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Os01g0811300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to SET domain protein SDG111.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.92 (0.0357) R2 : 0.402
β1 : 1.34 (0.133) R2dD : 0.142 R2D : 0.173
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.87 (0.154) R2dE : 0.207 R2E : 0.234
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.427 (0.0769) R2dN8 : 0.0554 R2N8 : -0.0205
σ : 0.667
deviance : 204.98
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_____
C
peak time of C : --
E
wheather : wind
threshold : 1
memory length : 4322
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.5
open length of G : 1.72

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
197.18 0.66 6.91 1.4 0.204 -2.11 -0.883 -2.67 0.406 19.4 1.016 4326 17 1.9
200.5 0.659 6.91 1.31 0.198 -1.94 -1.04 -- 0.44 19.3 1.013 4323 17.5 1.72
197.4 0.654 6.91 1.43 0.214 -2.14 -- -2.66 0.4 19.6 1 4327 17 1.86
202.83 0.663 6.91 1.33 0.218 -1.97 -- -- 0.428 20.6 1 4324 17.5 1.73
199.79 0.658 6.91 1.42 -- -2.06 -- -2.66 0.388 -- 1.001 4327 17 1.86
267.01 0.766 6.95 1.63 0.0807 -- -1.25 -- 0.3 18.1 -- -- -- --
269.66 0.769 6.95 1.64 0.157 -- -- -- 0.293 22.2 -- -- -- --
204.98 0.667 6.92 1.34 -- -1.87 -- -- 0.427 -- 1 4322 17.5 1.72
248.04 0.734 6.92 -- 0.185 -2.21 -- -- 0.34 20.4 1.005 4322 17.5 1.65
271.16 0.769 6.95 1.64 -- -- -- -- 0.293 -- -- -- -- --
340.17 0.863 6.99 -- 0.168 -- -- -- 0.111 22.9 -- -- -- --
249.79 0.736 6.92 -- -- -2.16 -- -- 0.333 -- 1 4321 17.5 1.63
341.92 0.863 6.99 -- -- -- -- -- 0.112 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 200.49 wind 1.0 4320 > th dose independent rect. 17 2
2 201.66 precipitation 0.1 14400 > th dose dependent rect. 11 6
4 201.89 precipitation 0.1 14400 < th dose independent rect. 12 5
5 201.89 precipitation 0.1 14400 < th dose dependent rect. 12 5
9 201.96 precipitation 0.1 14400 > th dose independent rect. 11 6
18 202.68 precipitation 0.1 14400 > th dose independent rect. 17 1
20 202.70 precipitation 0.1 14400 < th dose independent rect. 17 1
21 202.70 precipitation 0.1 14400 < th dose dependent rect. 17 1
27 204.38 precipitation 0.1 14400 > th dose independent rect. 19 1
29 204.46 precipitation 0.1 14400 < th dose independent rect. 19 1
30 204.46 precipitation 0.1 14400 < th dose dependent rect. 19 1
31 204.87 wind 3.0 43200 < th dose independent rect. 5 3
32 205.10 wind 3.0 43200 < th dose independent rect. 5 1
38 205.35 precipitation 0.1 4320 > th dose dependent rect. 1 16
42 205.42 wind 3.0 43200 > th dose independent rect. 5 3
49 205.77 wind 3.0 43200 > th dose independent rect. 5 1
52 205.85 precipitation 0.1 14400 > th dose dependent rect. 19 1
53 205.92 precipitation 0.1 14400 < th dose independent rect. 3 17
54 205.92 precipitation 0.1 14400 < th dose dependent rect. 3 17
55 206.02 precipitation 0.1 14400 > th dose independent rect. 3 17
67 206.29 precipitation 0.1 4320 < th dose independent rect. 1 16
68 206.29 precipitation 0.1 4320 < th dose dependent rect. 1 16
71 206.50 precipitation 0.1 4320 > th dose independent rect. 1 16
85 206.79 wind 3.0 43200 < th dose independent rect. 1 7
91 207.01 precipitation 0.1 14400 < th dose independent rect. 12 8
92 207.01 precipitation 0.1 14400 < th dose dependent rect. 12 8
97 207.06 precipitation 0.1 14400 > th dose independent rect. 12 8
102 207.16 precipitation 0.1 14400 < th dose independent rect. 9 11
103 207.16 precipitation 0.1 14400 < th dose dependent rect. 9 11
104 207.17 precipitation 0.1 14400 > th dose independent rect. 9 11
108 207.20 wind 1.0 4320 < th dose independent rect. 17 2
132 207.53 wind 1.0 43200 > th dose dependent rect. 5 2
138 207.70 wind 3.0 43200 < th dose dependent rect. 1 6
145 207.77 precipitation 0.1 14400 < th dose independent sin 1 NA
146 207.77 precipitation 0.1 14400 < th dose dependent sin 1 NA
148 207.81 wind 3.0 43200 > th dose independent rect. 1 7
152 207.89 wind 5.0 43200 < th dose dependent rect. 5 2
153 207.90 precipitation 0.1 14400 > th dose independent sin 1 NA
201 208.92 precipitation 0.1 14400 > th dose dependent rect. 23 21
206 208.98 precipitation 0.1 14400 > th dose dependent sin 2 NA
209 209.05 precipitation 0.1 14400 > th dose dependent rect. 2 18
229 209.30 humidity 80.0 14400 > th dose independent rect. 14 1
232 209.32 humidity 80.0 14400 > th dose independent rect. 13 3
255 209.62 precipitation 0.1 4320 > th dose dependent rect. 18 23
352 210.72 humidity 80.0 14400 < th dose independent rect. 14 1
379 211.10 wind 9.0 14400 < th dose independent rect. 7 4
403 211.45 wind 1.0 43200 > th dose independent rect. 1 1
420 211.63 precipitation 0.1 14400 < th dose independent rect. 12 22
423 211.63 precipitation 0.1 14400 < th dose dependent rect. 12 22
425 211.66 precipitation 0.1 14400 > th dose independent rect. 12 22
430 211.68 precipitation 0.1 14400 > th dose independent rect. 12 20
431 211.68 precipitation 0.1 14400 < th dose independent rect. 12 20
432 211.68 precipitation 0.1 14400 > th dose independent rect. 9 23
433 211.68 precipitation 0.1 14400 < th dose dependent rect. 12 20
440 211.72 precipitation 0.1 14400 < th dose independent rect. 9 23
441 211.72 precipitation 0.1 14400 < th dose dependent rect. 9 23
443 211.73 precipitation 0.1 14400 > th dose independent rect. 9 21
450 211.75 precipitation 0.1 14400 < th dose independent rect. 9 21
452 211.75 precipitation 0.1 14400 < th dose dependent rect. 9 21
461 211.81 precipitation 0.1 14400 < th dose independent rect. 7 23
462 211.81 precipitation 0.1 14400 < th dose dependent rect. 7 23
469 211.84 precipitation 0.1 14400 > th dose independent rect. 7 23
475 211.86 precipitation 0.1 14400 < th dose independent rect. 12 18
477 211.86 precipitation 0.1 14400 < th dose dependent rect. 12 18
518 212.01 precipitation 0.1 14400 > th dose independent no NA NA
519 212.01 precipitation 0.1 14400 < th dose independent no NA NA
521 212.01 precipitation 0.1 14400 < th dose dependent no NA NA
522 212.02 wind 1.0 43200 > th dose dependent rect. 24 8
581 212.24 precipitation 0.1 4320 > th dose dependent rect. 18 20
588 212.27 precipitation 0.1 14400 < th dose independent rect. 15 23
589 212.27 precipitation 0.1 14400 < th dose dependent rect. 15 23
591 212.28 precipitation 0.1 14400 > th dose independent rect. 15 23
602 212.35 wind 9.0 14400 < th dose independent rect. 10 1
604 212.35 precipitation 0.1 14400 < th dose independent rect. 5 23
607 212.35 precipitation 0.1 14400 < th dose dependent rect. 5 23
608 212.36 precipitation 0.1 14400 > th dose independent rect. 5 23
624 212.44 humidity 70.0 14400 > th dose dependent rect. 13 1
657 212.60 precipitation 0.1 4320 > th dose dependent rect. 18 16
661 212.62 precipitation 0.1 4320 > th dose dependent rect. 18 13
742 213.08 wind 3.0 43200 < th dose independent rect. 1 3
753 213.15 precipitation 0.1 4320 > th dose dependent sin 5 NA
757 213.17 precipitation 0.1 4320 < th dose independent rect. 3 11
758 213.17 precipitation 0.1 4320 < th dose dependent rect. 3 11
761 213.21 humidity 80.0 14400 > th dose independent rect. 9 9
775 213.31 precipitation 0.1 14400 > th dose independent rect. 19 23
780 213.32 precipitation 0.1 14400 < th dose independent rect. 19 23
783 213.32 precipitation 0.1 14400 < th dose dependent rect. 19 23
807 213.52 precipitation 0.1 4320 > th dose independent rect. 3 11
818 213.59 precipitation 0.1 14400 > th dose dependent rect. 13 7
894 213.90 precipitation 0.1 14400 > th dose dependent rect. 9 11
901 213.95 humidity 80.0 14400 > th dose dependent rect. 13 5
914 214.01 precipitation 0.1 14400 > th dose dependent rect. 7 13
922 214.06 humidity 80.0 14400 > th dose independent rect. 9 2