Os10g0135500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0135500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.31 | 0.513 | 6.45 | 0.0533 | 0.807 | -1.31 | -0.945 | -1.02 | -0.229 | 7.2 | 25.13 | 93 | -- | -- |
| 120.96 | 0.512 | 6.47 | -0.0892 | 0.828 | -1.22 | -0.879 | -- | -0.262 | 7.12 | 25.56 | 92 | -- | -- |
| 121.49 | 0.513 | 6.45 | 0.0281 | 0.827 | -1.34 | -- | -1.04 | -0.242 | 6.91 | 25.4 | 94 | -- | -- |
| 123.06 | 0.52 | 6.48 | -0.11 | 0.815 | -1.23 | -- | -- | -0.286 | 6.58 | 26.42 | 94 | -- | -- |
| 148.78 | 0.571 | 6.46 | 0.0224 | -- | -1.59 | -- | -1.15 | -0.167 | -- | 22.95 | 12 | -- | -- |
| 143.02 | 0.561 | 6.41 | 0.206 | 0.773 | -- | -0.967 | -- | -0.0164 | 8.16 | -- | -- | -- | -- |
| 145.87 | 0.566 | 6.41 | 0.178 | 0.774 | -- | -- | -- | -0.0159 | 8.16 | -- | -- | -- | -- |
| 150.5 | 0.574 | 6.47 | -0.0993 | -- | -1.43 | -- | -- | -0.193 | -- | 23.11 | 6 | -- | -- |
| 123.35 | 0.52 | 6.47 | -- | 0.81 | -1.19 | -- | -- | -0.265 | 6.63 | 26.42 | 94 | -- | -- |
| 178.88 | 0.625 | 6.43 | 0.184 | -- | -- | -- | -- | -0.00674 | -- | -- | -- | -- | -- |
| 146.71 | 0.567 | 6.42 | -- | 0.775 | -- | -- | -- | -0.0357 | 8.14 | -- | -- | -- | -- |
| 150.74 | 0.574 | 6.47 | -- | -- | -1.39 | -- | -- | -0.178 | -- | 23.1 | 4 | -- | -- |
| 179.78 | 0.626 | 6.44 | -- | -- | -- | -- | -- | -0.0272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 3 | 116.57 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 26 | 118.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 20 |
| 31 | 118.49 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 22 |
| 32 | 118.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 8 | 23 |
| 70 | 119.11 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 71 | 119.12 | temperature | 20 | 90 | > th | dose dependent | sin | 11 | NA |
| 89 | 119.34 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 107 | 119.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 110 | 119.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 112 | 119.53 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 113 | 119.53 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 117 | 119.55 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 119 | 119.56 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 126 | 119.59 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 159 | 119.86 | temperature | 25 | 90 | < th | dose dependent | rect. | 14 | 15 |
| 178 | 119.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 224 | 120.35 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 239 | 120.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 315 | 120.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 353 | 121.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 522 | 121.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 534 | 121.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 558 | 121.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 561 | 121.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 578 | 121.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 594 | 121.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 618 | 121.89 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 727 | 122.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 735 | 122.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 742 | 122.15 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 761 | 122.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 778 | 122.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 807 | 122.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |