 476
>Os09g0362900 SRA-YDG domain containing protein
Length = 921
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 105/126 (83%)
Query: 576 LKGGIDTADHNGVLVAISIVASGGYPDRLSSSGELIYTGSGGQPTGKKKSEDQKLERGNL 635
+GGID+ NG+LVAISIVASGGY D LSSS ELIYTGSGG+ G K + DQKLERGNL
Sbjct: 484 YQGGIDSTKVNGILVAISIVASGGYHDELSSSDELIYTGSGGKAIGNKAAGDQKLERGNL 543
Query: 636 ALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDGLYHVVDYWREGLKGSMVFK 695
ALKN I+TKTPVRVIHGFKG + + S+S++KQIS + YDGLY VVDYW+EG +GSMV+K
Sbjct: 544 ALKNSIETKTPVRVIHGFKGHSKGEASHSKSKQISTYIYDGLYMVVDYWKEGPEGSMVYK 603
Query: 696 YRLQRI 701
Y+LQRI
Sbjct: 604 YKLQRI 609
>Os01g0927000 Similar to SET domain-containing protein SET118
Length = 663
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 11/115 (9%)
Query: 590 VAISIVASGGYPDRLSSSGELIYTGSGGQPT--GKKKSEDQKLERGNLALKNCIKTKTPV 647
+A IV SG Y D L + E+IYTG GG ++ Q+L+RGNLALKN P+
Sbjct: 237 LATCIVMSGIYEDDLDKADEIIYTGQGGNDLLGNHRQIGSQQLQRGNLALKNSKDNGNPI 296
Query: 648 RVIHGFKGQNGKDDSYSRAKQISAFTYDGLYHVVDYW-REGLKGSMVFKYRLQRI 701
RVI G +N SY+ +TYDGLY VVD W + G++G +VFKY+L+R+
Sbjct: 297 RVIRGHISKN----SYTG----KVYTYDGLYKVVDDWVQNGVQGHVVFKYKLKRL 343
>Os05g0490700 Similar to SET domain protein SDG111
Length = 672
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
Query: 560 FQFIRQALVQAVKQGSLKGGIDT------ADHNGVLVAISIVASGGYPDRLSSSGELIYT 613
F F + + + S+ GGID +D + V AI IVA+GGY + + L+Y+
Sbjct: 227 FYFRMELCIIGLHAPSM-GGIDYMSAKFGSDEDSV--AICIVAAGGYENVDDDTDTLVYS 283
Query: 614 GSGGQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFT 673
GSGG ++ DQKLERGNLAL+ + K +RV+ GF+ D + +I +
Sbjct: 284 GSGGNSRNSEERHDQKLERGNLALERSLHRKNEIRVVRGFR------DPFCLTGKI--YI 335
Query: 674 YDGLYHVVDYWREGLK-GSMVFKYRLQR 700
YDGLY + + W+E K G FKY+L R
Sbjct: 336 YDGLYKIQESWKERTKSGINCFKYKLLR 363
>Os07g0435900 SRA-YDG domain containing protein
Length = 684
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 562 FIRQALVQAVKQGSLKGGIDTA----DHNGVLVAISIVASGGYPDRLSSSGELIYTGSGG 617
F R L G ++ GID +G +A SI+ SGGY D L+YTG GG
Sbjct: 252 FFRMELCVLGLHGQVQAGIDFVTAGQSSSGEPIATSIIVSGGYEDDDDRGDVLVYTGHGG 311
Query: 618 Q-PTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDG 676
+ P K DQKLE GNLAL+ + +RVI K + R+ + YDG
Sbjct: 312 RDPNLHKHCVDQKLEGGNLALERSMAYGIEIRVIRAVKSK--------RSPVGKVYFYDG 363
Query: 677 LYHVVDYWRE-GLKGSMVFKYRLQRIH 702
LY VVDYW + G G V+KY++ RI
Sbjct: 364 LYKVVDYWLDRGKSGFGVYKYKMLRIE 390
>Os01g0811300 Similar to SET domain protein SDG111
Length = 736
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 560 FQFIRQALVQAVKQGSLKGGIDTADHNGV---LVAISIVASGGYPDRLSSSGELIYTGSG 616
F F + + + S+ GGID + G VAI IVA+G Y + + L+Y+GSG
Sbjct: 291 FYFRMELCIIGLHAPSM-GGIDYMNKFGDEDDSVAICIVAAGVYENDDDDTDTLVYSGSG 349
Query: 617 GQPTGKKKSEDQKLERGNLALKNCIKTKTPVRVIHGFKGQNGKDDSYSRAKQISAFTYDG 676
G ++ +DQKLERGNLAL+ + K +RV+ G+ KD + K + YDG
Sbjct: 350 GISRNSEEKQDQKLERGNLALERSLSRKNVIRVVRGY-----KDPACLTGK---VYIYDG 401
Query: 677 LYHVVDYWREGLK-GSMVFKYRLQR 700
LY + + W+E K G FKY+LQR
Sbjct: 402 LYKIHESWKERTKTGINCFKYKLQR 426
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,587,946
Number of extensions: 1160310
Number of successful extensions: 4246
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4208
Number of HSP's successfully gapped: 14
Length of query: 705
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 597
Effective length of database: 11,396,689
Effective search space: 6803823333
Effective search space used: 6803823333
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 160 (66.2 bits)