BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0554500 Os07g0554500|Os07g0554500
(414 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0554500 Cyclin-like F-box domain containing protein 760 0.0
Os07g0554200 Cyclin-like F-box domain containing protein 516 e-146
Os04g0258900 Cyclin-like F-box domain containing protein 194 8e-50
Os07g0554100 186 3e-47
Os07g0554900 Cyclin-like F-box domain containing protein 164 1e-40
Os02g0199600 Cyclin-like F-box domain containing protein 158 8e-39
Os10g0135300 Cyclin-like F-box domain containing protein 156 3e-38
Os07g0554600 Conserved hypothetical protein 136 3e-32
Os10g0135400 Cyclin-like F-box domain containing protein 113 2e-25
Os07g0555000 Conserved hypothetical protein 106 3e-23
Os07g0555100 Conserved hypothetical protein 99 4e-21
Os07g0555300 Conserved hypothetical protein 81 2e-15
Os10g0135500 Cyclin-like F-box domain containing protein 75 1e-13
Os09g0323400 67 3e-11
>Os07g0554500 Cyclin-like F-box domain containing protein
Length = 414
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/414 (92%), Positives = 384/414 (92%)
Query: 1 MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR 60
MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR
Sbjct: 1 MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR 60
Query: 61 RARALHPPSLLGFCASPGGFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPLSWVVRDVLD 120
RARALHPPSLLGFCASPGGFH DFGFSFLPSPLSWVVRDVLD
Sbjct: 61 RARALHPPSLLGFCASPGGFHPAEPPHPSAPAARAVLRAADFGFSFLPSPLSWVVRDVLD 120
Query: 121 GRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTF 180
GRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTF
Sbjct: 121 GRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTF 180
Query: 181 FAPIGXXXXXXXXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSR 240
FAPIG TSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSR
Sbjct: 181 FAPIGEEERAAAAVAETSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSR 240
Query: 241 PACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGE 300
PACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGE
Sbjct: 241 PACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGE 300
Query: 301 GKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPSRDGFRVLGVTGKELCL 360
GKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPSRDGFRVLGVTGKELCL
Sbjct: 301 GKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPSRDGFRVLGVTGKELCL 360
Query: 361 QVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
QVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPSLSSPSI
Sbjct: 361 QVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
>Os07g0554200 Cyclin-like F-box domain containing protein
Length = 409
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 296/426 (69%), Positives = 319/426 (74%), Gaps = 29/426 (6%)
Query: 1 MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR 60
MASP HR+LD ALPDDLLAEVLIRLPSLADLGRA A+CASFRRV TD AFLR
Sbjct: 1 MASP---PAHRQLD-----ALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLR 52
Query: 61 RARALHPPSLLGFC-ASPGG----FHXXXXXXXXXXXXXXXXXXXDFGFSFLPSP--LSW 113
RARALHPPSLLGFC ASPG FH DFGFSFLPSP L W
Sbjct: 53 RARALHPPSLLGFCGASPGAGGFHFHPAEPPHPSAPAARGVLRAADFGFSFLPSPDPLGW 112
Query: 114 VVRDVLDGRFLLDRDGGEGGAAL--RILAVCDPLFRRYSLLPQIPEDLAA-SVRRRPRRG 170
VVRDVL GRFLLDRD E GAA RILAVCDPLFRR+ LLPQIP+DLAA S R+ RRG
Sbjct: 113 VVRDVLGGRFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDLAAASALRQSRRG 172
Query: 171 VAPNGRFDTFFAPIGXXXXXXXXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPC 230
DTFFAPIG TSFKVIWIA+C DKLVAFVFSSVTGQWRATAS C
Sbjct: 173 -------DTFFAPIGEEECVAAVAE-TSFKVIWIAECADKLVAFVFSSVTGQWRATASVC 224
Query: 231 WGDLSPAFSRPACRSLLRRSYAYGCFYWMMGDS-GNLLVLDMCKMNFSIVKLPSSPPGRD 289
WGDLSPAFSRPACRS+ RRSYAYGCFYWMMGDS NLLVLDM +M+FS+++LPSS PG D
Sbjct: 225 WGDLSPAFSRPACRSMSRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHD 284
Query: 290 IVECAIVEAGEGKIGMFAFCNCIDIYALELYSTTMQNEGRVAS-KWSFESAILMPSRDGF 348
IVECAIVE GEGKIGMFAF N I YAL++YS MQNEG+ A+ KWSFE+A+++P D F
Sbjct: 285 IVECAIVEEGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPF-DEF 343
Query: 349 RVLGVTGKELCLQVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPS 408
+LG T +EL L+V P GCY LEFSTNPSCK LE VRRVI GV SL FLYVGYPPS
Sbjct: 344 GILGATSRELFLKVPPSFARGCYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPS 403
Query: 409 LSSPSI 414
LSSPSI
Sbjct: 404 LSSPSI 409
>Os04g0258900 Cyclin-like F-box domain containing protein
Length = 408
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 202/418 (48%), Gaps = 38/418 (9%)
Query: 20 ALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALHPPSLLGFCASPG- 78
AL DD+LAE+L+R+PS DL RASAAC+SF R+AT P FLRR R+LH P LG G
Sbjct: 6 ALTDDVLAEILVRVPSSCDLARASAACSSFCRIATSPRFLRRFRSLHAPLPLGVLCPDGA 65
Query: 79 -GFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPL-SWVVRDVLDGRFLLDRDGGEGGAAL 136
FH DF FSFLP P +W++RD DGRFLLDR G A
Sbjct: 66 AAFHPAMPPHPSAPAARALALAADFAFSFLPPPARAWLLRDHRDGRFLLDRALAGGSTAF 125
Query: 137 RILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRF-----DTFFAPIGXXXXXX 191
+AVCDPLFRRY LLP IP+DLAASV + P +G + F A G
Sbjct: 126 TDVAVCDPLFRRYVLLPPIPDDLAASV-QNPYLQCGGDGGLQSRSSEIFLASCGSDAGGE 184
Query: 192 XXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSRPACRSLLRRSY 251
F VIW+A C KLVAF FSS + QWRA + P LS R L +R++
Sbjct: 185 EPL----FAVIWMACCRGKLVAFFFSSESQQWRALSPPEHYALST--RRVMGVRLGQRNH 238
Query: 252 AYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGEGKIGMFAFCNC 311
A+GCFYWM+ + LVLD +M F +V + GR ++ + E G +
Sbjct: 239 AHGCFYWMITLTHRWLVLDTRRMEFLVVDISPVLSGRAMMFSNQIITLESMDG-WTIVVV 297
Query: 312 IDIYALE----LYSTTMQNEGRVASKWSFESAILMPSRDGFRVLGVTGKELCLQV----- 362
