BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0135300 Os10g0135300|AK072221
(415 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0135300 Cyclin-like F-box domain containing protein 634 0.0
Os10g0135500 Cyclin-like F-box domain containing protein 251 9e-67
Os10g0135400 Cyclin-like F-box domain containing protein 238 7e-63
Os07g0554500 Cyclin-like F-box domain containing protein 110 3e-24
Os04g0258900 Cyclin-like F-box domain containing protein 103 3e-22
Os02g0199600 Cyclin-like F-box domain containing protein 93 4e-19
Os07g0554100 90 3e-18
Os07g0554900 Cyclin-like F-box domain containing protein 89 6e-18
Os07g0555100 Conserved hypothetical protein 86 4e-17
Os07g0554200 Cyclin-like F-box domain containing protein 86 5e-17
Os07g0555300 Conserved hypothetical protein 76 4e-14
>Os10g0135300 Cyclin-like F-box domain containing protein
Length = 415
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/392 (82%), Positives = 324/392 (82%)
Query: 24 DEVLEEIFXXXXXXXXXXXXXXXXXTFRRLITARAFXXXXXXXXXXXXXGFFKREGPSCE 83
DEVLEEIF TFRRLITARAF GFFKREGPSCE
Sbjct: 24 DEVLEEIFLRLDALPDLARASAACATFRRLITARAFLRRLHSLHPRPLLGFFKREGPSCE 83
Query: 84 FFXXXXXXXXXXXXXXXXXXXXDLTFSFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFP 143
FF DLTFSFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFP
Sbjct: 84 FFPAAPPHSSSAAASAVARGAADLTFSFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFP 143
Query: 144 DVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXXDSSFKVV 203
DVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARR DSSFKVV
Sbjct: 144 DVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARREEEEEEEEDSSFKVV 203
Query: 204 CRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRCVHRCVYWLTRFLDRLL 263
CRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRCVHRCVYWLTRFLDRLL
Sbjct: 204 CRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRCVHRCVYWLTRFLDRLL 263
Query: 264 ILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNLDVHNVNLLSRAIRGSAD 323
ILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNLDVHNVNLLSRAIRGSAD
Sbjct: 264 ILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNLDVHNVNLLSRAIRGSAD 323
Query: 324 EQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXXQSDPITDGLQYFSLDLKTFR 383
EQWRHDKTIPLLPGYSIWRFVNHADVDGYI QSDPITDGLQYFSLDLKTFR
Sbjct: 324 EQWRHDKTIPLLPGYSIWRFVNHADVDGYILLGGVLGSGLQSDPITDGLQYFSLDLKTFR 383
Query: 384 LERLCPMTIYQARNSPTELYTSFPPPLSLSSI 415
LERLCPMTIYQARNSPTELYTSFPPPLSLSSI
Sbjct: 384 LERLCPMTIYQARNSPTELYTSFPPPLSLSSI 415
>Os10g0135500 Cyclin-like F-box domain containing protein
Length = 410
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 188/312 (60%), Gaps = 25/312 (8%)
Query: 112 LPATPGGWRLRNIRRGLALLSTRDG--GGGCF-FPDVVVCDPLHRRYAQIPQIPDDLAAP 168
LP G WRLR++R GLA+LSTR GCF FPDVVVC+PL RRYA IP I DDLAAP
Sbjct: 116 LPGRSGDWRLRDVRHGLAVLSTRHAVTDDGCFSFPDVVVCNPLRRRYAWIPPISDDLAAP 175
Query: 169 IRRSGSLPKGFDYLLAPARRXXXXXXXXDSSFKVVCRPRLTEECDITVFVFSSGAGIWRA 228
IR G + FDYL+APA R SF+V+CRP+L CD+TVFVFSS A IWRA
Sbjct: 176 IRSLGVGVEDFDYLVAPAGREGL-------SFRVICRPQLPMGCDVTVFVFSSSAVIWRA 228
Query: 229 ATLGSSLATAISVTSRPRCVHRCVYW-LTRFLDRLLILDTDEMELSMFDNFPPSTGFVLN 287
ATL + ATA V+ P+ H YW L R RLL+LDT +M+ D S +
Sbjct: 229 ATLHACAATAQLVS--PQYAHGYAYWRLIRSATRLLLLDTRDMDFFFVDFEQRSVPW--- 283
Query: 288 HTTAAIAEAGE-DRLGVFNL--DVHNVNLLSRAIRGSADEQWRHDKTIPLLPGYSIWRFV 344
AI EAGE RL +FN+ H V LLS AIRGSADE WRHDKTIPLLPGY WR +
Sbjct: 284 ---QAIGEAGEVGRLAMFNIAHANHTVELLSGAIRGSADEHWRHDKTIPLLPGYK-WRIL 339
Query: 345 NHADVDGYIXXXXXXXXXXQSDPITDGLQYFSLDLKTFRLERLCPMTIYQARNSPT-ELY 403
A+ + Q P D LQYF+LD+ TF+LERLC T P ELY
Sbjct: 340 KLAEGYLLLQGRILGDGTSQFTP-GDQLQYFTLDINTFKLERLCASTPQGISYHPQFELY 398
Query: 404 TSFPPPLSLSSI 415
FPPPLS SSI
Sbjct: 399 RCFPPPLSFSSI 410
>Os10g0135400 Cyclin-like F-box domain containing protein
Length = 386
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 207/405 (51%), Gaps = 43/405 (10%)
Query: 24 DEVLEEIFXXXXXXXXXXXXXXXXXTFRRLITARAFXXXXXXXXXXXXXGFFKREGPSCE 83
+E++ EI RRLIT+RAF G E C
Sbjct: 12 EELVVEILIRLTDLADLARAASACKPLRRLITSRAFLARLHALHAKPLLGLLLLERDRCG 71
Query: 84 FFXXXXXXXXXXXXXXXXXXXXDLTFSFLPATPGGWRLRNIRRGLALLSTRDG------- 136
F D FSFLP GWRLR++R GLALLS+
Sbjct: 72 FLPAATAVAAAVARAS------DFAFSFLPDHAAGWRLRDVRHGLALLSSSSSSSYLSPL 125
Query: 137 GGGCFFPDVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXX 196
G FFPDVVVCDP+ RR+ ++P IPDDL A +RR + FDYLLAPA R
Sbjct: 126 GDRGFFPDVVVCDPMRRRHVRVPPIPDDLTAGVRRIAV--EHFDYLLAPAGRD------- 176
Query: 197 DSSFKVVCRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRCVHRCVYWLT 256
SSF+VVCRP+L ++CD+TVFVFSSGA WRAA L + AT P+ VH VYW T
Sbjct: 177 GSSFRVVCRPKLPKQCDVTVFVFSSGAAFWRAAVLDACAATEKLFL--PQSVHGYVYWRT 234
Query: 257 RFLDRLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGE-DRLGVFN----LDVHNV 311
LL+LDT +M+ F N + I EA E RL VFN + VH V
Sbjct: 235 HSSGTLLMLDTRDMDF-FFVN--------IQTNKCVIGEAEEVGRLAVFNTIVDVGVHKV 285
Query: 312 NLLSRAIRGSADEQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXXQSDPITDG 371
+LS+AIRG ADE WRHD+TIPLLPGY WR A +GY+ S P
Sbjct: 286 EILSKAIRGGADEPWRHDRTIPLLPGYK-WRAARMA--EGYLLLHGIVGNNSWSTPGIQ- 341
Query: 372 LQYFSLDLKTFRLERLCPMTIYQARNSPT-ELYTSFPPPLSLSSI 415
LQ+F+LDLKT +LE LC + P +LY SFPPPLSLSSI
Sbjct: 342 LQHFTLDLKTLKLESLCDSISRGRHHHPQFDLYRSFPPPLSLSSI 386
>Os07g0554500 Cyclin-like F-box domain containing protein
Length = 414
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 164/416 (39%), Gaps = 48/416 (11%)
Query: 24 DEVLEEIFXXXXXXXXXXXXXXXXXTFRRLITARAFXXXXXXXXXXXXXGFFKREGPSCE 83
D++L E+ +FRR+ T AF GF G
Sbjct: 23 DDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLRRARALHPPSLLGFCASPG---- 78
Query: 84 FFXXXXXXXXXXXXXXXXXXXXDLTFSFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFP 143
F D FSFLP +P W +R++ G LL G GG
Sbjct: 79 GFHPAEPPHPSAPAARAVLRAADFGFSFLP-SPLSWVVRDVLDGRFLLDRDGGEGGAALR 137
Query: 144 DVVVCDPLHRRYAQIPQIPDDLAAPIR---RSGSLPKG-FDYLLAP-ARRXXXXXXXXDS 198
+ VCDPL RRY+ +PQIP+DLAA +R R G P G FD AP ++
Sbjct: 138 ILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPNGRFDTFFAPIGEEERAAAAVAET 197
Query: 199 SFKVVCRPRLTEECDITVFVFSSGAGIWRAATLGSSLATAISVTSRPRC--------VHR 250
SFKV+ + ++ + FVFSS G WR AT SRP C +
Sbjct: 198 SFKVIWIAQCPDK--LVAFVFSSVTGQWR-ATASPCWGDLSPAFSRPACRSLLRRSYAYG 254
Query: 251 CVYWLTRFLDRLLILDTDEMELSMFD--NFPPSTGFVLNHTTAAIAEAGEDRLGVFN--- 305
C YW+ LL+LD +M S+ + PP V AI EAGE ++G+F
Sbjct: 255 CFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPGRDIV----ECAIVEAGEGKIGMFAFCN 310
Query: 306 -LDVHNVNLLSRAIR--GSADEQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXX 362
+D++ + L S ++ G +W + I L+P +R + +
Sbjct: 311 CIDIYALELYSTTMQNEGRVASKWSFESAI-LMPSRDGFRVLGVTGKE----------LC 359
Query: 363 XQSDPITDGLQY---FSLDLKTFRLERLCPMTIYQARNSPTELYTSFPPPLSLSSI 415
Q PI Y FS + +LE I R S LY +PP LS SI
Sbjct: 360 LQVSPICVSGCYLLEFSTNPSCKKLE-FVRRVIRGVRTSLPFLYVGYPPSLSSPSI 414
>Os04g0258900 Cyclin-like F-box domain containing protein
Length = 408
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 131/330 (39%), Gaps = 38/330 (11%)
Query: 110 SFLPATPGGWRLRNIRRGLALLSTRDGGGGCFFPDVVVCDPLHRRYAQIPQIPDDLAAPI 169
SFLP W LR+ R G LL GG F DV VCDPL RRY +P IPDDLAA +
Sbjct: 93 SFLPPPARAWLLRDHRDGRFLLDRALAGGSTAFTDVAVCDPLFRRYVLLPPIPDDLAASV 152
Query: 170 RRSGSLPKGFDYLLAPARRXXXXXXXXDSS-----FKVV----CRPRLTEECDITVFVFS 220
+ G L + + D+ F V+ CR +L F FS
Sbjct: 153 QNPYLQCGGDGGLQSRSSEIFLASCGSDAGGEEPLFAVIWMACCRGKL------VAFFFS 206
Query: 221 SGAGIWRAAT------LGSSLATAISVTSRPRCVHRCVYWLTRFLDRLLILDTDEMELSM 274
S + WRA + L + + + R H C YW+ R L+LDT ME +
Sbjct: 207 SESQQWRALSPPEHYALSTRRVMGVRLGQRNH-AHGCFYWMITLTHRWLVLDTRRMEFLV 265
Query: 275 FDNFPPSTGFVLNHTTAAIAEAGEDRL------GVFNLDVHNVNLLSRAIRGSADEQWRH 328
D P +G + + I D VF D V + + S Q +
Sbjct: 266 VDISPVLSGRAMMFSNQIITLESMDGWTIVVVADVFRSDKRCVLYFYKFMYFSDRWQLQS 325
Query: 329 DKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXXQSDPITDGLQYFSLDLKTFRLER-- 386
+P GY + ++ Y+ DP+ YF D+KT +L R
Sbjct: 326 KINLPEEWGYRFRGIIGASEC--YLFIKLDHPKQNLGDPVQQNAMYFMFDIKTMQLGRFS 383
Query: 387 -LCPMTIYQARNSPTELYTSFPPPLSLSSI 415
+C T+ +A LYT FPP SL S+
Sbjct: 384 EICSGTVSEA-----YLYTGFPPSQSLPSV 408
>Os02g0199600 Cyclin-like F-box domain containing protein
Length = 434
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 137/321 (42%), Gaps = 33/321 (10%)
Query: 118 GWRLRNIRRGLALLSTRDGGGGCFFPDVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPK 177
GW +R+ R G LL FP++ VCDPL RRY +P IP +LAA + R +
Sbjct: 124 GWIVRDHRDGRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIG 183
Query: 178 G---FDYLLAPARRXXXXXXXXDSSFKVVCRPRLTEECDITVFVFSSGAGIWRA------ 228
G + LAP + +F V+ R + + F F+S G WRA
Sbjct: 184 GRRRCEPFLAPCDADADADAESEPAFAVIWTARCPRK--VVAFAFASRDGRWRALPSPEC 241
Query: 229 ---ATLGSSLATAI-SVTSRPRCVHRCVYWLTRFLDRLLILDTDEMELSMFDNFPPSTGF 284
+ S + +V +R H C YWL R L+LDT ME+++ P +
Sbjct: 242 FVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITV-KQIPSPACY 300
Query: 285 VLNHTTAAIAEAGEDRLGVFNLDVHNVN-----LLSRAIRGSADEQWRHDKTIPL-LPGY 338
H A+ E + ++GVF D + + G +WR ++T+PL P
Sbjct: 301 WEEHV--AVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAA 358
Query: 339 SIWRFVNHADVDG-YIXXXXXXXXXXQSDPITDGLQYFSLDLKTFRLERLCPMTIYQARN 397
+ A +G I + + ++ + +D+K+F LE +C +AR
Sbjct: 359 HGRPYSIRAAANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMIC-----RARC 413
Query: 398 SPTEL---YTSFPPPLSLSSI 415
+ ++ Y FPP LSL ++
Sbjct: 414 AAGDIAWAYFGFPPLLSLPTV 434
>Os07g0554100
Length = 396
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 109 FSFLPATPGGWRLRNIRRGLALLS--TRDGGGGC----FFPDVVVCDPLHRRYAQIPQIP 162
SFLP+ G W +R++R G L+ T+ GG F ++ VCDPL RR+ +P IP
Sbjct: 99 LSFLPSPAGSWMVRDVRGGRVLVDRDTKAETGGSEKPLVFTEIAVCDPLRRRFLLLPPIP 158
Query: 163 DDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXXDSSFKVVCRPRLTEECDITVFVFSSG 222
DDLAA + R + D P D+SFKV+ + + I FVF+S
Sbjct: 159 DDLAASVDRPVRV--HLDRWCEPFLAPHIEEEEDDTSFKVIWMAQC--KAKIIAFVFNSS 214
Query: 223 AGIWRAATL--------GSSLATAIS-------------VTSRPRCVHRCVYW-LTRFLD 260
G W A G+ L+ S V S R C W + R +
Sbjct: 215 TGQWLAGASPSTTDLFNGAGLSPPPSSSSPSLVFSSPGRVFSSRRYACGCFCWGILRTM- 273
Query: 261 RLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNL--DVHNVNLLSRAI 318
LL+LDT M+ S+ + P G AI EAGE G+F L V L +I
Sbjct: 274 -LLVLDTRLMKFSIAEPPPVCLG-----GPTAIVEAGEGMTGIFALRGSVGGTFDLHYSI 327
Query: 319 RGS--ADEQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXXQSDPITDGLQYFS 376
G A + + +K IPL GY R+ ++ ++ + P L+ FS
Sbjct: 328 WGKEGATRREQMEKIIPLDHGY---RYYIRGAMEKHLLLARSRGEGEEDTPEEPDLECFS 384
