Os10g0135300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0135300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.14 | 0.266 | 9.16 | 1.84 | 0.364 | -0.551 | -0.00948 | 2.29 | 0.839 | 5.7 | 23.41 | 1258 | -- | -- |
| 32.59 | 0.268 | 9.23 | 1.23 | 0.292 | -0.603 | -0.454 | -- | 0.698 | 9.24 | 21.32 | 1182 | -- | -- |
| 32.05 | 0.264 | 9.17 | 1.82 | 0.364 | -0.536 | -- | 2.16 | 0.844 | 5.61 | 22.81 | 1218 | -- | -- |
| 33.3 | 0.271 | 9.23 | 1.21 | 0.289 | -0.589 | -- | -- | 0.691 | 9.08 | 22.13 | 56 | -- | -- |
| 36.99 | 0.283 | 9.16 | 1.95 | -- | -0.673 | -- | 2.98 | 0.845 | -- | 24.73 | 1801 | -- | -- |
| 38.77 | 0.292 | 9.26 | 1.09 | 0.342 | -- | -0.157 | -- | 0.597 | 6.5 | -- | -- | -- | -- |
| 38.82 | 0.292 | 9.26 | 1.09 | 0.342 | -- | -- | -- | 0.597 | 6.34 | -- | -- | -- | -- |
| 34.77 | 0.275 | 9.24 | 1.22 | -- | -0.599 | -- | -- | 0.689 | -- | 22.8 | 374 | -- | -- |
| 69.17 | 0.389 | 9.28 | -- | 0.307 | -0.237 | -- | -- | 0.502 | 7.09 | 23.79 | 49 | -- | -- |
| 44.9 | 0.313 | 9.26 | 1.1 | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
| 70.1 | 0.392 | 9.28 | -- | 0.357 | -- | -- | -- | 0.475 | 6.17 | -- | -- | -- | -- |
| 71.94 | 0.395 | 9.28 | -- | -- | -0.404 | -- | -- | 0.506 | -- | 24.8 | 333 | -- | -- |
| 76.72 | 0.409 | 9.29 | -- | -- | -- | -- | -- | 0.482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 68 | 31.66 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 76 | 31.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 79 | 31.73 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 83 | 31.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 84 | 31.76 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 88 | 31.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 99 | 31.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 105 | 31.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 110 | 31.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 121 | 31.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 137 | 31.94 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 154 | 31.98 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 157 | 31.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 172 | 32.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 180 | 32.07 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 185 | 32.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 211 | 32.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 214 | 32.13 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 269 | 32.23 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 277 | 32.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 282 | 32.24 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 283 | 32.25 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 340 | 32.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 344 | 32.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 346 | 32.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 349 | 32.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 369 | 32.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 370 | 32.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 372 | 32.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 386 | 32.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 472 | 32.47 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 478 | 32.48 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 509 | 32.50 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 540 | 32.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 542 | 32.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 673 | 32.61 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 675 | 32.61 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 715 | 32.64 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 729 | 32.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 731 | 32.65 | humidity | 90 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 732 | 32.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 749 | 32.68 | humidity | 90 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 766 | 32.70 | radiation | 1 | 720 | < th | dose dependent | sin | 0 | NA |
| 773 | 32.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 792 | 32.72 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 818 | 32.74 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 820 | 32.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 833 | 32.75 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 868 | 32.78 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 870 | 32.78 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 891 | 32.79 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 892 | 32.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 900 | 32.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 905 | 32.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 921 | 32.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 936 | 32.82 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 943 | 32.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 955 | 32.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 962 | 32.85 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 967 | 32.85 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 973 | 32.85 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 993 | 32.86 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |