BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0617800 Os07g0617800|AK060481
(329 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0617800 Similar to Alanine aminotransferase 640 0.0
Os10g0390500 Alanine aminotransferase 559 e-159
Os10g0390600 Similar to Alanine aminotransferase 2 (EC 2.6.... 455 e-128
Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.... 446 e-125
Os07g0108300 Similar to Alanine aminotransferase 360 1e-99
Os02g0302400 Similar to Tyrosine aminotransferase-like protein 76 4e-14
Os02g0302700 Similar to Nicotianamine aminotransferase A 69 4e-12
Os01g0178000 Aminotransferase, class I and II domain contai... 68 1e-11
>Os07g0617800 Similar to Alanine aminotransferase
Length = 329
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/329 (94%), Positives = 312/329 (94%)
Query: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA
Sbjct: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
Query: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH
Sbjct: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
Query: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL
Sbjct: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
Query: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA
Sbjct: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
Query: 241 EGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQVPGTWHFRC 300
EGAMYLFPRIYLPQK RRLLEATGIVVVPGSGFGQVPGTWHFRC
Sbjct: 241 EGAMYLFPRIYLPQKAIGAAQAAGTAPDAYYARRLLEATGIVVVPGSGFGQVPGTWHFRC 300
Query: 301 TILPQEDKIPAIISKFKEFHEKFMDEFRD 329
TILPQEDKIPAIISKFKEFHEKFMDEFRD
Sbjct: 301 TILPQEDKIPAIISKFKEFHEKFMDEFRD 329
>Os10g0390500 Alanine aminotransferase
Length = 483
Score = 559 bits (1440), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/329 (80%), Positives = 290/329 (88%)
Query: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
MMMQLLIR+E DGILCPIPQYPLYSASIALHGG+LVPY+L+E TGWGLE+ +LKKQLE++
Sbjct: 155 MMMQLLIRNEKDGILCPIPQYPLYSASIALHGGALVPYYLNESTGWGLEISDLKKQLEDS 214
Query: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
+ KGI VRALVVINPGNPTGQVLAEENQ+ IV+FCKNEGLVLLADEVYQENIYV++KKF+
Sbjct: 215 RLKGIDVRALVVINPGNPTGQVLAEENQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFN 274
Query: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
SFKKIARSMGY +DDLPLVSFQSVSKGYYGECGKRGGYME+TGFSA VREQIYKVASVNL
Sbjct: 275 SFKKIARSMGYNEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKVASVNL 334
Query: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
CSN++GQILASL+MNPPKAGD SY S+ EKDGIL SLARRAKALE AFNSLEGITCNK
Sbjct: 335 CSNITGQILASLVMNPPKAGDASYASYKAEKDGILQSLARRAKALENAFNSLEGITCNKT 394
Query: 241 EGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQVPGTWHFRC 300
EGAMYLFP++ LPQK RLLEATGIVVVPGSGFGQVPGTWH RC
Sbjct: 395 EGAMYLFPQLSLPQKAIDAAKAANKAPDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRC 454
Query: 301 TILPQEDKIPAIISKFKEFHEKFMDEFRD 329
TILPQE+KIPAIIS+FK FHE FM +RD
Sbjct: 455 TILPQEEKIPAIISRFKAFHEGFMAAYRD 483
>Os10g0390600 Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)
(Glutamic--pyruvic transaminase 2) (Glutamic--alanine
transaminase 2) (ALAAT-2)
Length = 487
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/328 (64%), Positives = 257/328 (78%)
Query: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
MMM LLIR + DGILCPIP + LY+ S+ L G +LVPY+LDE GW + + +LKKQL+ A
Sbjct: 159 MMMHLLIRGKKDGILCPIPSHSLYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGA 218
Query: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