Query: 377 LDLKTFRLERL 387
LD+KT +LE L
Sbjct: 385 LDVKTLQLEPL 395
>Os07g0554900 Cyclin-like F-box domain containing protein
Length = 428
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 165/425 (38%), Gaps = 59/425 (13%)
Query: 24 DEVLEEIFXXXXXXXXXXXXXXXXXTFRRLITARAFXXXXXXXXXXXXXGFFKREGPSCE 83
D++LEEIF FRR+IT +F G R+ +
Sbjct: 22 DDLLEEIFIRLDTPADLARASSSCPPFRRVITDPSFLRRYRALYPPPLLGILPRDADA-- 79
Query: 84 FFXXXXXXXXXXXXXXXXXXXXDLTFSFLPATPGGWRLRNIRRGLALLSTR-------DG 136
DL+ +FLP WR R++R G L S D
Sbjct: 80 -----FLPAEPPHRSAPAAGAVDLSCAFLPDR-HTWRRRDVRDGRILFSREEEYYAPDDD 133
Query: 137 GGGCFFPDVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXX 196
G D+ VCDP RYA + +IP DL P+ G F+ LAPA
Sbjct: 134 GADVLLMDLAVCDPFSGRYAILTEIPQDLIDPLDLEGQSFLCFEPFLAPATAADDDEDEV 193
Query: 197 -DSSFKVVCRPR-LTEECDITVFVFSSGAGIWRA------ATLGSSLATAISVTSRPRCV 248
+SF+V+ R LT+ + F+F AG WRA A L + +T ++ V
Sbjct: 194 GGASFRVMYMARGLTK---LMAFIFPWEAGEWRAVEYDGWAALINGTSTWLAEMFWRFHV 250
Query: 249 HRCVYWLTRFLDRLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNL-- 306
H + WL + ++LLILDT +LS + P S E E +LG+F L
Sbjct: 251 HGNICWLLDWANKLLILDTTTNQLSTIEMVPGSW-----KKDIVFLETEEGQLGLFVLIN 305
Query: 307 DVHNVNLLSRAIRGSAD---EQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXX 363
+ + L AI D +QWR + I L Y W + N +DG
Sbjct: 306 NFYTSFDLYYAIWQDNDKGVKQWRVIEAIQLPLNY--W-YENLLGIDGGYVLLQGIPKGS 362
Query: 364 QSDPITDGLQY-----------------FSLDLKTFRLERLCPMTIYQARNSPTELYTSF 406
+S Q FS+++KTFR+ER C T + + + L+TS+
Sbjct: 363 KSSWQASSRQNGSSQASESSSEVPEHVCFSVEVKTFRVERFC-GTNHAIKTA--NLFTSY 419
Query: 407 PPPLS 411
PP LS
Sbjct: 420 PPSLS 424
>Os07g0555100 Conserved hypothetical protein
Length = 402
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 136/322 (42%), Gaps = 56/322 (17%)
Query: 106 DLTFSFLPATPG----GWRLRNIRRGLALLSTR----DGGGGCF----FPDVVVCDPLHR 153
D + F+P P GW + R G L+ ++ D GG F F + VCDPL +
Sbjct: 80 DFEYGFVPWVPEEEAWGWFPLDARDGRVLIQSKYFPDDPDGGDFPRPRFMNYAVCDPLFK 139
Query: 154 RYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXXDSSFKVVCRPRLTEECD 213
RY +P +PDDL A GSL F LAP++ D+SF+V+C R +
Sbjct: 140 RYVMLPPVPDDLTA---NEGSL-VDFGLCLAPSQE-----DEADTSFRVICVARYN--TN 188
Query: 214 ITVFVFSSGAGIWRAATLGSSLATAISVTSRP---------RCVHRCVYWLTRFLDRLLI 264
+ FVFSS W +GSS + T P CV C YW D++L+
Sbjct: 189 LVAFVFSSVTRQW---GIGSSSTWSSLGTEEPPNRHGLSCFDCVDGCFYWTVPSADKILV 245
Query: 265 LDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNLDVHNVN-------LLSRA 317
LD +ME S+ + V + A IA E G+ + + N + ++
Sbjct: 246 LDAIKMEFSVIN----YAHRVEDGFRACIAVDTEGTPGMLTVGEYLGNREFRFSRIAKQS 301
Query: 318 IRGSADEQWRHDKTIPLLPGYSIWRFVNHADVDGYIXXXXXXXXXXQSDPITDGL----- 372
R S +E R + I LP + ++ +G+I D ++ L
Sbjct: 302 DRESPNE--RLSENIIQLPS-NCNKYFTLGAAEGFIFLRGIPEEEKVEDSSSEDLYMDPE 358
Query: 373 --QYFSLDLKTFRLERLCPMTI 392
+Y+SL++KT E +C M +
Sbjct: 359 EIEYYSLNVKTVEFEMVCAMDM 380
>Os07g0554200 Cyclin-like F-box domain containing protein
Length = 409
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 120/298 (40%), Gaps = 28/298 (9%)
Query: 24 DEVLEEIFXXXXXXXXXXXXXXXXXTFRRLITARAFXXXXXXXXXXXXXGFFKREGPSCE 83
D++L E+ +FRR++T RAF GF +
Sbjct: 15 DDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGASPGAGG 74
Query: 84 F-FXXXXXXXXXXXXXXXXXXXXDLTFSFLPAT-PGGWRLRNIRRGLALLS--TRDGGGG 139
F F D FSFLP+ P GW +R++ G LL + G
Sbjct: 75 FHFHPAEPPHPSAPAARGVLRAADFGFSFLPSPDPLGWVVRDVLGGRFLLDRDVVEEGAA 134
Query: 140 CFFPDVVVCDPLHRRYAQIPQIPDDLAA--PIRRSGSLPKGFDYLLAPARRXXXXXXXXD 197
+ VCDPL RR+ +PQIP DLAA +R+S + D AP +
Sbjct: 135 AASRILAVCDPLFRRHLLLPQIPQDLAAASALRQS----RRGDTFFAPIGEEECVAAVAE 190
Query: 198 SSFKVVCRPRLTEEC--DITVFVFSSGAGIWRAATLGSSLATAISVTSRPRC-------- 247
+SFKV+ EC + FVFSS G WR AT SRP C
Sbjct: 191 TSFKVI----WIAECADKLVAFVFSSVTGQWR-ATASVCWGDLSPAFSRPACRSMSRRSY 245
Query: 248 VHRCVYWLT-RFLDRLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVF 304
+ C YW+ + LL+LD M+ S+ + PS+ + AI E GE ++G+F
Sbjct: 246 AYGCFYWMMGDSVKNLLVLDMRRMDFSVLEL--PSSAPGHDIVECAIVEEGEGKIGMF 301
>Os07g0555300 Conserved hypothetical protein
Length = 253
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 144 DVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARRXXXXXXXXDSSFKVV 203
D+ VCDP+ RRY +P IPDDL + G L F+ LAPA + +SF+VV
Sbjct: 3 DLAVCDPVSRRYVILPPIPDDLITSGEQEGLL--VFETFLAPAAKEEEEMVGT-TSFRVV 59
Query: 204 CRPRLTEECDITVFVFSSGAGIWRAA-TLGSSLATA---ISVTSR------PRCVHRCVY 253
R E + +FVFSS W ++ ++ SL TA +S T++ PR VY
Sbjct: 60 ARANY--ESKVVIFVFSSLTEEWHSSRSVSWSLLTADPWLSSTAQAHLWFFPRYYAHFVY 117
Query: 254 WLTRFLDRLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVFNL 306
W+ +D LL+LDT +M NF F AI E ED +G F L
Sbjct: 118 WVMHLVDMLLVLDTSKMAFFTI-NFQWDRDF-------AILETEEDMIGAFCL 162
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.142 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,274,184
Number of extensions: 494018
Number of successful extensions: 1268
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1240
Number of HSP's successfully gapped: 11
Length of query: 415
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 312
Effective length of database: 11,657,759
Effective search space: 3637220808
Effective search space used: 3637220808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)