D++ + LY + +W +S I +P G+R G+ G C
Sbjct: 298 ADVFRSDKRCVLYFYKFMY---FSDRWQLQSKINLPEEWGYRFRGIIGASECYLFIKLDH 354
Query: 363 ------SPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
P+ + Y F + +L + G S +LY G+PPS S PS+
Sbjct: 355 PKQNLGDPVQQNAMY---FMFDIKTMQLGRFSEICSGT-VSEAYLYTGFPPSQSLPSV 408
>Os07g0554100
Length = 396
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 184/368 (50%), Gaps = 40/368 (10%)
Query: 20 ALPDDLLAEVLIRLPSLADLGRASAACASFRR-VATDPAFLRRARALHPPSLLGFCASPG 78
AL +DL+AE+ +RLP+ DL RASAAC SFRR V TD +FLRR R+LH P +GF
Sbjct: 15 ALTNDLIAEIFLRLPTPEDLVRASAACVSFRRLVTTDRSFLRRFRSLHAPPFVGFLDH-R 73
Query: 79 GFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPL-SWVVRDVLDGRFLLDRD------GGE 131
GFH DF SFLPSP SW+VRDV GR L+DRD G E
Sbjct: 74 GFHPALPPHPSAPVARAVADAADFALSFLPSPAGSWMVRDVRGGRVLVDRDTKAETGGSE 133
Query: 132 GGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXXXXX 191
+AVCDPL RR+ LLP IP+DLAASV R R V + + F AP
Sbjct: 134 KPLVFTEIAVCDPLRRRFLLLPPIPDDLAASVDRPVR--VHLDRWCEPFLAP-----HIE 186
Query: 192 XXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDL--------------SPA 237
TSFKVIW+AQC K++AFVF+S TGQW A ASP DL
Sbjct: 187 EEEDDTSFKVIWMAQCKAKIIAFVFNSSTGQWLAGASPSTTDLFNGAGLSPPPSSSSPSL 246
Query: 238 FSRPACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVE 297
R R YA GCF W + + LLVLD M FSI + P G AIVE
Sbjct: 247 VFSSPGRVFSSRRYACGCFCWGILRT-MLLVLDTRLMKFSIAEPPPVCLGG---PTAIVE 302
Query: 298 AGEGKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPSRDGFR--VLGVTG 355
AGEG G+FA + +L+ + EG + + ++P G+R + G
Sbjct: 303 AGEGMTGIFALRGSVG-GTFDLHYSIWGKEGATRRE---QMEKIIPLDHGYRYYIRGAME 358
Query: 356 KELCLQVS 363
K L L S
Sbjct: 359 KHLLLARS 366
>Os07g0554900 Cyclin-like F-box domain containing protein
Length = 428
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 190/443 (42%), Gaps = 44/443 (9%)
Query: 1 MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR 60
MASP R++ + L DDLL E+ IRL + ADL RAS++C FRRV TDP+FLR
Sbjct: 1 MASP-RQNPAPAPPPPPPVILTDDLLEEIFIRLDTPADLARASSSCPPFRRVITDPSFLR 59
Query: 61 RARALHPPSLLGFCASPGGFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPLSWVVRDVLD 120
R RAL+PP LLG D +FLP +W RDV D
Sbjct: 60 RYRALYPPPLLGILPRDAD---AFLPAEPPHRSAPAAGAVDLSCAFLPDRHTWRRRDVRD 116
Query: 121 GRFLLDR-------DGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAP 173
GR L R D L LAVCDP RY++L +IP+DL + + +
Sbjct: 117 GRILFSREEEYYAPDDDGADVLLMDLAVCDPFSGRYAILTEIPQDLIDPLDLEGQSFLC- 175
Query: 174 NGRFDTFFAPIGXXXXXXXXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGD 233
F+ F AP SF+V+++A+ KL+AF+F G+WRA W
Sbjct: 176 ---FEPFLAPATAADDDEDEVGGASFRVMYMARGLTKLMAFIFPWEAGEWRAVEYDGWAA 232
Query: 234 LSPAFSRPACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVEC 293
L S + R + +G W++ + LL+LD S +++ +DIV