++KGI VR LVV+NPGNPTGQVL EENQ +IVE CKNE LVLLADEVYQENIY + KKF+
Sbjct: 219 RAKGIDVRGLVVVNPGNPTGQVLVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFN 278
Query: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
SFKK+ARS+GY + D+ LVSF SVS GYYGECG+RGGYMEVTGFS++VR ++YKVAS++
Sbjct: 279 SFKKVARSIGYGEGDISLVSFHSVSNGYYGECGRRGGYMEVTGFSSEVRGEVYKVASLSA 338
Query: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
CSN+SGQIL SL+MNPPK GDESY S+ E+D ILSSL+ A+A+ FNS+EG+TCNKA
Sbjct: 339 CSNISGQILMSLVMNPPKVGDESYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKA 398
Query: 241 EGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQVPGTWHFRC 300
EG + +FP + LP + RLLE+TGIVVVPGS FGQVPGTWHFRC
Sbjct: 399 EGGISVFPSVRLPPRAIEAAEAMNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRC 458
Query: 301 TILPQEDKIPAIISKFKEFHEKFMDEFR 328
TILPQE+K IIS+F FHE FM+EFR
Sbjct: 459 TILPQEEKTRQIISRFNVFHEAFMEEFR 486
>Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)
(Glutamic--pyruvic transaminase 2) (Glutamic--alanine
transaminase 2) (ALAAT-2)
Length = 486
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/328 (62%), Positives = 260/328 (79%)
Query: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
MMMQ+LIRS DGILCP+P+YPLYSASI LHGG++VPY L E++ WGLE+ E+K+ LE+A
Sbjct: 158 MMMQILIRSHEDGILCPLPEYPLYSASIILHGGTMVPYNLTEDSIWGLEIFEVKRCLEDA 217
Query: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
++ G+T+RA+VVINPGNPTGQVL+ NQ++IVEFC+ EGLV+LADEVYQEN+Y E+K+F+
Sbjct: 218 RASGLTIRAMVVINPGNPTGQVLSITNQEEIVEFCRKEGLVILADEVYQENVYTENKRFN 277
Query: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
SFKK+ARS+GY DL +VSF SVS GYYGECG+RGGYME+ GF DV +++YK+AS+ +
Sbjct: 278 SFKKVARSLGYDHHDLSIVSFHSVSMGYYGECGRRGGYMEICGFGDDVIDEMYKLASLTI 337
Query: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
C N++GQIL SL+M+PPK GDE++E FMVEK+ SSL +RAKAL++AFN LEG++CNK
Sbjct: 338 CPNIAGQILISLVMDPPKLGDEAFEIFMVEKEETYSSLLKRAKALQKAFNGLEGVSCNKF 397
Query: 241 EGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQVPGTWHFRC 300
EGAMYLFPR+ LPQ RLL+ATGI VVPGSGF V GT H RC
Sbjct: 398 EGAMYLFPRLRLPQAAIKAAQLEGVSPDVFYAHRLLDATGIAVVPGSGFHPVSGTSHIRC 457
Query: 301 TILPQEDKIPAIISKFKEFHEKFMDEFR 328
TILP E+ I A++ + FHE FMDEFR
Sbjct: 458 TILPGEETITAMVPSLQAFHEAFMDEFR 485
>Os07g0108300 Similar to Alanine aminotransferase
Length = 485
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/327 (53%), Positives = 228/327 (69%), Gaps = 1/327 (0%)
Query: 2 MMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEAQ 61
M+ +IR+E DGIL P+PQYPLYSA+I+L GGSLVPY+L+EE WGL+ L++ + A+
Sbjct: 153 MLNTIIRNERDGILVPVPQYPLYSAAISLFGGSLVPYYLEEEANWGLDFVNLRQTVASAR 212
Query: 62 SKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFHS 121
SKGITVRA+V+INPGNPTGQ L+E N K++++FC +E LVLLADEVYQ+NIY +++ F S
Sbjct: 213 SKGITVRAMVIINPGNPTGQCLSEGNIKELLKFCFHENLVLLADEVYQQNIYQDERPFIS 272
Query: 122 FKKIARSMG-YTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
+K+ MG ++ LVSF +VSKGY+GECG+RGGY E+T ++IYKVAS+ L
Sbjct: 273 ARKVLFDMGPPMSREVQLVSFHTVSKGYWGECGQRGGYFEMTNLPPKTVDEIYKVASIAL 332
Query: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
NV GQI L++NPPK GD SY F E IL SL RRA+ + + FNS + CN
Sbjct: 333 SPNVPGQIFMGLMVNPPKPGDISYLKFSAESKSILESLRRRARLMTDGFNSCRNVVCNFT 392
Query: 241 EGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQVPGTWHFRC 300
EGAMY FP+I LP K +LLEATGI VPGSGFGQ G +H R
Sbjct: 393 EGAMYSFPQIRLPPKAIDAAKRAGKAADVFYCLKLLEATGISTVPGSGFGQKEGVFHLRT 452
Query: 301 TILPQEDKIPAIISKFKEFHEKFMDEF 327
TILP E+ +PAI++ FK+F++ FMD++
Sbjct: 453 TILPAEEDMPAIMTSFKKFNDTFMDQY 479
>Os02g0302400 Similar to Tyrosine aminotransferase-like protein
Length = 430
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 41/298 (13%)
Query: 2 MMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEAQ 61
+M ++ S +L P P YPLY++ AL G + L ++ W +++ + EA
Sbjct: 130 IMMSVLASPGANVLLPRPGYPLYASRAALSGLEFRHFDLLPDSEWEVDLAGV-----EAL 184
Query: 62 SKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFHS 121
+ TV A+V++NP NP G V + ++ KI E + G+++++DEVY F
Sbjct: 185 ADANTV-AMVIVNPNNPCGCVYSRDHLAKIAETARKLGIMVISDEVYDH--------FAF 235
Query: 122 FKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQI-------YK 174
K MG D P+++ +SK + G R G++ T + +R + Y+
Sbjct: 236 GSKPFVPMGVFGDVAPVMTLGGISKRWMVP-GWRLGWIAATDPNGILRNKKIIDSVIDYR 294
Query: 175 VASVNLCSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEG 234
SV+ + V G + P ++ ++F G++ + A+ E ++
Sbjct: 295 AISVDPVTFVQGAL--------PDILAKTDDAFFTNALGVVK---KAAEICYEKLKEIDC 343
Query: 235 ITC-NKAEGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGFGQ 291
ITC +K EG+M++ ++ L +L + +V+ PGSG G
Sbjct: 344 ITCPHKPEGSMFVMAKLDL-------SSLDGIEDDVDFCSKLAKEESVVICPGSGLGM 394
>Os02g0302700 Similar to Nicotianamine aminotransferase A
Length = 439
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 2 MMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEAQ 61
+M ++ IL P P +PLY + + + L E GW ++++ ++ +E
Sbjct: 141 VMISVLAQPGSNILLPKPGFPLYESRTTFSNLEVRHFDLIPERGWEVDLEGVQAIADE-- 198
Query: 62 SKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFHS 121
A+VVINP NP G V + ++ KI E + GL+++ADEVY +++ + F
Sbjct: 199 ----NTVAIVVINPSNPCGSVYSYDHLAKIAETARKLGLLIIADEVY-DHLAFGNNPFI- 252
Query: 122 FKKIARSMGYTDDDLPLVSFQSVSK---------GYYGECGKRGGYMEVTGFSADVREQI 172
+G +P+++ S+SK G+ C G E A V + I
Sbjct: 253 ------PIGVFGKTVPVITLGSISKRWLVPGWRLGWIATCDPNGILKE-----AKVNQSI 301
Query: 173 --YKVASVNLCSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFN 230
Y S + + V G I P+ + E + + IL L A +
Sbjct: 302 ENYINISTDPATFVQGAI--------PQIIANTKEDYF---NKILDQLRNAADLCYDKIK 350
Query: 231 SLEGITC-NKAEGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGSGF 289
++GITC +K EG+M++ ++ L RL + ++V+PGS
Sbjct: 351 DIKGITCPHKPEGSMFVMVKLDL-------SYLDGFHDDMDFCCRLAKEESVIVLPGSAL 403
Query: 290 G 290
G
Sbjct: 404 G 404
>Os01g0178000 Aminotransferase, class I and II domain containing protein
Length = 394
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 38/243 (15%)
Query: 49 EVDELKKQLEEAQSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVY 108
+VD L+K L+E + + V+NPGNP+G + + ++I E C+N G L+ D Y
Sbjct: 151 DVDWLEKVLQENNP---IPKLVSVVNPGNPSGAFIPKPMLERISELCRNAGAWLVVDNTY 207
Query: 109 QENIYVEDKKFHSFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADV 168
+ +Y D H Y + +V+ S SK YG G R GY+ + +
Sbjct: 208 EYFMY--DGMEH----------YCLEGNHIVNLFSFSKA-YGMMGWRVGYIAHPNEADGL 254
Query: 169 REQIYKVA-SVNLCSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEE 227
Q+ KV ++ +C+++ GQ LA + +AG E ++ E+ + L + + L E
Sbjct: 255 HAQLLKVQDNIPICASIIGQRLALYAL---EAGPE----WIRER---VRDLVKNRELLME 304
Query: 228 AFNSLEGITCNKAEGAMYLFPRIYLPQKXXXXXXXXXXXXXXXXXRRLLEATGIVVVPGS 287
A + L + EGA+YL+ + LP+K R L G+ V+PGS
Sbjct: 305 AMSPLGKDSVKGGEGAIYLWAK--LPEK---------CSDDFEVVRWLANKHGVAVIPGS 353
Query: 288 GFG 290
G
Sbjct: 354 ASG 356
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,614,303
Number of extensions: 414486
Number of successful extensions: 1046
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1048
Number of HSP's successfully gapped: 8
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)