Sbjct: 233 LINGTST-WLAEMFWRFHVHGNICWLLDWANKLLILDTTTNQLSTIEMVPGSWKKDIV-- 289
Query: 294 AIVEAGEGKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPSRDGFR-VLG 352
+E EG++G+F N + +LY Q+ + +W AI +P + +LG
Sbjct: 290 -FLETEEGQLGLFVLINNF-YTSFDLYYAIWQDNDKGVKQWRVIEAIQLPLNYWYENLLG 347
Query: 353 VTGKELCLQVSPICVSGCYLLE---------------------FSTNPSCKKLEFVRRVI 391
+ G + LQ P + FS ++E
Sbjct: 348 IDGGYVLLQGIPKGSKSSWQASSRQNGSSQASESSSEVPEHVCFSVEVKTFRVERFCGTN 407
Query: 392 RGVRTSLPFLYVGYPPSLSSPSI 414
++T+ L+ YPPSLS P +
Sbjct: 408 HAIKTA--NLFTSYPPSLSPPRL 428
>Os02g0199600 Cyclin-like F-box domain containing protein
Length = 434
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 207/436 (47%), Gaps = 53/436 (12%)
Query: 18 ELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALH---PPSLLG-- 72
E +PDD++ E+L+RLPS + L RA+AAC++FR + + P FLRR RA H P +LLG
Sbjct: 13 ETQVPDDVVDEILVRLPSRSSLARAAAACSAFRALVSSPRFLRRHRARHGPCPGALLGSF 72
Query: 73 -FCASPGGFHXXXXXXXXXXXXXXXXXXXDFGFSFL-PSP----------LSWVVRDVLD 120
F + G FH DF F+FL PSP L W+VRD D
Sbjct: 73 AFSSEGGAFHPAEPPHASAAAARAVAAAADFSFAFLPPSPVVGDDDPRRGLGWIVRDHRD 132
Query: 121 GRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTF 180
GRFLLDR LAVCDPL RRY +LP IP +LAA+V RP + R + F
Sbjct: 133 GRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAV-DRPLGVIGGRRRCEPF 191
Query: 181 FAPIGXXXXXXXXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASP---CWGDLSPA 237
AP +F VIW A+CP K+VAF F+S G+WRA SP W
Sbjct: 192 LAPC-DADADADAESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRSP 250
Query: 238 FSRPACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVE 297
F P RR YA+GCFYW+ + LVLD M ++ ++P SP A+VE
Sbjct: 251 FGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIP-SPACYWEEHVAVVE 309
Query: 298 AGEGKIGMFAFCNCIDIYALE----LYSTTMQNEGRVASKWSFESAILM--PSRDG--FR 349
+GK+G+FA D Y LY T+ + G +W E + + P+ G +
Sbjct: 310 GEDGKVGVFAH----DFYRAGGEACLYYYTIVDGGD-GPRWRLERTVPLPWPAAHGRPYS 364
Query: 350 VLGVTGKELCLQVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSL----------- 398
+ L L+VS + F T+ + +E R ++ +
Sbjct: 365 IRAAANGSLILEVSHGTPA------FMTSYRSRDVELYRIDVKSFELEMICRARCAAGDI 418
Query: 399 PFLYVGYPPSLSSPSI 414
+ Y G+PP LS P++
Sbjct: 419 AWAYFGFPPLLSLPTV 434
>Os10g0135300 Cyclin-like F-box domain containing protein
Length = 415
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/416 (33%), Positives = 187/416 (44%), Gaps = 48/416 (11%)
Query: 23 DDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALHPPSLLGFCASPGG--- 79
D++L E+ +RL +L DL RASAACA+FRR+ T AFLRR +LHP LLGF G
Sbjct: 24 DEVLEEIFLRLDALPDLARASAACATFRRLITARAFLRRLHSLHPRPLLGFFKREGPSCE 83
Query: 80 -FHXXXXXXXXXXXXXXXXXXXDFGFSFLP-SPLSWVVRDVLDGRFLLDRDGGEGGAALR 137
F D FSFLP +P W +R++ G LL G GG
Sbjct: 84 FFPAAPPHSSSAAASAVARGAADLTFSFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFP 143
Query: 138 ILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXXXXXXXXXXT 197
+ VCDPL RRY+ +PQIP+DLAA +R R G P G FD AP +
Sbjct: 144 DVVVCDPLHRRYAQIPQIPDDLAAPIR---RSGSLPKG-FDYLLAP-ARREEEEEEEEDS 198
Query: 198 SFKVIWIAQCPDK--LVAFVFSSVTGQWR-ATASPCWGDLSPAFSRPACRSLLRRSYAYG 254
SFKV+ + ++ + FVFSS G WR AT SRP C +
Sbjct: 199 SFKVVCRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRC--------VHR 250
Query: 255 CFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIV----ECAIVEAGEGKIGMFAFCN 310
C YW+ LL+LD +M S+ + PP V AI EAGE ++G+F
Sbjct: 251 CVYWLTRFLDRLLILDTDEMELSMFD--NFPPSTGFVLNHTTAAIAEAGEDRLGVFN--- 305
Query: 311 CIDIYALELYSTTMQNEGRVASKWSFESAI-LMPSRDGFRVLGVTGKE----------LC 359
+D++ + L S ++ G +W + I L+P +R + +
Sbjct: 306 -LDVHNVNLLSRAIR--GSADEQWRHDKTIPLLPGYSIWRFVNHADVDGYILLGGVLGSG 362
Query: 360 LQVSPICVSGCYLLEFSTNPSCKKLE-FVRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
LQ PI Y FS + +LE I R S LY +PP LS SI
Sbjct: 363 LQSDPITDGLQY---FSLDLKTFRLERLCPMTIYQARNSPTELYTSFPPPLSLSSI 415
>Os07g0554600 Conserved hypothetical protein
Length = 256
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 117/230 (50%), Gaps = 18/230 (7%)
Query: 18 ELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALHPPSLLGFCASP 77
+L L D+LL EV +RLP+ ADL RAS A ASFRR+ T AFLRR R LHPP +LG A+
Sbjct: 19 QLDLTDELLEEVFVRLPTAADLARASTAFASFRRLITGHAFLRRFRRLHPPPVLGILAAG 78
Query: 78 GGFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPLSWVVRDVLDGRFLL------DRDGGE 131
DF SFLPS W +R DGR+LL +
Sbjct: 79 FLAAQPPHPSAAAARALADPDAADFSCSFLPSRDRWCLRHFSDGRYLLSAIPERSDPAPD 138
Query: 132 GGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXXXXX 191
A +R AVCDPL+RRY LLP IP+DLA+ V + + F+ F P
Sbjct: 139 HRALVREFAVCDPLYRRYLLLPPIPDDLASVVNQ------SEIVNFEPFLCP------AT 186
Query: 192 XXXXXTSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSRP 241
T F+VI +AQC KLVAF +S +GQW A W DL+ S P
Sbjct: 187 EDEEDTMFRVICLAQCEAKLVAFTYSRCSGQWHAVEFDGWRDLTRGTSNP 236
>Os10g0135400 Cyclin-like F-box domain containing protein
Length = 386
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 176/418 (42%), Gaps = 65/418 (15%)
Query: 21 LPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALHPPSLLGFCASPG-- 78
LP++L+ E+LIRL LADL RA++AC RR+ T AFL R ALH LLG
Sbjct: 10 LPEELVVEILIRLTDLADLARAASACKPLRRLITSRAFLARLHALHAKPLLGLLLLERDR 69
Query: 79 -GFHXXXXXXXXXXXXXXXXXXXDFGFSFLPSPLS-WVVRDVLDGRFLLDRDG------- 129
GF DF FSFLP + W +RDV G LL
Sbjct: 70 CGF-----LPAATAVAAAVARASDFAFSFLPDHAAGWRLRDVRHGLALLSSSSSSSYLSP 124
Query: 130 -GEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXX 188
G+ G ++ VCDP+ RR+ +P IP+DL A VRR FD AP G
Sbjct: 125 LGDRGFFPDVV-VCDPMRRRHVRVPPIPDDLTAGVRR------IAVEHFDYLLAPAG--- 174
Query: 189 XXXXXXXXTSFKVIWIAQCPDK--LVAFVFSSVTGQWRATASPCWGDLSPAFSRPACRSL 246
+SF+V+ + P + + FVFSS WRA A L
Sbjct: 175 -----RDGSSFRVVCRPKLPKQCDVTVFVFSSGAAFWRAAVLDACA---------ATEKL 220
Query: 247 LRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGE-GKIGM 305
+G YW SG LL+LD M+F V + ++ +C I EA E G++ +
Sbjct: 221 FLPQSVHGYVYWRTHSSGTLLMLDTRDMDFFFVNIQTN-------KCVIGEAEEVGRLAV 273
Query: 306 FAFCNCIDIYALELYSTTMQNEGRVASKWSFESAI-LMPSRDGFRVLGVTGKELCLQVSP 364
F + ++ +E+ S ++ G W + I L+P G++ E L +
Sbjct: 274 FNTIVDVGVHKVEILSKAIR--GGADEPWRHDRTIPLLP---GYKWRAARMAEGYLLLHG 328
Query: 365 IC------VSGCYLLEFSTNPSCKKLE-FVRRVIRGVRTSLPF-LYVGYPPSLSSPSI 414
I G L F+ + KLE + RG F LY +PP LS SI
Sbjct: 329 IVGNNSWSTPGIQLQHFTLDLKTLKLESLCDSISRGRHHHPQFDLYRSFPPPLSLSSI 386
>Os07g0555000 Conserved hypothetical protein
Length = 207
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 202 IWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLSPAFSRPACRSLLRRSYAYGCFYWMMG 261
+++A+C KLV F FSS T QW +T+ WG L A + +L +R +A+GC +W +
Sbjct: 1 MYMARCQSKLVVFTFSSDTQQWSSTSYDGWGILVAA-TPSQETALTQRHHAHGCIFWFLR 59
Query: 262 DSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGEGKIGMFAFCNCIDIYALELYS 321
+ LLVLD M S + LPSS +I + AIVE+ G IGMFA + I +++
Sbjct: 60 WAKKLLVLDTFTMELSTINLPSSEL-IEIQQVAIVESARGGIGMFAMVDEILDSTFDMFY 118
Query: 322 TTMQNEGRVASKWSFESAILMPSRDGFRVLGVTGKELCLQ----VSPICVSGCYLLEFST 377
EG A+KW E + +P + ++G G L +Q P+ C+ +E T
Sbjct: 119 VVWDPEG--ANKWPLERLMKLPVEFRYNLVGAAGGYLLVQGISVQGPVQDQVCFTVELKT 176
Query: 378 NPSCKKLEF---VRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
K+E RR + G L+ G+ PSLS PS+
Sbjct: 177 F----KVEMFCETRRTLIGAD-----LFAGFAPSLSPPSV 207
>Os07g0555100 Conserved hypothetical protein
Length = 402
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 124/314 (39%), Gaps = 33/314 (10%)
Query: 47 ASFRRVATDPAF--LRRARALHPPSLLGFCASPGGFHXXXXXXXXXXXXXXXXXXXDFGF 104
A+ V + PAF +R R+ PP LG A GF+ DF +
Sbjct: 25 AAASSVGSSPAFPPRKRRRSGRPPPFLGL-ACYDGFYPATEPHPSAERAIALARKADFEY 83
Query: 105 SFLP-----SPLSWVVRDVLDGRFLL-------DRDGGE-GGAALRILAVCDPLFRRYSL 151
F+P W D DGR L+ D DGG+ AVCDPLF+RY +
Sbjct: 84 GFVPWVPEEEAWGWFPLDARDGRVLIQSKYFPDDPDGGDFPRPRFMNYAVCDPLFKRYVM 143
Query: 152 LPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXXXXXXXXXXTSFKVIWIAQCPDKL 211
LP +P+DL A+ G+ AP TSF+VI +A+ L
Sbjct: 144 LPPVPDDLTANEGSLVDFGLC--------LAP------SQEDEADTSFRVICVARYNTNL 189
Query: 212 VAFVFSSVTGQWRATASPCWGDLSPAFSRPACRSLLRRSYAYGCFYWMMGDSGNLLVLDM 271
VAFVFSSVT QW +S W L P L GCFYW + + +LVLD
Sbjct: 190 VAFVFSSVTRQWGIGSSSTWSSLGTE-EPPNRHGLSCFDCVDGCFYWTVPSADKILVLDA 248
Query: 272 CKMNFSIVKLPSSPPGRDIVECAIVEAGEGKIGMFAFCNCIDIYALELYSTTMQNEGRVA 331
KM FS++ D I EG GM + Q++
Sbjct: 249 IKMEFSVINYAHR--VEDGFRACIAVDTEGTPGMLTVGEYLGNREFRFSRIAKQSDRESP 306
Query: 332 SKWSFESAILMPSR 345
++ E+ I +PS
Sbjct: 307 NERLSENIIQLPSN 320
>Os07g0555300 Conserved hypothetical protein
Length = 253
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 139 LAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGXXXXXXXXXXXTS 198
LAVCDP+ RRY +LP IP+DL S + G+ F+TF AP TS
Sbjct: 4 LAVCDPVSRRYVILPPIPDDLITSGE---QEGLLV---FETFLAPAA--KEEEEMVGTTS 55
Query: 199 FKVIWIAQCPDKLVAFVFSSVTGQWRATASPCWGDLS--PAFSRPACRSLLRRSYAYGCF 256
F+V+ A K+V FVFSS+T +W ++ S W L+ P S A L Y F
Sbjct: 56 FRVVARANYESKVVIFVFSSLTEEWHSSRSVSWSLLTADPWLSSTAQAHLWFFPRYYAHF 115
Query: 257 -YWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIVECAIVEAGEGKIGMFAFC 309
YW+M LLVLD KM F + RD AI+E E IG AFC
Sbjct: 116 VYWVMHLVDMLLVLDTSKMAFFTINFQWD---RDF---AILETEEDMIG--AFC 161
>Os10g0135500 Cyclin-like F-box domain containing protein
Length = 410
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 134/318 (42%), Gaps = 46/318 (14%)
Query: 113 WVVRDVLDGRFLLDRDGG---EGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRR 169
W +RDV G +L +G + + VC+PL RRY+ +P I +DLAA +R
Sbjct: 123 WRLRDVRHGLAVLSTRHAVTDDGCFSFPDVVVCNPLRRRYAWIPPISDDLAAPIR---SL 179
Query: 170 GVAPNGRFDTFFAPIGXXXXXXXXXXXTSFKVIWIAQCPD--KLVAFVFSSVTGQWR-AT 226
GV FD AP G SF+VI Q P + FVFSS WR AT
Sbjct: 180 GVGVED-FDYLVAPAGREGL--------SFRVICRPQLPMGCDVTVFVFSSSAVIWRAAT 230
Query: 227 ASPCWGDLSPAFSRPACRSLLRRSYAYGCFYW-MMGDSGNLLVLDMCKMNFSIVKLPSSP 285
C A L+ YA+G YW ++ + LL+LD M+F V
Sbjct: 231 LHAC----------AATAQLVSPQYAHGYAYWRLIRSATRLLLLDTRDMDFFFVDFEQ-- 278
Query: 286 PGRDIVECAIVEAGE-GKIGMFAFCNCIDIYALELYSTTMQNEGRVASKWSFESAILMPS 344
R + AI EAGE G++ MF + + +EL S ++ G W + I +
Sbjct: 279 --RSVPWQAIGEAGEVGRLAMFNIAHA--NHTVELLSGAIR--GSADEHWRHDKTIPLLP 332
Query: 345 RDGFRVLGVTGKELCLQ------VSPICVSGCYLLEFSTNPSCKKLE-FVRRVIRGVRTS 397
+R+L + L LQ + G L F+ + + KLE +G+
Sbjct: 333 GYKWRILKLAEGYLLLQGRILGDGTSQFTPGDQLQYFTLDINTFKLERLCASTPQGISYH 392
Query: 398 LPF-LYVGYPPSLSSPSI 414
F LY +PP LS SI
Sbjct: 393 PQFELYRCFPPPLSFSSI 410
>Os09g0323400
Length = 422
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 19 LALPDDLLAEVLIRLPSLADLGRASAACASFRRV--ATDPAFLRRARALHPPSLLGFCAS 76
+ LPDDL+ +L+RL S L RA++ C +RR+ A D FLRR R+LH P++ G+ +
Sbjct: 1 MDLPDDLVELILLRLASTVYLIRAASTCKQWRRIVAAADAGFLRRFRSLHAPAIAGYYYN 60
Query: 77 PGGFHXXXXXXXXXXXXXXXXXXXDFGFSFL-------------PSPLSWVVRDVLDGRF 123
F F FL S SW + D
Sbjct: 61 SEKFTSFAPSSPSASASAPAIDDSHFSLDFLQVIVQDIVDGSRPQSSSSWRIMDSRGSLL 120
Query: 124 LLDRDGGEGGAALRILAVCDPLFRRYSLL 152
LLD G +R L VC+PL RRY +
Sbjct: 121 LLDFAGSHPDDGVRSLLVCEPLTRRYQWV 149
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,366,603
Number of extensions: 652164
Number of successful extensions: 2384
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2355
Number of HSP's successfully gapped: 14
Length of query: 414
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 311
Effective length of database: 11,657,759
Effective search space: 3625563049
Effective search space used: 3625563049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)